Epigeneics include any process that alters gene activity without changing the DNA sequence, and leads to modifications that can be transmitted to daughter cells. Many types of epigenetic processes have been identified—they include DNA methylation, alteration in the structure of histone proteins and gene regulation by small noncoding microRNAs.

Many different DNA and histone modifications have been identified to determine the epigenetic landscape. DNA methylation is mainly mediated by DNA-methyl transferase (DNMT), there are two known types of DNMT, namely DNMT1, which preserves preexisting pattern of methylation after cell replication, and DNMT3A/B, so-called “de novo” DNMT, which methylate previously unmethylated DNA. Histone modifications mainly include acetylation, methylation, phosphorylation, and ubiquitination. The acetylation of histones can be mediated by histone acetyltransferases (HATs) and histone deacetyltransferases (HDACs), while Histhone demethylation is performed by two classes of histone demethylases: lysine-specific demethylase (LSD) family proteins (LSD1 and LSD2) and JmjC domaincontaining histone demethylase (JHDM). Furthermore, enzymes involved in epigenetic modifications can also be governed by miRNAs. For example, miR-34a can directly inhibit the activities of SIRT1 to regulate cholesterol homeostasis.

The accumulated evidence indicates that many genes, diseases, and environmental substances are part of the epigenetics picture. At the FDA, scientists are investigating many drugs that function through epigenetic mechanisms. Drugs that inhibit DNA methylation or histone deacetylation have been studied for the reactivation of tumor suppressor genes and repression of cancer cell growth. Epigenetic inhibitors can also work alone or in combination with other therapeutic agents.

References:
[1] Bob Weinhold. Environ Health Perspect. 2006 Mar; 114(3): A160–A167.
[2] Xu W, et al. Genet Epigenet. 2016 Sep 25;8:43-51.
[3] Biswas S, et al. Pharmacol Ther. 2017. doi: 10.1016/j.pharmthera.2017.02.011.
[4] Perri F, et al. Crit Rev Oncol Hematol. 2017 Mar;111:166-172.


Anti-infection >
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Antibody-drug Conjugate >
ADC Cytotoxin ADC Linker Drug-Linker Conjugates for ADC PROTAC-linker Conjugate for PAC
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  • CAS Number: 433311-07-0
  • MF: C19H25N5S2
  • MW: 387.56500
  • Catalog: Epigenetic Reader Domain
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

Mitoxantrone 2HCl

Mitoxantrone dihydrochloride is a topoisomerase II inhibitor; also inhibits protein kinase C (PKC) activity with an IC50 of 8.5 μM.

  • CAS Number: 70476-82-3
  • MF: C22H30Cl2N4O6
  • MW: 517.403
  • Catalog: PKC
  • Density: N/A
  • Boiling Point: 805.7ºC at 760 mmHg
  • Melting Point: 203-205ºC
  • Flash Point: 441.1ºC

LSD1-IN-6

LSD1-IN-6 (Compound 4m) is a potent and reversible inhibitor of lysine-specific demethylase 1 (LSD1), with an IC50 of 123 nM. LSD1-IN-6 increases dimethylated Lys4 of histone H3, shows no effect on expression of LSD1[1].

  • CAS Number: 2035912-43-5
  • MF: C15H13BrN2O3
  • MW: 349.18
  • Catalog: Histone Demethylase
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

LSD1-IN-27

LSD1-IN-27 (Compound 5ac) is a LSD1 inhibitor (IC50: 13 nM). LSD1-IN-27 inhibits the stemness and migration of gastric cancer cells. LSD1-IN-27 also reduces the expression of PD-L1 in BGC-823 and MFC cells. LSD1-IN-27 can enhance T cell immune response in gastric cancer[1].

  • CAS Number: 2904571-94-2
  • MF: C24H25N3
  • MW: 355.48
  • Catalog: Histone Demethylase
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

SIRT5 inhibitor 6

SIRT5 Inhibitor 6 is a potent, substrate-competitive and selective SIRT5 inhibitor with an IC50 of 3.0 μM. SIRT5 Inhibitor6 has a therapeutic potential against septic AKI in vivo[1].

  • CAS Number: 2834736-82-0
  • MF: C21H28N6O4S
  • MW: 460.55
  • Catalog: Sirtuin
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

EML 425

EML425 is a potent and selective CREB binding protein (CBP)/p300 inhibitor with IC50s of 2.9 and 1.1 μM, respectively.

