Metabolic pathways are enzyme-mediated biochemical reactions that lead to biosynthesis (anabolism) or breakdown (catabolism) of natural product small molecules within a cell or tissue. In each pathway, enzymes catalyze the conversion of substrates into structurally similar products. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation. Metabolism maintains the living state of the cells and the organism.

Proteases are used throughout an organism for various metabolic processes. Proteases control a great variety of physiological processes that are critical for life, including the immune response, cell cycle, cell death, wound healing, food digestion, and protein and organelle recycling. On the basis of the type of the key amino acid in the active site of the protease and the mechanism of peptide bond cleavage, proteases can be classified into six groups: cysteine, serine, threonine, glutamic acid, aspartate proteases, as well as matrix metalloproteases. Proteases can not only activate proteins such as cytokines, or inactivate them such as numerous repair proteins during apoptosis, but also expose cryptic sites, such as occurs with β-secretase during amyloid precursor protein processing, shed various transmembrane proteins such as occurs with metalloproteases and cysteine proteases, or convert receptor agonists into antagonists and vice versa such as chemokine conversions carried out by metalloproteases, dipeptidyl peptidase IV and some cathepsins. In addition to the catalytic domains, a great number of proteases contain numerous additional domains or modules that substantially increase the complexity of their functions.

Imbalances in metabolic activities have been found to be critical in a number of pathologies, such as cardiovascular diseases, inflammation, cancer, and neurodegenerative diseases.

References:
[1] Turk B, et al. EMBO J. 2012 Apr 4;31(7):1630-43.
[2] Eatemadi A, et al. Biomed Pharmacother. 2017 Feb;86:221-231.


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SCH-42354

SCH-42354 is a potent, orally active neutral endopeptidase (NEP) inhibitor, is the pharmacologically active form of the prodrug SCH-42495. SCH-42354 inhibits the hydrolysis of NEP to enhance the activity of atrial natriuretic peptide (ANP). SCH-42354 inhibits hydrolysis of leu-enkephalin and ANF with IC50 values of 8.3 nM and 10.0 nM, respectively. SCH-42354 has antihypertensive activity[1][2].

  • CAS Number: 144505-58-8
  • MF: C16H23NO3S2
  • MW: 341.49
  • Catalog: Neprilysin
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

Ro-15-2041

Ro 15-2041 is a selective platelet phosphodiesterase inhibitor with antithrombotic properties.

  • CAS Number: 77448-87-4
  • MF: C12H12BrN3O
  • MW: 294.147
  • Catalog: Phosphodiesterase (PDE)
  • Density: 1.7±0.1 g/cm3
  • Boiling Point: 375.8±52.0 °C at 760 mmHg
  • Melting Point: N/A
  • Flash Point: 181.1±30.7 °C

Sophoflavescenol

Sophoflavescenol is a prenylated flavonol, which shows great inhibitory activity with IC50 of 0.013 μM against Phosphodiesterase 5 (PDE5), and also inhibits RLAR, HRAR, AGE, BACE1, AChE and BChE with IC50s of 0.30 µM, 0.17 µM, 17.89 µg/mL, 10.98 µM, 8.37 µM and 8.21 µM, respectively.

  • CAS Number: 216450-65-6
  • MF: C21H20O6
  • MW: 368.380
  • Catalog: Phosphodiesterase (PDE)
  • Density: 1.359±0.06 g/cm3
  • Boiling Point: 631.8±55.0 °C at 760 mmHg
  • Melting Point: 273-275 ºC
  • Flash Point: 226.2±25.0 °C

3-O-Methylquercetin

3-O-Methylquercetin (3-MQ), a main constituent of Rhamnus nakaharai, inhibits total cAMP and cGMP-phosphodiesterase (PDE) of guinea pig trachealis. 3-O-Methylquercetin (3-MQ) exhibits IC50 values of 31.9 μM, 86.9 μM, 18.6 μM and 1.6 μM for PDE1, PDE5, PDE2 and PDE4, respectively[1].

  • CAS Number: 1486-70-0
  • MF: C16H12O7
  • MW: 316.262
  • Catalog: Phosphodiesterase (PDE)
  • Density: 1.7±0.1 g/cm3
  • Boiling Point: 643.0±55.0 °C at 760 mmHg
  • Melting Point: N/A
  • Flash Point: 244.7±25.0 °C

Obtusifoliol

Obtusifoliol is a specific CYP51 inhibitor, Obtusifoliol shows the affinity with Kd values of 1.2 µM and 1.4 µM for Trypanosoma brucei (TB) and human CYP51, respectively[1].

