Metabolic pathways are enzyme-mediated biochemical reactions that lead to biosynthesis (anabolism) or breakdown (catabolism) of natural product small molecules within a cell or tissue. In each pathway, enzymes catalyze the conversion of substrates into structurally similar products. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation. Metabolism maintains the living state of the cells and the organism.

Proteases are used throughout an organism for various metabolic processes. Proteases control a great variety of physiological processes that are critical for life, including the immune response, cell cycle, cell death, wound healing, food digestion, and protein and organelle recycling. On the basis of the type of the key amino acid in the active site of the protease and the mechanism of peptide bond cleavage, proteases can be classified into six groups: cysteine, serine, threonine, glutamic acid, aspartate proteases, as well as matrix metalloproteases. Proteases can not only activate proteins such as cytokines, or inactivate them such as numerous repair proteins during apoptosis, but also expose cryptic sites, such as occurs with β-secretase during amyloid precursor protein processing, shed various transmembrane proteins such as occurs with metalloproteases and cysteine proteases, or convert receptor agonists into antagonists and vice versa such as chemokine conversions carried out by metalloproteases, dipeptidyl peptidase IV and some cathepsins. In addition to the catalytic domains, a great number of proteases contain numerous additional domains or modules that substantially increase the complexity of their functions.

Imbalances in metabolic activities have been found to be critical in a number of pathologies, such as cardiovascular diseases, inflammation, cancer, and neurodegenerative diseases.

References:
[1] Turk B, et al. EMBO J. 2012 Apr 4;31(7):1630-43.
[2] Eatemadi A, et al. Biomed Pharmacother. 2017 Feb;86:221-231.


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RS-25344 hydrochloride

RS-25344 hydrochloride is a selective cAMP-phosphodiesterase 4 (PDE 4; PDE IV) inhibitor with an IC50 of 0.28 nM in human lymphocytes. RS-25344 hydrochloride has only weak inhibitory effects on PDE I, II, III (IC50 of >100 μM, 160 μM, 330 μM, respectively). RS-25344 hydrochloride has anti-inflammatory, memory- and cognition enhancing, and antineoplastic effects[1][2].

  • CAS Number: 152815-28-6
  • MF: C19H14ClN5O4
  • MW: 411.799
  • Catalog: Phosphodiesterase (PDE)
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

16 alpha-Hydroxytrametenolic acid

16α-Hydroxytrametenolic acid, a natural triterpene, is a potential retinoid X receptor (RXR) selective agonist[1].

  • CAS Number: 176390-68-4
  • MF: C30H48O4
  • MW: 472.71
  • Catalog: RAR/RXR
  • Density: 1.11±0.1 g/cm3(Predicted)
  • Boiling Point: 598.3±50.0 °C(Predicted)
  • Melting Point: N/A
  • Flash Point: N/A

Isotanshinone IIA

Isotanshinone IIA, an abietane-type diterpene metabolite, could non-competitively inhibit Protein Tyrosine Phosphatase 1B (PTP1B) activity with an IC50 0f 11.4 μM.

  • CAS Number: 20958-15-0
  • MF: C19H18O3
  • MW: 294.34400
  • Catalog: Phosphatase
  • Density: N/A
  • Boiling Point: 471.1±45.0 °C(Predicted)
  • Melting Point: N/A
  • Flash Point: N/A

Esaxerenone

Esaxerenone is a novel, highly potent and selective non-steroidal mineralocorticoid receptor antagonist.

  • CAS Number: 1632006-28-0
  • MF: C22H21F3N2O4S
  • MW: 466.473
  • Catalog: Mineralocorticoid Receptor
  • Density: 1.4±0.1 g/cm3
  • Boiling Point: 581.3±50.0 °C at 760 mmHg
  • Melting Point: N/A
  • Flash Point: 305.4±30.1 °C

Mevastatin

Mevastatin (Compactin; ML236B) inhibits HMGCR (HMG-CoA reductase) (Ki for acid form is 1 nM) which in turn inhibits isoprenoid biosynthesis and therefore blocks protein isoprenylation and reduces plasma cholesterol levels in humans. IC50 value: 1 nM (Ki)Target: HMGCRMevastatin induces apoptosis, arrests cancer cells in G1 phase and downregulates cdk 2, 4, and 6, cyclin D1 and E1, p21 and p27. Mevastatin suppresses TNF-induced NF-κB activation (IC50 = ~17 uM), which potentiates apoptosis in human myeloid leukemia cells and thus, may be useful in treating cancer.