  • CAS Number: 1675821-32-5
  • MF: C27H24N2O4
  • MW: 440.491
  • Catalog: Epigenetic Reader Domain
  • Density: 1.3±0.1 g/cm3
  • Boiling Point: 622.8±65.0 °C at 760 mmHg
  • Melting Point: N/A
  • Flash Point: 330.5±34.3 °C

Veliparib (ABT-888)

Veliparib is a potent PARP inhibitor, inhibiting PARP1 and PARP2 with Kis of 5.2 and 2.9 nM, respectively.

  • CAS Number: 912444-00-9
  • MF: C13H16N4O
  • MW: 244.292
  • Catalog: Autophagy
  • Density: 1.3±0.1 g/cm3
  • Boiling Point: 579.0±40.0 °C at 760 mmHg
  • Melting Point: N/A
  • Flash Point: 304.0±27.3 °C

KDM5-IN-1

KDM5-IN-1 is a potent, selective and orally bioavailable KDM5 inhibitor with an IC50 of 15.1 nM.

  • CAS Number: 1628210-26-3
  • MF: C17H20N6O
  • MW: 324.380
  • Catalog: Histone Demethylase
  • Density: 1.3±0.1 g/cm3
  • Boiling Point: 527.0±60.0 °C at 760 mmHg
  • Melting Point: N/A
  • Flash Point: 272.5±32.9 °C

Fisetin

Fisetin is a natural flavonol found in many fruits and vegetables with various benefits, such as antioxidant, anticancer, neuroprotection effects.

  • CAS Number: 528-48-3
  • MF: C15H10O6
  • MW: 286.236
  • Catalog: TNF Receptor
  • Density: 1.7±0.1 g/cm3
  • Boiling Point: 599.4±50.0 °C at 760 mmHg
  • Melting Point: 330ºC
  • Flash Point: 233.0±23.6 °C

G007-LK

G007-LK is a potent and selective inhibitor of TNKS1 and TNKS2, with IC50s of 46 nM and 25 nM, respectively.

  • CAS Number: 1380672-07-0
  • MF: C25H16ClN7O3S
  • MW: 529.95800
  • Catalog: PARP
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

AluI Methyltransferase

AluI Methyltransferase (AluI) is a methyltransferase used as the interference enzymes to investigate the selectivity[1].

  • CAS Number: 92228-38-1
  • MF:
  • MW:
  • Catalog: DNA Methyltransferase
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

Crocin I

Gardenia yellow is an active member of crocin, increases mRNA expression of SIRT3, and acts as an orally active antidepressant agent[1].

  • CAS Number: 94238-00-3
  • MF: C44H64O24
  • MW: 976.965
  • Catalog: Sirtuin
  • Density: 1.5±0.1 g/cm3
  • Boiling Point: 1169.0±65.0 °C at 760 mmHg
  • Melting Point: N/A
  • Flash Point: 337.8±27.8 °C

Laccaic acid A

Laccaic acid A is a orally active and DNA-competitive inhibitor of DNA methyltransferase 1 (Dnmt1) (Ki=310 nM; IC50=650 nM). Laccaic acid A has stronger Dnmt1 inhibitory effect than SG-1027 (HY-13962). Laccaic acid A combined with Phenethyl isothiocyanate has a strong synergistic effect on colorectal cancer[1][2].

  • CAS Number: 15979-35-8
  • MF: C26H19NO12
  • MW: 537.42900
  • Catalog: DNA Methyltransferase
  • Density: 1.715g/cm3
  • Boiling Point: 995.3ºC at 760mmHg
  • Melting Point: N/A
  • Flash Point: 555.7ºC

Upadacitinib tartrate

Upadacitinib (ABT-494) tartrate tetrahydrate is a potent, orally active and selective Janus kinase 1 (JAK1) inhibitor (IC50=43 nM). Upadacitinib tartrate tetrahydrate displays approximately 74 fold selective for JAK1 over JAK2 (200 nM) in cellular assays dependent on specific, relevant cytokines. Upadacitinib tartrate tetrahydrate can be used for several autoimmune disorders research[1][2].

