Epigeneics include any process that alters gene activity without changing the DNA sequence, and leads to modifications that can be transmitted to daughter cells. Many types of epigenetic processes have been identified—they include DNA methylation, alteration in the structure of histone proteins and gene regulation by small noncoding microRNAs.

Many different DNA and histone modifications have been identified to determine the epigenetic landscape. DNA methylation is mainly mediated by DNA-methyl transferase (DNMT), there are two known types of DNMT, namely DNMT1, which preserves preexisting pattern of methylation after cell replication, and DNMT3A/B, so-called “de novo” DNMT, which methylate previously unmethylated DNA. Histone modifications mainly include acetylation, methylation, phosphorylation, and ubiquitination. The acetylation of histones can be mediated by histone acetyltransferases (HATs) and histone deacetyltransferases (HDACs), while Histhone demethylation is performed by two classes of histone demethylases: lysine-specific demethylase (LSD) family proteins (LSD1 and LSD2) and JmjC domaincontaining histone demethylase (JHDM). Furthermore, enzymes involved in epigenetic modifications can also be governed by miRNAs. For example, miR-34a can directly inhibit the activities of SIRT1 to regulate cholesterol homeostasis.

The accumulated evidence indicates that many genes, diseases, and environmental substances are part of the epigenetics picture. At the FDA, scientists are investigating many drugs that function through epigenetic mechanisms. Drugs that inhibit DNA methylation or histone deacetylation have been studied for the reactivation of tumor suppressor genes and repression of cancer cell growth. Epigenetic inhibitors can also work alone or in combination with other therapeutic agents.

References:
[1] Bob Weinhold. Environ Health Perspect. 2006 Mar; 114(3): A160–A167.
[2] Xu W, et al. Genet Epigenet. 2016 Sep 25;8:43-51.
[3] Biswas S, et al. Pharmacol Ther. 2017. doi: 10.1016/j.pharmthera.2017.02.011.
[4] Perri F, et al. Crit Rev Oncol Hematol. 2017 Mar;111:166-172.


Anti-infection >
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HJB97

HJB97 is a high-affinity BET inhibitor with Kis of 0.9±0.2 nM (BRD2 BD1), 0.27±0.09 nM (BRD2 BD2), 0.18±0.01 nM (BRD3 BD1), 0.21±0.03 nM (BRD3 BD2), 0.5±0.2 nM (BRD4 BD1), 1.0±0.1 nM (BRD4 BD2), respectively. HJB97 is a PROTAC BET degrader. Antitumor activity[1].

  • CAS Number: 2093391-24-1
  • MF: C26H28N8O3
  • MW: 500.55
  • Catalog: Epigenetic Reader Domain
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

N-(1,1-Dimethylethyl)-3-[[5-methyl-2-[[3-(4-morpholinylmethy-l)phenyl]amino]-4-pyrimidinyl]amino]benz

JAK-IN-32 (XC) is a bi-aryl meta-pyrimidine inhibitor of JAK kinase[1].

  • CAS Number: 936091-56-4
  • MF: C26H34N6O3S
  • MW: 510.65
  • Catalog: JAK
  • Density: 1.3±0.1 g/cm3
  • Boiling Point: 686.9±65.0 °C at 760 mmHg
  • Melting Point: N/A
  • Flash Point: 369.3±34.3 °C

ZEN-2759

ZEN-2759 is BRD4(BD1) inhibitor.

  • CAS Number: 1616400-50-0
  • MF: C17H16N2O2
  • MW: 280.327
  • Catalog: Epigenetic Reader Domain
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

GSK-J4

GSK-J4 is a potent H3K27me3 histone lysine demethylase (KDM) inhibitor, with IC50s of 8.6 μM and 6.6 μM against KDM6B and KDM6A, respectively.

  • CAS Number: 1373423-53-0
  • MF: C24H27N5O2
  • MW: 417.504
  • Catalog: Histone Demethylase
  • Density: 1.2±0.1 g/cm3
  • Boiling Point: 581.2±50.0 °C at 760 mmHg
  • Melting Point: N/A
  • Flash Point: 305.3±30.1 °C

LP 99

LP99 is the first potent and selective BRD7/9 bromodomain inhibitor with Kd of 99 nM for BRD9; inhibits IL‐6 secretion from THP‐1 cells in a dose‐dependent manner; decreases BRET for both BRD7 and BRD9 in both the H3.3 and H4 systems in a dose‐dependent manner, with cellular IC50 values in the low micromolar range for both histones.