  • CAS Number: 73573-88-3
  • MF: C23H34O5
  • MW: 390.513
  • Catalog: Autophagy
  • Density: 1.1±0.1 g/cm3
  • Boiling Point: 555.0±50.0 °C at 760 mmHg
  • Melting Point: 151-153 °C
  • Flash Point: 186.5±23.6 °C

(E/Z)-BCI

(E/Z)-BCI (NSC 150117) is a dual-specificity phosphatase 6 (DUSP6) inhibitor with anti-inflammatory activities. (E/Z)-BCI attenuates LPS-induced inflammatory mediators and ROS production in macrophage cells via activating the Nrf2 signaling axis and inhibiting the NF-κB pathway[1].

  • CAS Number: 15982-84-0
  • MF: C22H23NO
  • MW: 317.42
  • Catalog: Phosphatase
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

2,5-Dihydroxycinnamic Acid phenethyl ester

5-LOX-IN-2, an inhibitor of 5-lipoxygenase (5-LOX) with an IC50 of 0.33 μM, inhibits 5-LOX in a dose-dependent manner . 5-LOX-IN-2, reduces the cell viability of renal cancer cells and induces apoptosis, can be used for cancer research[1].

  • CAS Number: 179691-97-5
  • MF: C17H16O4
  • MW: 284.31
  • Catalog: 5-Lipoxygenase
  • Density: 1.3±0.1 g/cm3
  • Boiling Point: 515.5±50.0 °C at 760 mmHg
  • Melting Point: N/A
  • Flash Point: 192.2±23.6 °C

Toddacoumalone

Toddacoumalone is a natural inhibitor of phosphodiesterase 4 (PDE4) with moderate potency and imperfect drug-like properties. Toddacoumalone has the potential for the research of inflammatory diseases such as psoriasis[1].

  • CAS Number: 139750-79-1
  • MF: C31H31NO6
  • MW: 513.58
  • Catalog: Phosphodiesterase (PDE)
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

YH-306

YH-306 is a candidate drug in preventing growth and metastasis of colorectal cancer by modulating FAK signalling pathway.

  • CAS Number: 1373764-75-0
  • MF: C19H18N2O2
  • MW: 306.36
  • Catalog: Apoptosis
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

MG-262

MG-262 is a reversible proteasome inhibitor with diverse biological activities[1][2][3].

  • CAS Number: 179324-22-2
  • MF: C25H42BN3O6
  • MW: 491.42800
  • Catalog: Proteasome
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

Quinine bisulfate

Quinidine is an antiarrhythmic agent. Quinidine is a potent, orally active, selective cytochrome P450db inhibitor. Quinidine is also a K+ channel blocker with an IC50 of 19.9 μM. Quinidine can be used for malaria research[1][2][3].

  • CAS Number: 549-56-4
  • MF: C40H50N4O8S
  • MW: 746.91200
  • Catalog: Potassium Channel
  • Density: N/A
  • Boiling Point: 1136.7ºC at 760mmHg
  • Melting Point: N/A
  • Flash Point: 641.2ºC

Simeprevir

Simeprevir is a potent HCV NS3/4A protease inhibitor which suppresses HCV replication with EC50 of 8 nM.

  • CAS Number: 923604-59-5
  • MF: C38H47N5O7S2
  • MW: 749.939
  • Catalog: HCV
  • Density: 1.4±0.1 g/cm3
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

C75

C75 is a synthetic fatty-acid synthase (FASN) inhibitor; inhibits prostate cancer cells PC3 with an IC50 of 35 μM.