  • CAS Number: 1607431-21-9
  • MF: C21H33F3N6O11
  • MW: 602.516
  • Catalog: JAK
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

Divalproex sodium

Valproic acid (VPA) sodium (2:1) is an orally active HDAC inhibitor, with IC50 in the range of 0.5 and 2 mM, also inhibits HDAC1 (IC50, 400 μM), and induces proteasomal degradation of HDAC2. Valproic acid sodium (2:1) activates Notch1 signaling and inhibits proliferation in small cell lung cancer (SCLC) cells. Valproic acid sodium (2:1) is used in the treatment of epilepsy, bipolar disorder, metabolic disease, HIV infection and prevention of migraine headaches[1][2][3][4][5][6][7].

  • CAS Number: 76584-70-8
  • MF: C16H31NaO4
  • MW: 310.405
  • Catalog: HIV
  • Density: N/A
  • Boiling Point: 220ºC at 760 mmHg
  • Melting Point: 222ºC
  • Flash Point: 116.6ºC

Selisistat (EX 527)

Selisistat (EX-527) is a potent and selective SIRT1 inhibitor with IC50 of 98 nM.

  • CAS Number: 49843-98-3
  • MF: C13H13ClN2O
  • MW: 248.708
  • Catalog: Sirtuin
  • Density: 1.4±0.1 g/cm3
  • Boiling Point: 531.7±38.0 °C at 760 mmHg
  • Melting Point: 179.0 to 183.0 °C
  • Flash Point: 275.4±26.8 °C

PRMT5-IN-27

PRMT5-IN-27 (compound 481) is an inhibitor of PRMT5. PRMT5-IN-27 inhibits HCT116 cell proliferation with an IC 50 of 0.13 μM[1].

  • CAS Number: 2790567-82-5
  • MF: C22H19F3N4O3
  • MW: 444.41
  • Catalog: Histone Methyltransferase
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

Bisindolylmaleimide I (GF109203X)

Bisindolylmaleimide I (GF109203X) is a highly selective, cell-permeable, and reversible protein kinase C (PKC) inhibitor with a Ki of 14 nM.

  • CAS Number: 133052-90-1
  • MF: C25H24N4O2
  • MW: 412.484
  • Catalog: PKC
  • Density: 1.3±0.1 g/cm3
  • Boiling Point: 685.6±55.0 °C at 760 mmHg
  • Melting Point: 208-210ºC
  • Flash Point: 368.5±31.5 °C

JAK-2/3-IN-2

JAK-2/3-IN-2 (Compound 3h) is a JAK2 and JAK3 inhibitor with IC50s of 23.85 nM and 18.9 nM, respectively[1].

  • CAS Number: 2170398-48-6
  • MF: C19H19ClN2OS
  • MW: 358.88
  • Catalog: JAK
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

BET BD2-IN-1

BET BD2-IN-1 (compound 45) is a potent and selective inhibitor of BET BD2 (IC50=1.6 nM). BET BD2-IN-1 inhibits the differentiation of Th17 cells by decreasing the activation of STAT3 and NF-κB. BET BD2-IN-1 is used in psoriasis and inflammatory bowel disease (IBD) research[1].

  • CAS Number: 2677039-24-4
  • MF:
  • MW:
  • Catalog: Epigenetic Reader Domain
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

Rencofilstat

Rencofilstat (CRV431) is a non-immunosuppressive analogue of cyclosporine A and pan-cyclophilin inhibitor, potently inhibits cyclophilin isoforms A, B, D, and G with IC50 of 1-7 nM.Rencofilstat (CRV431) is more than 13 times more potent than the parent compound, cyclosporine A (CsA).Rencofilstat (CRV431) inhibits liver HBV DNA and HBsAg, reduces liver HBV DNA levels and moderately decreased serum HBsAg levels in HBV transgenic mouse model.Rencofilstat (CRV431) shows potential as a drug candidate for chronic liver diseases.

  • CAS Number: 1383420-08-3
  • MF: C67H122N12O13
  • MW: 1303.784
  • Catalog: Sirtuin
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

DC-BPi-03

DC-BPi-03 is a potent BPTF-BRD inhibitor with an IC50 of 698.3 nM and a Kd of 2.81 μM[1].

