2'-Deoxy-5-methylcytidine

Modify Date: 2025-08-20 19:41:47

2'-Deoxy-5-methylcytidine structure	Common Name	2'-Deoxy-5-methylcytidine
	CAS Number	838-07-3	Molecular Weight	241.244
	Density	1.6±0.1 g/cm3	Boiling Point	492.8±55.0 °C at 760 mmHg
	Molecular Formula	C₁₀H₁₅N₃O₄	Melting Point	217-219 °C(lit.)
	MSDS	N/A	Flash Point	251.9±31.5 °C

Use of 2'-Deoxy-5-methylcytidine

5-Methyl-2'-deoxycytidine in single-stranded DNA can act in cis to signal de novo DNA methylation[1][2].

Name	5-methyl-2'-deoxycytidine
Synonym	More Synonyms

Description	5-Methyl-2'-deoxycytidine in single-stranded DNA can act in cis to signal de novo DNA methylation[1][2].
Related Catalog	Research Areas >> Others Signaling Pathways >> Epigenetics >> DNA Methyltransferase
Target	Human Endogenous Metabolite
References	[1]. Christman JK, et al. 5-Methyl-2'-deoxycytidine in single-stranded DNA can act in cis to signal de novo DNA methylation. Proc Natl Acad Sci U S A. 1995 Aug 1;92(16):7347-51. [2]. Testillano PS, et al. The 5-methyl-deoxy-cytidine (5mdC) localization to reveal in situ the dynamics of DNA methylation chromatin pattern in a variety of plant organ and tissue cells during development. Physiol Plant. 2013 Sep;149(1):104-13.

Density	1.6±0.1 g/cm3
Boiling Point	492.8±55.0 °C at 760 mmHg
Melting Point	217-219 °C(lit.)
Molecular Formula	C₁₀H₁₅N₃O₄
Molecular Weight	241.244
Flash Point	251.9±31.5 °C
Exact Mass	241.106262
PSA	110.60000
LogP	-1.28
Vapour Pressure	0.0±2.8 mmHg at 25°C
Index of Refraction	1.694
Storage condition	−20°C

2'-Deoxy-5-methylcytidine MSDS(Chinese)

CHEMICAL IDENTIFICATION

RTECS NUMBER :: HA3860000

CHEMICAL NAME :: Cytidine, 2'-deoxy-5-methyl-

CAS REGISTRY NUMBER :: 838-07-3

BEILSTEIN REFERENCE NO. :: 0024189

LAST UPDATED :: 199612

DATA ITEMS CITED :: 1

MOLECULAR FORMULA :: C10-H15-N3-O4

MOLECULAR WEIGHT :: 241.28

HEALTH HAZARD DATA

ACUTE TOXICITY DATA

MUTATION DATA

TYPE OF TEST :: DNA inhibition

TEST SYSTEM :: Rodent - hamster Ovary

DOSE/DURATION :: 10 umol/L

REFERENCE :: BBACAQ Biochimica et Biophysica Acta. (Elsevier Science Pub. B.V., POB 211, 1000 AE Amsterdam, Netherlands) V.1- 1947- Volume(issue)/page/year: 697,286,1982

Hazard Codes	Xi
Risk Phrases	R36/37/38
Safety Phrases	26-36
WGK Germany	3
RTECS	HA3860000
HS Code	2934999090

Precursor 10
CAS#:115652-25-0 5-methyl-1-(3,5... CAS#:80991-41-9 1-(3,5-DIMETHYL... CAS#:80991-42-0 3',5'-O-bis(ter... CAS#:50-89-5 Thymidine
CAS#:93841-35-1 4-thiothymidine... CAS#:3226-65-1 H-Met(O)-OH CAS#:951-77-9 2'-Deoxycytidin... CAS#:67-68-5 Dimethyl sulfoxide
CAS#:35898-30-7 3',5'-DI-O-BENZ... CAS#:20188-74-3 3',5'-di-O-acet...
DownStream 9
CAS#:5116-24-5 5-Hydroxymethyl... CAS#:50-89-5 Thymidine CAS#:554-01-8 5-METHYLCYTOSINE CAS#:1123-95-1 5-HYDROXYMETHYL...
CAS#:7226-77-9 5-Hydroxymethyl... CAS#:951-77-9 2'-Deoxycytidin... CAS#:951-78-0 2'-deoxyuridine CAS#:104579-03-5 5'-DMT-N4-Bz-5-Me-dC
CAS#:4494-26-2 5-Formyl-dU

HS Code	2934999090
Summary	2934999090. other heterocyclic compounds. VAT:17.0%. Tax rebate rate:13.0%. . MFN tariff:6.5%. General tariff:20.0%

4-Amino-1-(2-deoxy-β-D-glycero-pentofuranosyl)-5-methylpyrimidin-2(1H)-one

4-Amino-1-(2-deoxy-β-D-erythro-pentofuranosyl)-5-methylpyrimidin-2(1H)-on

4-amino-1-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]-5-methylpyrimidin-2-one

4-Amino-1-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)tetrahydro-2-furanyl]-5-methyl-2(1H)-pyrimidinone

2'-Deoxy-5-methylcytidine

EINECS 212-655-1

Cytidine, 2'-deoxy-5-methyl-

MFCD00006549

2(1H)-pyrimidinone, 4-amino-1-(2-deoxy-β-D-glycero-pentofuranosyl)-5-methyl-

5-Methyl-2'-deoxy-cytidine

5-Methyl-2'-deoxycytidine

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China
Product Name: 5-methyl-2'-deoxycytidine
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