  • CAS Number: 218137-86-1
  • MF: C14H22O4
  • MW: 254.322
  • Catalog: Fatty Acid Synthase (FAS)
  • Density: 1.1±0.1 g/cm3
  • Boiling Point: 432.1±45.0 °C at 760 mmHg
  • Melting Point: N/A
  • Flash Point: 159.2±22.2 °C

HMB-Val-Ser-Leu-VE

HMB-Val-Ser-Leu-VE is a prototype vinyl ester inhibitor. HMB-Val-Ser-Leu-VE is against trypsin-like (T-L) proteasome activity with an IC50 of 0.033 μM[1].

  • CAS Number: 862891-04-1
  • MF: C26H39N3O7
  • MW: 505.60
  • Catalog: Ser/Thr Protease
  • Density: 1.2±0.1 g/cm3
  • Boiling Point: 754.1±60.0 °C at 760 mmHg
  • Melting Point: N/A
  • Flash Point: 409.8±32.9 °C

HIF-2α-IN-1

HIF-2α-IN-1 is a HIF-2α inhibitor has an IC50 of less than 500 nM in HIF-2α scintillation proximity assay.IC50 value: < 500 nMTarget: HIF-2α

  • CAS Number: 1799948-06-3
  • MF: C16H8F5NO4S
  • MW: 405.296
  • Catalog: HIF/HIF Prolyl-Hydroxylase
  • Density: 1.7±0.1 g/cm3
  • Boiling Point: 499.8±45.0 °C at 760 mmHg
  • Melting Point: N/A
  • Flash Point: 256.1±28.7 °C

RMC-4550

RMC-4550 is a potent, selective and allosteric inhibitor of SHP2, with an IC50 of 0.583 nM.

  • CAS Number: 2172651-73-7
  • MF: C21H26Cl2N4O2
  • MW: 437.36
  • Catalog: Phosphatase
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

Smurf1-IN-1

Smurf1-IN-1 is an orally active and selective inhibitor of specific E3 ubiquitin protein ligase 1 (SMURF1) with an IC50 of 92 nM. Smurf1-IN-1 has significant efficacy in rats model of pulmonary hypertension[1].

  • CAS Number: 1824708-03-3
  • MF: C24H29ClN6O2
  • MW: 468.98
  • Catalog: E1/E2/E3 Enzyme
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

Eupalinolide B

Eupalinolide A, isolated from Eupatorium lindleyanum, induces the expression of HSP70 via the activation of HSF1 by inhibiting the interaction between HSF1 and HSP90[1].

  • CAS Number: 877822-40-7
  • MF: C24H30O9
  • MW: 462.490
  • Catalog: HSP
  • Density: 1.24±0.1 g/cm3 (20 ºC 760 Torr)
  • Boiling Point: 618.6±55.0 °C at 760 mmHg
  • Melting Point: N/A
  • Flash Point: 205.4±25.0 °C

WX 671

Upamostat is a serine protease inhibitor. Upamostat is the orally available prodrug of the WX-UK1, which is a urokinase plasminogen activator (uPA) inhibitor.

  • CAS Number: 590368-25-5
  • MF: C32H47N5O6S
  • MW: 629.81000
  • Catalog: Ser/Thr Protease
  • Density: 1.25
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

TAPI-2

TAPI-2 is a broad-spectrum inhibitor of matrix metalloprotease (MMP), tumour necrosis factorα-converting enzyme (TACE) and a disintegrin and metalloproteinase (ADAM), with an IC50 of 20±10 μM for MMP.

  • CAS Number: 187034-31-7
  • MF: C19H37N5O5
  • MW: 415.528
  • Catalog: MMP
  • Density: 1.1±0.1 g/cm3
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

Aschantin

Aschantin, a bisepoxylignan, can be isolated from Magnolia biondii. Aschantin has antiplasmodial, Ca2+-antagonistic, platelet activating factor-antagonistic, and chemopreventive activities. Aschantin is a mTOR kinase inhibitor. Aschantin is also an inhibitor of Cytochrome P450 and UGT enzyme[1][2].

  • CAS Number: 13060-15-6
  • MF: C22H24O7
  • MW: 400.42
  • Catalog: Cytochrome P450
  • Density: 1.3±0.1 g/cm3
  • Boiling Point: 525.8±50.0 °C at 760 mmHg
  • Melting Point: N/A
  • Flash Point: 214.7±30.0 °C

Aldose reductase-IN-6

Aldose reductase-IN-6 (Compound 3) is a competitive aldose reductase (AR) inhibitor with an IC50 of 3.164 μM and a Ki of 0.018 μM. Aldose reductase-IN-6 exhibits no cytotoxicity against healthy cells[1].