  • CAS Number: 16910-32-0
  • MF: C30H50O
  • MW: 426.71700
  • Catalog: Cytochrome P450
  • Density: 0.98g/cm3
  • Boiling Point: 501.3ºC at 760mmHg
  • Melting Point: N/A
  • Flash Point: 221.9ºC

Antitumor agent-87

Antitumor agent-87 is a potent antitumor agent. Antitumor agent-87 shows a high affinity for CYP1A1 with a Ki value of 0.23 µM. Antitumor agent-87 shows antiproliferative activity. Antitumor agent-87 induces cell cycle arrest at the G2/M phase. Antitumor agent-87 show antitumoral activity[1].

  • CAS Number: 1422527-88-5
  • MF: C22H28N2O6S
  • MW: 448.53
  • Catalog: Cytochrome P450
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

Desamide

Disulfamide, an orally active diuretic, is a carbonic anhydrase inhibitor with the IC50 value of 0.07 μM. Disulfamide leads to diuresis by inhibiting carbonic anhydrase and preventing the reabsorption of sodium and bicarbonate in the proximal tubule[1].

  • CAS Number: 671-88-5
  • MF: C7H9ClN2O4S2
  • MW: 284.74000
  • Catalog: Carbonic Anhydrase
  • Density: 1.621g/cm3
  • Boiling Point: 549.4ºC at 760 mmHg
  • Melting Point: N/A
  • Flash Point: 286.1ºC

NAPHTHOL AS-GR PHOSPHATE DISODIUM

Naphthol AS-GR phosphate disodium is substrates for acid and alkaline phosphatases. Naphthol AS-GR phosphate disodium has an intense green fluorescence used in histochemical studies[1].

  • CAS Number: 100929-51-9
  • MF: C22H16NNa2O5P
  • MW: 451.31900
  • Catalog: Phosphatase
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

Thiorphan-d7

Thiorphan-d7 is the deuterium labeled Thiorphan[1]. Thiorphan is a selective NEP (neprilysin) inhibitor with an IC50 of 6.9 nM[2].

  • CAS Number: 1276297-68-7
  • MF: C12H8D7NO3S
  • MW: 260.361
  • Catalog: Neprilysin
  • Density: 1.2±0.1 g/cm3
  • Boiling Point: 524.0±50.0 °C at 760 mmHg
  • Melting Point: N/A
  • Flash Point: 270.7±30.1 °C

BIS(4-METHYL-1-PIPERAZINYLTHIOCARBONYL) DISULFIDE

EWP 815 is a disulfiram analogue, is a potent inhibitor of Ins(1,4)P2 phosphatase and Ins(1,4,5)P3 5-phosphatase. EWP 815 also inhibits enzyme dopamine β-hydroxylase activity[1][2].

  • CAS Number: 20231-01-0
  • MF: C12H22N4S4
  • MW: 350.59000
  • Catalog: Phosphatase
  • Density: 1.339g/cm3
  • Boiling Point: 450.5ºC at 760 mmHg
  • Melting Point: 142ºC
  • Flash Point: 226.3ºC

TPN729

TPN729 is a novel potent, selective phosphodiesterase type 5 (PDE5) inhibitor with IC50 of 2.28 nM, shows better selectivity profile 2.5 times higher than sildenafil against PDE6 and 500 times higher than tadalafil against PDE11; selectively inhibits PDE5 and blocks the degradation of cyclic guanosine monophosphate, and is a promising PDE5 inhibitor providing fewer side effects and better compliance.

  • CAS Number: 936951-20-1
  • MF: C25H36N6O4S
  • MW: 516.661
  • Catalog: Phosphodiesterase (PDE)
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

RPR107393 free base

RPR107393 free base is a selective squalene synthase inhibitor, which inhibits rat liver microsomal squalene synthase with an IC50 of 0.8±0.2 nM.

  • CAS Number: 197576-78-6
  • MF: C22H22N2O
  • MW: 330.42
  • Catalog: Farnesyl Transferase
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

Asp-AMS

Asp-AMS, an analogue of aspartyl-adenylate, is an aspartyl-tRNA synthetase inhibitor and also a strong competitive inhibitor of the mitochondrial enzyme.