  • CAS Number: 1808951-93-0
  • MF: C26H30ClN3O4S
  • MW: 516.052
  • Catalog: Epigenetic Reader Domain
  • Density: 1.4±0.1 g/cm3
  • Boiling Point: 726.6±70.0 °C at 760 mmHg
  • Melting Point: N/A
  • Flash Point: 393.2±35.7 °C

C8-Ceramide

C8-Ceramide (N-Octanoyl-D-erythro-sphingosine) is a cell-permeable analog of naturally occurring ceramides. C8-Ceramide has anti-proliferation properties and acts as a potent chemotherapeutic agent. C8-Ceramide stimulates dendritic cells to promote T cell responses upon virus infections. C8-Ceramide induces slight activation of protein kinase (PKC) in vitro[1][2][3][4].

  • CAS Number: 74713-59-0
  • MF: C26H51NO3
  • MW: 425.688
  • Catalog: Apoptosis
  • Density: 0.9±0.1 g/cm3
  • Boiling Point: 595.5±50.0 °C at 760 mmHg
  • Melting Point: 68-70°C
  • Flash Point: 313.9±30.1 °C

CAY10591

SIRT1 activator 3 is a potent activator of Sirt1 and suppresses TNF-α in a dose-dependent manner. SIRT1 activator 3 has the potential for anti-obesity or anti-diabetic researches[1].

  • CAS Number: 839699-72-8
  • MF: C20H25N5O2
  • MW: 367.445
  • Catalog: Sirtuin
  • Density: 1.4±0.1 g/cm3
  • Boiling Point: 651.4±55.0 °C at 760 mmHg
  • Melting Point: N/A
  • Flash Point: 347.7±31.5 °C

CFT8634

CFT8634 is a degrader targeting BRD9 extracted from patent WO2021178920A1 compound 173. CFT8634 can be used for the research of synovial sarcoma and SMARCB1-deleted solid tumors[1].

  • CAS Number: 2704617-95-6
  • MF: C37H45F3N6O5
  • MW: 710.79
  • Catalog: Epigenetic Reader Domain
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

PARP1-IN-6

PARP1-IN-6 is a dual tubulin/PARP-1 inhibitor with IC50 values of 0.94 and 0.48 μM, respectively.

  • CAS Number: 1654735-36-0
  • MF: C16H11FN2O
  • MW: 266.27
  • Catalog: PARP
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

CMP-5 hydrochloride

CMP-5 (PRMT5-IN-5)is a first-in-class, small-molecule PRMT5-specific inhibitor that blocks EBV-driven B-lymphocyte transformation and survival, without effect on normal B cells; displays no activity against other type I (PRMT1 and PRMT4) and type II (PRMT7) enzymes; inhibition of PRMT5 leads to lost recruitment of a PRMT5/p65/HDAC3-repressive complex on the miR96 promoter, restored miR96 expression, and PRMT5 downregulation.

  • CAS Number: 1030021-40-9
  • MF: C21H22ClN3
  • MW: 351.872
  • Catalog: Histone Methyltransferase
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

Tinengotinib

Tinengotinib is the modulator of one or more protein kinases such as Aurora kinase and VEGFR kinase. Tinengotinib has the potential for the research of these kinase abnormalities diseases mediated, especially cancer-related diseases (extracted from patent WO2018108079A1)[1].

  • CAS Number: 2230490-29-4
  • MF: C20H19ClN6O
  • MW: 394.86
  • Catalog: Aurora Kinase
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

TYK2 JH2-IN-1-d3

TYK2?JH2-IN-1-d3 is the a deuterated, orally active and selective TYK2 inhibitor (compound 4h), targeting to JH2 domain (IC50=0.1 nM)[1].

  • CAS Number: 2376999-19-6
  • MF: C24H21D3FN9O3
  • MW: 508.52
  • Catalog: JAK
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

HDAC6-IN-5

HDAC6-IN-5 (compound 11b) is a potent and BBB-penetrated HDAC6 inhibitor, with an IC50 of 0.025 μM. HDAC6-IN-5 exhibits strong inhibitory activity against Aβ1-42 self-aggregation and AChE, with IC50 values of 3.0 and 0.72 μM. HDAC6-IN-5 can enhance neurite outgrowth without significant neurotoxicity[1].

  • CAS Number: 2413603-15-1
  • MF: C20H14BrN3O2
  • MW: 408.25
  • Catalog: HDAC
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

VTP50469

VTP50469 is a potent, highly selective and orally active Menin-MLL interaction inhibitor with a Ki of 104 pM. VTP50469 has potently anti-leukemia activity[1][2].