  • CAS Number: 2470019-41-9
  • MF: C20H16N4O2S
  • MW: 376.43
  • Catalog: Aldose Reductase
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

PF-06445974

PF-06445974, a promising positron emission tomography (PET) lead, has exquisite potency at PDE4B with an IC50 <1 nM. The IC50 values are 36, 4.7 and 17 nM for PDE4D, PDE4A and PDE4C, respectively. PF-06445974 has good selectivity over PDE4D, excellent brain permeability, and a high level of specific binding in the "cold tracer" study[1].

  • CAS Number: 2055776-17-3
  • MF: C20H15FN4O
  • MW: 346.36
  • Catalog: Phosphodiesterase (PDE)
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

Aldose reductase-IN-4

Aldose reductase-IN-4 (compund IIc) is an aldose reductase inhibitor with IC50s of 11.70 μM and 0.98 μM for aldehyde reductase 1 (ALR1) and ALR2, respectively[1].

  • CAS Number: 2446136-17-8
  • MF: C14H10FNO3S
  • MW: 291.30
  • Catalog: Aldose Reductase
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

Osocimab

Osocimab (BAY 1213790), an anti-FXIa antibody (Ki=2.4 nM; EC50=0.2 nM). FXI inhibition may reduce the risk of thrombosis. Osocimab inhibits thrombin generation, and prolongs activated partial thromboplastin time. Osocimab exhibits anticoagulant effects[1].

  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

Irucalantide

Irucalantide is kallikrein inhibitor[1].

  • CAS Number: 1631160-47-8
  • MF: C76H106N20O18S3
  • MW: 1683.97
  • Catalog: Ser/Thr Protease
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

Icapamespib

Icapamespib (PU-HZ151) is a potent HSP90 inhibitor with an EC50 of 5 nM. Icapamespib is able to cross blood-brain barrier[1].

  • CAS Number: 1000999-96-1
  • MF: C19H23IN6O2S
  • MW: 526.39
  • Catalog: HSP
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

Ledipasvir (acetone)

Ledipasvir acetone is the active pharmaceutical ingredient of Ledipasvir. Ledipasvir is an inhibitor of the hepatitis C virus NS5A, with EC50 values of 34 pM against GT1a and 4 pM against GT1b replicon.

  • CAS Number: 1441674-54-9
  • MF: C52H60F2N8O7
  • MW: 947.079
  • Catalog: HCV
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

Chrysin dimethylether

5,7-Dimethoxyflavone is one of the major components of Kaempferia parviflora, has anti-obesity, anti-inflammatory, and antineoplastic effects. 5,7-Dimethoxyflavone inhibits cytochrome P450 (CYP) 3As. 5,7-Dimethoxyflavone is also a potent Breast Cancer Resistance Protein (BCRP) inhibitor[1][2].

  • CAS Number: 21392-57-4
  • MF: C17H14O4
  • MW: 282.291
  • Catalog: Cytochrome P450
  • Density: 1.2±0.1 g/cm3
  • Boiling Point: 476.6±45.0 °C at 760 mmHg
  • Melting Point: 150-152ºC
  • Flash Point: 213.4±28.8 °C

(9,9-2H2)Hexadecanoic acid

Palmitic acid-d2-2 is the deuterium labeled Palmitic acid. Palmitic acid is a long-chain saturated fatty acid commonly found in both animals and plants. PA can induce the expression of glucose-regulated protein 78 (GRP78) and CCAAT/enhancer binding protein homologous protein (CHOP) in in mouse granulosa cells[1][2].

  • CAS Number: 272442-14-5
  • MF: C16H30D2O2
  • MW: 258.44
  • Catalog: HSP
  • Density: 0.9±0.1 g/cm3
  • Boiling Point: 340.6±5.0 °C at 760 mmHg
  • Melting Point: N/A
  • Flash Point: 154.1±12.5 °C