  • CAS Number: 2758411-46-8
  • MF: C14H14N4O2S
  • MW: 302.35
  • Catalog: Epigenetic Reader Domain
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

Itacnosertib

Itacnosertib (TP-0184) is both inhibitor to JAK2, ACVR1 (ALK2) and ALK5 as described in WO2014151871[1].

  • Density: 1.3±0.1 g/cm3
  • Boiling Point: 675.4±65.0 °C at 760 mmHg
  • Melting Point: N/A
  • Flash Point: 362.2±34.3 °C

LIN28 inhibitor LI71

LIN28 inhibitor LI71 is a potent and cell-permeable LIN28 inhibitor, which abolishes LIN28-mediated oligouridylation with an IC50 of 7 uM. LIN28 inhibitor LI71 directly binds the cold shock domain (CSD) to suppress LIN28’s activity against let-7 in leukemia cells and embryonic stem cells[1].

  • CAS Number: 1357248-83-9
  • MF: C21H21NO3
  • MW: 335.40
  • Catalog: MicroRNA
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

O-304

O-304 is a small molecule AMPK activator.

  • CAS Number: 1261289-04-6
  • MF: C16H11Cl2N3O2S
  • MW: 380.25
  • Catalog: AMPK
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

Galegine hydrochloride

Galegine hydrochloride, a guanidine derivative, contributes to weight loss in mice. Guanidine hydrochloride is the compound derived from G. officinalis, which gave rise to the biguanides, metformin and phenformin. Galegine hydrochloride activates AMPK in 3T3-L1 adipocytes and L6 myotubes, as well as in the H4IIE rat hepatoma and HEK293 human kidney cell lines. Galegine hydrochloride has antibacterial activity, with minimum inhibitory concentration of 4 mg/L against Staphylococcus aureus strains[1][2].

  • CAS Number: 2368870-39-5
  • MF: C6H14ClN3
  • MW: 163.65
  • Catalog: Bacterial
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

SGC-CBP30

SGC-CBP30 is a potent CREBBP/EP300 bromodomain inhibitor with IC50 of 21-69 and 38 nM for CREBBP and EP300 bromodomains, respectively.IC50 Value: 21-69 nM(for CREBBP); 38 nM(for EP300)Target: Othersin vivo: SGC-CBP30 is a highly potent and selective p300/CBP bromodomain inhibitor (IC50 ~0.021-0.069 uM for CBP and ~0.038 uM for p300). It has 40-fold selectivity for CBP over BRD4. It accelerated FRAP recovery at 1 uM. in vivo: N/A

  • CAS Number: 1613695-14-9
  • MF: C28H33ClN4O3
  • MW: 509.040
  • Catalog: Epigenetic Reader Domain
  • Density: 1.3±0.1 g/cm3
  • Boiling Point: 678.0±55.0 °C at 760 mmHg
  • Melting Point: N/A
  • Flash Point: 363.8±31.5 °C

Daphnetin

Daphnetin (7,8-dihydroxycoumarin), one coumarin derivative isolated from plants of the Genus Daphne, is a protein kinase inhibitor, with IC50s of 7.67 μM, 9.33 μM and 25.01 μM for EGFR, PKA and PKC in vitro, respectively[1][2]. Daphnetin (7,8-dihydroxycoumarin) is a secondary metabolite of plants used in folk medicine to counter inflammatory and allergic diseases, also has been clinically used in the treatment of coagulation disorders, rheumatoid arthritis with anti-malarian and anti-pyretic properties[3].

  • CAS Number: 486-35-1
  • MF: C9H6O4
  • MW: 178.14
  • Catalog: PKC
  • Density: 1.6±0.1 g/cm3
  • Boiling Point: 430.4±45.0 °C at 760 mmHg
  • Melting Point: 265-268°C (dec.)
  • Flash Point: 184.5±22.2 °C

Tyk2-IN-4(BMS986165)

Tyk2-IN-4 is a selective, potent, allosteric inhibitor of tyrosine kinase 2 (Tyk2).

  • CAS Number: 1609392-27-9
  • MF: C20H19D3N8O3
  • MW: 425.46
  • Catalog: JAK
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

Rovadicitinib

Rovadicitinib is a Janus kinase (JAK) inhibitor with an IC50 value <20 nM. Rovadicitinib also exhibits anti-inflammatory activity[1][2].

  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A