  • CAS Number: 2169916-18-9
  • MF: C32H47FN6O4S
  • MW: 630.82
  • Catalog: Apoptosis
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

Prostratin

Prostratin, a natural terpenoid compound, is a PKC activator, with a Ki of 12.5 nM and shows inhibitory effect on HIV-1.

  • CAS Number: 60857-08-1
  • MF: C22H30O6
  • MW: 390.470
  • Catalog: HIV
  • Density: 1.3±0.1 g/cm3
  • Boiling Point: 550.5±50.0 °C at 760 mmHg
  • Melting Point: 216-219℃
  • Flash Point: 188.7±23.6 °C

DCH36_06

DCH36_06 is a potent and selective p300/CBP inhibitor with IC50s of 0.6 μM and 3.2 μM for p300 and CBP, respectively. DCH36_06 mediated p300/CBP inhibition leading to hypoacetylation on H3K18 in leukemic cells. Anti-tumor activity[1].

  • CAS Number: 593273-05-3
  • MF: C18H13ClN2O3S
  • MW: 372.83
  • Catalog: Apoptosis
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

thieno(2,3-c)isoquinolin-5-one

TIQ-A is a potent TNKS (poly-ART, PARP) inhibitor, with an IC50 of 24 nM for TNKS2. TIQ-A is a potential anti-ischemic agent[1].

  • CAS Number: 420849-22-5
  • MF: C11H7NOS
  • MW: 201.244
  • Catalog: PARP
  • Density: 1.4±0.1 g/cm3
  • Boiling Point: 282.2±9.0 °C at 760 mmHg
  • Melting Point: N/A
  • Flash Point: 124.5±18.7 °C

SDR-04

SDR-04 is a BET inhibitor and exhibits strong BRD4-BD1 affinity and inhibition activity. SDR-04 potently suppresses MV4;11 cancer cell line proliferation[1].

  • CAS Number: 879593-54-1
  • MF: C19H16N4O2
  • MW: 332.36
  • Catalog: Epigenetic Reader Domain
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

Nicotinamide Riboside

Nicotinamide riboside is a crystal form of Nicotinamide riboside (NR) chloride. Nicotinamide riboside increases NAD[+] levels and activates SIRT1 and SIRT3, culminating in enhanced oxidative metabolism and protection against high fat diet-induced metabolic abnormalities. Nicotinamide riboside is used in dietary supplements[1].

  • CAS Number: 1341-23-7
  • MF: C11H15N2O5
  • MW: 255.247
  • Catalog: Sirtuin
  • Density: 1.201g/cm3
  • Boiling Point: 353.7ºC at 760mmHg
  • Melting Point: N/A
  • Flash Point: 181.9ºC

KDM5-C70

KDM5-C70 is an ethyl ester derivative of KDM5-C49 and a potent, cell-permeable and pan-KDM5 histone demethylase inhibitor. KDM5-C70 has an antiproliferative effect in myeloma cells, leading to genome-wide elevation of H3K4me3 levels[1][2].

  • CAS Number: 1596348-32-1
  • MF: C17H28N4O3
  • MW: 336.429
  • Catalog: Histone Demethylase
  • Density: 1.1±0.1 g/cm3
  • Boiling Point: 466.6±45.0 °C at 760 mmHg
  • Melting Point: N/A
  • Flash Point: 236.0±28.7 °C

Menin-MLL inhibitor 21

Menin-MLL inhibitor 21(example 9) is a specific irreversible inhibitor of Menin-MLL interactions and can be used in the study of autoimmune diseases, alloimmune diseases, cancer and other diseases dependent on menin-MLL[1].

  • CAS Number: 2448172-22-1
  • MF: C31H34N8O3
  • MW: 566.65
  • Catalog: Epigenetic Reader Domain
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

AS 8351

AS8351 is a KDM5B inhibitor, which can induce and sustain active chromatin marks to facilitate the induction of cardiomyocyte-like cells.

  • CAS Number: 796-42-9
  • MF: C17H13N3O2
  • MW: 291.30400
  • Catalog: Histone Demethylase
  • Density: 1.364g/cm3
  • Boiling Point: 503.5ºC at 760 mmHg
  • Melting Point: 266 °C
  • Flash Point: 258.3ºC

AMG-900

AMG 900 is a potent and highly selective pan-Aurora kinases inhibitor with IC50 of 5 nM, 4 nM and 1 nM for Aurora A, B and C, respectively.

