Metabolic pathways are enzyme-mediated biochemical reactions that lead to biosynthesis (anabolism) or breakdown (catabolism) of natural product small molecules within a cell or tissue. In each pathway, enzymes catalyze the conversion of substrates into structurally similar products. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation. Metabolism maintains the living state of the cells and the organism.

Proteases are used throughout an organism for various metabolic processes. Proteases control a great variety of physiological processes that are critical for life, including the immune response, cell cycle, cell death, wound healing, food digestion, and protein and organelle recycling. On the basis of the type of the key amino acid in the active site of the protease and the mechanism of peptide bond cleavage, proteases can be classified into six groups: cysteine, serine, threonine, glutamic acid, aspartate proteases, as well as matrix metalloproteases. Proteases can not only activate proteins such as cytokines, or inactivate them such as numerous repair proteins during apoptosis, but also expose cryptic sites, such as occurs with β-secretase during amyloid precursor protein processing, shed various transmembrane proteins such as occurs with metalloproteases and cysteine proteases, or convert receptor agonists into antagonists and vice versa such as chemokine conversions carried out by metalloproteases, dipeptidyl peptidase IV and some cathepsins. In addition to the catalytic domains, a great number of proteases contain numerous additional domains or modules that substantially increase the complexity of their functions.

Imbalances in metabolic activities have been found to be critical in a number of pathologies, such as cardiovascular diseases, inflammation, cancer, and neurodegenerative diseases.

References:
[1] Turk B, et al. EMBO J. 2012 Apr 4;31(7):1630-43.
[2] Eatemadi A, et al. Biomed Pharmacother. 2017 Feb;86:221-231.


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15-PGDH 5 alpha Reductase 5-Lipoxygenase Acetyl-CoA Carboxylase Acyltransferase Adenosine Deaminase Adenosine Kinase Aldehyde Dehydrogenase (ALDH) Aldose Reductase Aminopeptidase Angiotensin-converting Enzyme (ACE) ATGL ATP Citrate Lyase Carbonic Anhydrase Carboxypeptidase Cathepsin CETP COMT Cytochrome P450 Dipeptidyl Peptidase Dopamine β-hydroxylase E1/E2/E3 Enzyme Elastase Enolase FAAH FABP Factor Xa Farnesyl Transferase Fatty Acid Synthase (FAS) FXR Glucokinase GSNOR Gutathione S-transferase HCV Protease Hexokinase HIF/HIF Prolyl-Hydroxylase HIV Integrase HIV Protease HMG-CoA Reductase (HMGCR) HSP Indoleamine 2,3-Dioxygenase (IDO) Isocitrate Dehydrogenase (IDH) Lactate Dehydrogenase LXR MAGL Mineralocorticoid Receptor Mitochondrial Metabolism MMP Nampt NEDD8-activating Enzyme Neprilysin PAI-1 PDHK PGC-1α Phosphatase Phosphodiesterase (PDE) Phospholipase Procollagen C Proteinase Proteasome Pyruvate Kinase RAR/RXR Renin ROR Ser/Thr Protease SGK Stearoyl-CoA Desaturase (SCD) Thrombin Tryptophan Hydroxylase Tyrosinase Xanthine Oxidase
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Glucosamine-2-13C hydrochloride

Glucosamine-2-13C hydrochloride is the 13C labeled Glucosamine hydrochloride. Glucosamine hydrochloride (D-Glucosamine hydrochloride) is an amino sugar and a prominent precursor in the biochemical synthesis of glycosylated proteins and lipids, is used as

  • CAS Number: 1220349-37-0
  • MF: C513CH14ClNO5
  • MW: 216.62
  • Catalog: Autophagy
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

Cerivastatin

Cerivastatin is a synthetic lipid-lowering agent and a highly potent, well-tolerated and orally active HMG-CoA reductase inhibitor, with a Ki of 1.3 nM/L. Cerivastatin reduces low-density lipoprotein cholesterol levels. Cerivastatin also inhibits proliferation and invasiveness of MDA-MB-231 cells, mainly by RhoA inhibition, and has anti-cancer effect[1][2][3].