  • CAS Number: 828288-98-8
  • MF: C14H19N7O9S
  • MW: 461.41
  • Catalog: Mitochondrial Metabolism
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

Lopinavir Metabolite M-1

Lopinavir Metabolite M-1, an active metabolite of Lopinavir, inhibits HIV protease with a Ki of 0.7 pM. Lopinavir Metabolite M-1 has antiviral activities in vitro[1][2].

  • CAS Number: 192725-39-6
  • MF: C37H46N4O6
  • MW: 642.78400
  • Catalog: HIV Protease
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

Z-FA-FMK

(S,S)-Z-FA-FMK is a cell-permeable, irreversible cathepsin B inhibitor. (S,S)-Z-FA-FMK blocks LPS-induced production of IL-1α and IL-1β. (S,S)-Z-FA-FMK can be used as a negative control for caspase-1 and caspase-2 inhibitors because it lacks an aspartic acid residue at the P1 position[1][2].

  • CAS Number: 105637-38-5
  • MF: C21H23FN2O4
  • MW: 386.41700
  • Catalog: Cathepsin
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

IACS-15414

IACS-15414 is a potent and orally bioavailable SHP2 inhibitor with an IC50 value of 122 nM.

  • CAS Number: 2411321-29-2
  • MF: C20H24Cl2N4O2
  • MW: 423.34
  • Catalog: Phosphatase
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

DCN1-UBC12-IN-1

DCN1-UBC12-IN-1 is potent and selective DCN1-UBC12 inhibitor with an IC50 of 2.86 nM. Anticardiac fibrotic effect[1].

  • CAS Number: 2374827-31-1
  • MF: C24H23N7O3S2
  • MW: 521.61
  • Catalog: E1/E2/E3 Enzyme
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

Displurigen

Displurigen (NSC375009) disrupts human embryonic stem cell pluripotency by targeting HSPA8. Displurigen inhibits ATPase activity of HSP70 (IC50 = 225 μM)[1].

  • CAS Number: 96156-26-2
  • MF: C15H10O4S
  • MW: 286.30300
  • Catalog: HSP
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

Spiro[8H-naphth[2',1':4,5]indeno[2,1-b]furan-8,2'-[2H]pyran] alpha-D-glucopyranoside deriv.

Polyphyllin C (compound 2) is a spirostanol saponin. Polyphyllin C exhibits mild (IC50=36.87 µM) activities against the tyrosinase and moderate (IC50=1.59 µg/mL) antileishmanial activities[1][2].

  • CAS Number: 76296-71-4
  • MF: C39H62O12
  • MW: 722.902
  • Catalog: Tyrosinase
  • Density: 1.3±0.1 g/cm3
  • Boiling Point: 849.1±65.0 °C at 760 mmHg
  • Melting Point: 189-192 °C
  • Flash Point: 467.3±34.3 °C

JNJ-42041935

JNJ-42041935 is a potent, competitive and selective inhibitor of prolyl hydroxylase PHD; inhibits PHD1, PHD2, and PHD3 with pKi values of 7.91±0.04, 7.29 ±0.05, and 7.65±0.09, respectively.

  • CAS Number: 1193383-09-3
  • MF: C12H6ClF3N4O3
  • MW: 346.649
  • Catalog: HIF/HIF Prolyl-Hydroxylase
  • Density: 1.8±0.1 g/cm3
  • Boiling Point: 555.9±60.0 °C at 760 mmHg
  • Melting Point: N/A
  • Flash Point: 290.0±32.9 °C

DPP-4/GPR119 modulator 2

DPP-4/GPR119 modulator 2 (Compound 20i) is a dipeptidyl peptidase IV (DPP-IV) inhibitor and GPR119 agonist with an IC50 of 0.22 µM for DPP-IV and an EC50 of 0.95 µM for GPR119. DPP-4/GPR119 modulator 2 can be used for diabetes research[1].

  • CAS Number: 2010927-65-6
  • MF: C30H40N8O3
  • MW: 560.69
  • Catalog: GPR119
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

ent-11α-Hydroxy-15-oxokaur-16-en-19-oic acid

ent-11α-Hydroxy-15-oxokaur-16-en-19-oic acid is an anti-melanin synthesis tyrosinase inhibitor, which can be isolated from Pteris fern. ent-11α-Hydroxy-15-oxokaur-16-en-19-oic acid regulates the melanogenesis transcription factor microphthalmia-associated transcription factor (MITF). The 11α-OH, 15-oxo and 16-en moieties of ent-11α-Hydroxy-15-oxokaur-16-en-19-oic acid are key fragments that inhibit melanin synthesis. The 19-COOH moiety has been implicated in the inhibition of cytotoxicity associated with 11α-OH KA and related compounds[1].