  • CAS Number: 945595-80-2
  • MF: C28H21N7OS
  • MW: 503.578
  • Catalog: Aurora Kinase
  • Density: 1.4±0.1 g/cm3
  • Boiling Point: 778.7±70.0 °C at 760 mmHg
  • Melting Point: N/A
  • Flash Point: 424.7±35.7 °C

GSK6853

GSK6853 is a potent and selective inhibitor of the BRPF1 bromodomain. shows excellent BRPF1 potency (pKd 9.5) andgreater than 1600-fold selectivity over all other bromodomainstested.target: BRPF1.[1]In vivo: The ip route of administration would be suitable for dosing GSK6853 in potential PK/PD models. [1]

  • CAS Number: 1910124-24-1
  • MF: C22H27N5O3
  • MW: 409.482
  • Catalog: Epigenetic Reader Domain
  • Density: 1.2±0.1 g/cm3
  • Boiling Point: 545.9±50.0 °C at 760 mmHg
  • Melting Point: N/A
  • Flash Point: 284.0±30.1 °C

SS-208

SS-208 is a selective HDAC6 inhibitor, with an IC50 of 12 nM. SS-208 possesses anti-tumor activity in melanoma[1].

  • CAS Number: 2245942-72-5
  • MF: C13H11Cl2N3O4
  • MW: 344.15
  • Catalog: HDAC
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

MPI-5a

MPI_5a is a potent and selective HDAC6 inhibitor (IC50=36 nM). MPI_5a weakly inhibits other HDAC isoforms. MPI_5a inhibits acyl-tubulin accumulation in cells with an IC50 value of 210 nM[1].

  • CAS Number: 1259296-46-2
  • MF: C16H17N3O3
  • MW: 299.324
  • Catalog: HDAC
  • Density: 1.3±0.1 g/cm3
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

A2AAR/HDAC-IN-2

A2AAR/HDAC-IN-2 is a potent A2AAR/HDAC dual inhibitor, with good binding affinity for A2AAR (Ki=10.3 nM) and good inhibitory activity against HDAC1 (IC50=18.5 nM). A2AAR/HDAC-IN-2 can be used in study of antitumor[1].

  • CAS Number: 2767560-94-9
  • MF: C23H26N6O4
  • MW: 450.49
  • Catalog: HDAC
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

(S)-Ro 32-0432 free base

(S)-Ro 32-0432 free base is a potent, selective, ATP-competitive and orally active PKC inhibitor. The IC50 values of (S)-Ro 32-0432 free base for PKCα, PKCβI, PKCβII, PKCγ and PKCε are 9.3 nM, 28 nM, 30 nM, 36.5 nM and 108.3 nM, respectively. (S)-Ro 32-0432 free base is also a selective G protein-coupled receptor kinase 5 (GRK5) inhibitor. (S)-Ro 32-0432 free base prevents T-cell activation and has the potential for chronic inflammatory and autoimmune diseases research[1][2].

  • CAS Number: 151342-35-7
  • MF: C28H28N4O2
  • MW: 452.55
  • Catalog: PKC
  • Density: N/A
  • Boiling Point: 711.9ºC at 760 mmHg
  • Melting Point: N/A
  • Flash Point: 384.3ºC

Bisindolylmaleimide I HCl

Bisindolylmaleimide I (GF109203X) hydrochloride is a cell-permeable and reversible PKC inhibitor (IC50 of 20 nM, 17 nM, 16 nM, and 20 nM for PKCα, PKCβI, PKCβII, and PKCγ. Bisindolylmaleimide I hydrochloride is also a GSK-3 inhibitor[1][2][3].

  • CAS Number: 176504-36-2
  • MF: C25H25ClN4O2
  • MW: 448.94500
  • Catalog: PKC
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

EZH2-IN-7

EZH2-IN-7 is a potent inhibitor of EZH2. EZH2 overexpression or mutations in the SET region (Y641F, Y641N, A687V, A677G point mutations) all lead to abnormal elevation of H3K27me3 and promote the growth and development of many types of tumors, such as breast cancer, prostate cancer, leukemia, etc. EZH2-IN-7 has the potential for the research of cancer diseases (extracted from patent WO2021129629A1, compound 259)[1].

  • CAS Number: 2659225-28-0
  • MF: C31H37D2N5O3S
  • MW: 563.75
  • Catalog: Histone Methyltransferase
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A