  • CAS Number: 145599-86-6
  • MF: C26H34FNO5
  • MW: 441.53500
  • Catalog: Ferroptosis
  • Density: 1.181 g/cm3
  • Boiling Point: 646.3ºC at 760 mmHg
  • Melting Point: N/A
  • Flash Point: 344.7ºC

Benzylacetone

Benzylacetone is an aromatic compound from agarwood[1]. Benzylacetone exhibits potent and reversible antityrosinase (mushroom) activity, with IC50s of 2.8 mM and 0.6 mM for monophenolase and diphenolase, respectively[2]. Benzylacetone has appetite-enhancing and locomotor-reducing effects[3].

  • CAS Number: 2550-26-7
  • MF: C10H12O
  • MW: 148.202
  • Catalog: Tyrosinase
  • Density: 1.0±0.1 g/cm3
  • Boiling Point: 233.5±0.0 °C at 760 mmHg
  • Melting Point: -13ºC
  • Flash Point: 98.3±0.0 °C

Ac-WLA-AMC

Ac-WLA-AMC is a specific 20S constitutive proteasome β5 fluorogenic substrate[1].

  • CAS Number: 1104011-59-7
  • MF: C32H37N5O6
  • MW: 587.666
  • Catalog: Proteasome
  • Density: 1.3±0.1 g/cm3
  • Boiling Point: 992.3±65.0 °C at 760 mmHg
  • Melting Point: N/A
  • Flash Point: 553.9±34.3 °C

Activator 42

KG-548 is an ARNT/TACC3 disruptor and a HIF-1α inhibitor. KG-548 directly interferes with ARNT/TACC3 complex formation by competing with TACC3 for binding to the ARNT PAS-B domain. ARNT is the aryl hydrocarbon receptor nuclear translocator, also known as HIF-β[1][2].

  • CAS Number: 175205-09-1
  • MF: C9H4F6N4
  • MW: 282.14500
  • Catalog: HIF/HIF Prolyl-Hydroxylase
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: 177-180°C
  • Flash Point: N/A

TMC435

Simeprevir (TMC435; TMC435350) sodium is an oral, potent and highly specific hepatitis C virus (HCV) NS3/4A protease inhibitor with a Ki of 0.36 nM. Simeprevir sodium inhibits HCV replication with an EC50 of 7.8 nM. Simeprevir sodium also potently suppresses SARS-CoV-2 replication and synergizes with Remdesivir. Simeprevir sodium inhibits the main protease (Mpro) and the RNA-dependent RNA polymerase (RdRp) of SARS-CoV-2, and also modulates host immune responses[1][4].

  • CAS Number: 1241946-89-3
  • MF: C38H46N5NaO7S2
  • MW: 771.92100
  • Catalog: HCV
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

5-[[4-[2-(3-methoxyphenyl)-2-oxoethoxy]phenyl]methyl]-1,3-thiazolidine-2,4-dione

MSDC-0602, a PPARγ-sparing thiazolidinedione (TZD), interacts with the mitochondrial pyruvate carrier (MPC) and inhibits its activity and are effective for treatment of type 2 diabetes with reducing risk of PPARγ-mediated side effects[1][2].

  • CAS Number: 1133819-87-0
  • MF: C19H17NO5S
  • MW: 371.41
  • Catalog: Mitochondrial Metabolism
  • Density: 1.3±0.1 g/cm3
  • Boiling Point: 608.1±40.0 °C at 760 mmHg
  • Melting Point: N/A
  • Flash Point: 321.6±27.3 °C

ZK824859

ZK824859 is an oral available and selective urokinase plasminogen activator (uPA) inhibitor with IC50s of 79 nM, 1580 nM and 1330 nM for human uPA, tPA, and plasmin, respectively[1].