  • CAS Number: 57719-81-0
  • MF: C20H28O4
  • MW: 332.43
  • Catalog: Tyrosinase
  • Density: 1.2±0.1 g/cm3
  • Boiling Point: 516.6±50.0 °C at 760 mmHg
  • Melting Point: N/A
  • Flash Point: 280.3±26.6 °C

S18-000003

S18-000003 is a potent orally bioavailable retinoic acid receptor-related orphan receptor-gamma-t (RORγt) inhibitor with an IC50 of 29 nM. S18-000003 inhibits IL-17 production[1].

  • CAS Number: 2068119-11-7
  • MF: C26H25F3N2O4S
  • MW: 518.55
  • Catalog: ROR
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

HIF-2α-IN-6

HIF-2α-IN-6 (117) is a HIF-2α inhibitor[1].

  • CAS Number: 2755401-07-9
  • MF: C15H13F4NO3S
  • MW: 363.33
  • Catalog: HIF/HIF Prolyl-Hydroxylase
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

UbcH5c-IN-1

UbcH5c-IN-1 (compound 6d) is a potent and selective small-molecule inhibitor of Ubiquitin-conjugating enzyme UbcH5c, with a Kd of 283 nM for E2 UbcH5c-IN-1 by covalent binding with Cys85. A promising lead compound for the development of new antirheumatoid arthritis (RA) agent[1].

  • CAS Number: 2123480-72-6
  • MF: C22H21BrO3
  • MW: 413.30
  • Catalog: E1/E2/E3 Enzyme
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

Asperphenamate

Asperphenamate, a fungal metabolite of Aspergillus flatiipes with anti-cancer effect, exhibits IC50 values of 92.3 μM, 96.5 μM and 97.9 μM in T47D, MDA-MB-231 and HL-60 cells, respectively[1][2].

  • CAS Number: 63631-36-7
  • MF: C32H30N2O4
  • MW: 506.59200
  • Catalog: Autophagy
  • Density: 1.198g/cm3
  • Boiling Point: 774.3ºC at 760 mmHg
  • Melting Point: N/A
  • Flash Point: 422.1ºC

p-aminophenylmercuric acetate

p-Aminophenylmercuric acetate is an organomercurial activator of matrix metalloproteinases (MMP). P-Aminophenylmercuric acetate participates in the activation and inhibition of MMP-8 by attacking protein sulfhydryl or inducing cysteine switching reaction. p-Aminophenylmercuric acetate promotes the shedding of betacellulin precursor (pro-BTC). p-Aminophenylmercuric acetate influences the binding of agonists and antagonists to the opiate receptor[1][2][3].

  • CAS Number: 6283-24-5
  • MF: C8H9HgNO2
  • MW: 351.75
  • Catalog: Cathepsin
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: 163-165 °C(lit.)
  • Flash Point: N/A

A939572

A939572 is a potent, and orally bioavailable SCD1 inhibitor with IC50 values of <4 nM and 37 nM for mSCD1 and hSCD1, respectively.

  • CAS Number: 1032229-33-6
  • MF: C20H22ClN3O3
  • MW: 387.86000
  • Catalog: Stearoyl-CoA Desaturase (SCD)
  • Density: 1.302 g/cm3
  • Boiling Point: 633.5ºC at 760 mmHg
  • Melting Point: N/A
  • Flash Point: 336.9ºC

PX-478 2HCl

PX-478 is an antitumor inhibitor of hypoxia-inducible factor-1α (HIF-1α).

  • CAS Number: 685898-44-6
  • MF: C13H20Cl4N2O3
  • MW: 394.121
  • Catalog: Autophagy
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

Mca-Pro-Leu-Ala-Cys(Mob)-Trp-Ala-Arg-Dap(Dnp)-NH2 trifluoroacetate salt

Mca-Pro-Leu-Ala-Cys(Mob)-Trp-Ala-Arg-Dap(Dnp)-NH2 is a fluorogenic substrate for matrix metalloproteinase-14 (MMP-14).

  • CAS Number: 1926163-82-7
  • MF: C66H82N16O17S
  • MW: 1403.519
  • Catalog: MMP
  • Density: 1.5±0.1 g/cm3
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A