  • CAS Number: 2271122-53-1
  • MF: C23H22F2N2O4
  • MW: 428.43
  • Catalog: PAI-1
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

Tyrosinase-IN-6

Compound 4B proved to be the most effective tyrosinase inhibitor (ic50= 3.80 μ M) It also showed good antioxidant activity.

  • CAS Number: 2569221-17-4
  • MF: C24H31N3O2
  • MW: 393.52
  • Catalog: Tyrosinase
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

hA2A/hCA XII modulator 1

hA2A/hCA XII modulator 1 (compound 14), a triazolopirazine, is a potent hA2A adenosine receptor (hA2AAR) antagonist with Kis of 6.4 nM, 4.819 μM, >30 μM for hA2AAR, hA1AR, hA3AR, respectively. hA2A/hCA XII modulator 1 is a potent human carbonic anhydrase XII (hCA XII) inhibitor with Kis of 6.2 nM, 46 nM, 466 nM, 8.351 μM for hCA XII, hCA II, hCA IX and hCA I, respectively. hA2A/hCA XII modulator 1 has the potential for cancer research[1].

  • CAS Number: 2548963-55-7
  • MF: C24H19N7O4S
  • MW: 501.52
  • Catalog: Adenosine Receptor
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

SHP099 hydrochloride

SHP099 hydrochloride is a potent, selective and orally available SHP2 inhibitor with an IC50 of 70 nM.

  • CAS Number: 1801747-11-4
  • MF: C16H20Cl3N5
  • MW: 388.723
  • Catalog: Phosphatase
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

Cilomilast-d9

Cilomilast-d9 (SB-207499-d9) is the deuterium labeled Cilomilast. Cilomilast (SB-207499) is a potent, selective and orally active inhibitor of Phosphodiesterase 4 (PDE4), with IC50s of ~100 and 120 nM for LPDE4 and HPDE4, respectively. Cilomilast shows selectivity for PDE4 over PDE1, PDE2, PDE3 and PDE5 (IC50=74, 65, >100, and 83 µM, respectively). Cilomilast has anti-inflammatory and immunomodulatory effects and can be used for thr research of asthma and chronic obstructive pulmonary disease (COPD)[1][2][3][4].

  • CAS Number: 1794779-92-2
  • MF: C20H16D9NO4
  • MW: 352.47
  • Catalog: Phosphodiesterase (PDE)
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

PD150606

PD 150606 is a selective, cell-permeable non-peptide calpain inhibitor (Ki values for ν and m-calpains are 0.21 and 0.37 μM respectively).target:calpain[1]In vitro: PD150606 also against tetrafluoroethyl-l-cysteine-, bromohydroquinone-, oxidant (t-butylhydroperoxide)- and calcium ionophore (ionomycin)-induced cell death. PD150606 inhibits calpains by binding to the calcium-binding domain of the enzyme. [2] high specificity for calpains relative to other proteases, uncompetitive inhibition with respect to substrate.[3]

  • CAS Number: 179528-45-1
  • MF: C9H7IO2S
  • MW: 306.120
  • Catalog: Proteasome
  • Density: 1.9±0.1 g/cm3
  • Boiling Point: 410.4±45.0 °C at 760 mmHg
  • Melting Point: N/A
  • Flash Point: 202.0±28.7 °C

Zaragozic acid E

Zaragozic acid E, a fungal metabolite, is a potent inhibitor of squalence synthetase with IC50s of 2.3-28 nM[1].

  • CAS Number: 151990-70-4
  • MF: C40H50O12
  • MW: 722.82
  • Catalog: Farnesyl Transferase
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

α-Lipoic Acid

α-Lipoic Acid is an antioxidant, which is an essential cofactor of mitochondrial enzyme complexes. α-Lipoic Acid inhibits NF-κB-dependent HIV-1 LTR activation.

  • CAS Number: 1077-28-7
  • MF: C8H14O2S2
  • MW: 206.326
  • Catalog: HIV
  • Density: 1.2±0.1 g/cm3
  • Boiling Point: 362.5±11.0 °C at 760 mmHg
  • Melting Point: 60-62ºC
  • Flash Point: 173.0±19.3 °C

(1β,3β)-Spirosta-5,25(27)-dien-1,3-diol

Neoruscogenin, a member of the steroidal sapogenin family, is a bioavailable, potent, and high-affinity agonist of the nuclear receptor RORα (NR1F1)[1].

  • CAS Number: 17676-33-4
  • MF: C27H40O4
  • MW: 428.604
  • Catalog: ROR
  • Density: 1.2±0.1 g/cm3
  • Boiling Point: 566.6±50.0 °C at 760 mmHg
  • Melting Point: 196-198℃
  • Flash Point: 296.4±30.1 °C

Carprofen

Carprofen is a nonsteroid anti-inflammatory agent, acts as a multi-target FAAH/COX inhibitor, with IC50s of 3.9 μM, 22.3 μM and 78.6 μM for COX-2, COX-1 and FAAH, respectively.

  • CAS Number: 53716-49-7
  • MF: C15H12ClNO2
  • MW: 273.714
  • Catalog: Autophagy
  • Density: 1.4±0.1 g/cm3
  • Boiling Point: 509.1±35.0 °C at 760 mmHg
  • Melting Point: 186-188ºC
  • Flash Point: 261.7±25.9 °C

3-Phenyltoxoflavin

3-Phenyltoxoflavin, a derivative of Toxoflavin, is an Hsp90 inhibitor, with a Kd of 585 nM for the interaction of Hsp90-TPR2A. 3-Phenyltoxoflavin has anti-cancer activity[1][2].

  • CAS Number: 32502-63-9
  • MF: C13H11N5O2
  • MW: 269.25900
  • Catalog: HSP
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

MLS000545091

MLS000545091 is a potent and selective lipoxygenase-2 (LOX-2) inhibitor with an IC50 value of 2.6 μM for h15-LOX-2[1].

  • CAS Number: 322666-76-2
  • MF: C14H15ClN2O
  • MW: 262.73
  • Catalog: 5-Lipoxygenase
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

Ombitasvir

Ombitasvir is a potent inhibitor of the hepatitis C virus protein NS5A, with EC50s of 0.82 to 19.3 pM against HCV genotypes 1 to 5, and 366 pM against genotype 6a.

  • CAS Number: 1258226-87-7
  • MF: C50H67N7O8
  • MW: 894.109
  • Catalog: HCV
  • Density: 1.2±0.1 g/cm3
  • Boiling Point: 1065.6±65.0 °C at 760 mmHg
  • Melting Point: N/A
  • Flash Point: 598.2±34.3 °C

RS-25344 hydrochloride

RS-25344 hydrochloride is a selective cAMP-phosphodiesterase 4 (PDE 4; PDE IV) inhibitor with an IC50 of 0.28 nM in human lymphocytes. RS-25344 hydrochloride has only weak inhibitory effects on PDE I, II, III (IC50 of >100 μM, 160 μM, 330 μM, respectively). RS-25344 hydrochloride has anti-inflammatory, memory- and cognition enhancing, and antineoplastic effects[1][2].

  • CAS Number: 152815-28-6
  • MF: C19H14ClN5O4
  • MW: 411.799
  • Catalog: Phosphodiesterase (PDE)
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

16 alpha-Hydroxytrametenolic acid

16α-Hydroxytrametenolic acid, a natural triterpene, is a potential retinoid X receptor (RXR) selective agonist[1].

  • CAS Number: 176390-68-4
  • MF: C30H48O4
  • MW: 472.71
  • Catalog: RAR/RXR
  • Density: 1.11±0.1 g/cm3(Predicted)
  • Boiling Point: 598.3±50.0 °C(Predicted)
  • Melting Point: N/A
  • Flash Point: N/A

Isotanshinone IIA

Isotanshinone IIA, an abietane-type diterpene metabolite, could non-competitively inhibit Protein Tyrosine Phosphatase 1B (PTP1B) activity with an IC50 0f 11.4 μM.

  • CAS Number: 20958-15-0
  • MF: C19H18O3
  • MW: 294.34400
  • Catalog: Phosphatase
  • Density: N/A
  • Boiling Point: 471.1±45.0 °C(Predicted)
  • Melting Point: N/A
  • Flash Point: N/A

Esaxerenone

Esaxerenone is a novel, highly potent and selective non-steroidal mineralocorticoid receptor antagonist.

  • CAS Number: 1632006-28-0
  • MF: C22H21F3N2O4S
  • MW: 466.473
  • Catalog: Mineralocorticoid Receptor
  • Density: 1.4±0.1 g/cm3
  • Boiling Point: 581.3±50.0 °C at 760 mmHg
  • Melting Point: N/A
  • Flash Point: 305.4±30.1 °C

Mevastatin

Mevastatin (Compactin; ML236B) inhibits HMGCR (HMG-CoA reductase) (Ki for acid form is 1 nM) which in turn inhibits isoprenoid biosynthesis and therefore blocks protein isoprenylation and reduces plasma cholesterol levels in humans. IC50 value: 1 nM (Ki)Target: HMGCRMevastatin induces apoptosis, arrests cancer cells in G1 phase and downregulates cdk 2, 4, and 6, cyclin D1 and E1, p21 and p27. Mevastatin suppresses TNF-induced NF-κB activation (IC50 = ~17 uM), which potentiates apoptosis in human myeloid leukemia cells and thus, may be useful in treating cancer.

  • CAS Number: 73573-88-3
  • MF: C23H34O5
  • MW: 390.513
  • Catalog: Autophagy
  • Density: 1.1±0.1 g/cm3
  • Boiling Point: 555.0±50.0 °C at 760 mmHg
  • Melting Point: 151-153 °C
  • Flash Point: 186.5±23.6 °C

(E/Z)-BCI

(E/Z)-BCI (NSC 150117) is a dual-specificity phosphatase 6 (DUSP6) inhibitor with anti-inflammatory activities. (E/Z)-BCI attenuates LPS-induced inflammatory mediators and ROS production in macrophage cells via activating the Nrf2 signaling axis and inhibiting the NF-κB pathway[1].

  • CAS Number: 15982-84-0
  • MF: C22H23NO
  • MW: 317.42
  • Catalog: Phosphatase
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

YH-306

YH-306 is a candidate drug in preventing growth and metastasis of colorectal cancer by modulating FAK signalling pathway.

  • CAS Number: 1373764-75-0
  • MF: C19H18N2O2
  • MW: 306.36
  • Catalog: Apoptosis
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

C75

C75 is a synthetic fatty-acid synthase (FASN) inhibitor; inhibits prostate cancer cells PC3 with an IC50 of 35 μM.

  • CAS Number: 218137-86-1
  • MF: C14H22O4
  • MW: 254.322
  • Catalog: Fatty Acid Synthase (FAS)
  • Density: 1.1±0.1 g/cm3
  • Boiling Point: 432.1±45.0 °C at 760 mmHg
  • Melting Point: N/A
  • Flash Point: 159.2±22.2 °C

RMC-4550

RMC-4550 is a potent, selective and allosteric inhibitor of SHP2, with an IC50 of 0.583 nM.

  • CAS Number: 2172651-73-7
  • MF: C21H26Cl2N4O2
  • MW: 437.36
  • Catalog: Phosphatase
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

Smurf1-IN-1

Smurf1-IN-1 is an orally active and selective inhibitor of specific E3 ubiquitin protein ligase 1 (SMURF1) with an IC50 of 92 nM. Smurf1-IN-1 has significant efficacy in rats model of pulmonary hypertension[1].

  • CAS Number: 1824708-03-3
  • MF: C24H29ClN6O2
  • MW: 468.98
  • Catalog: E1/E2/E3 Enzyme
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A