IPA-3

Modify Date: 2025-08-28 10:01:42

IPA-3 Structure
IPA-3 structure
Common Name IPA-3
CAS Number 42521-82-4 Molecular Weight 350.454
Density 1.5±0.1 g/cm3 Boiling Point 543.7±35.0 °C at 760 mmHg
Molecular Formula C20H14O2S2 Melting Point 172℃
MSDS Chinese USA Flash Point 263.4±24.7 °C
Symbol GHS05 GHS09
GHS05, GHS09
Signal Word Danger

 Use of IPA-3


IPA-3 is a selective non-ATP competitive PAK1 inhibitor with IC50 of 2.5 μM, and shows no inhibition to group II PAKs (PAKs 4-6).

 Names

Name 1-[(2-hydroxynaphthalen-1-yl)disulfanyl]naphthalen-2-ol
Synonym More Synonyms

 IPA-3 Biological Activity

Description IPA-3 is a selective non-ATP competitive PAK1 inhibitor with IC50 of 2.5 μM, and shows no inhibition to group II PAKs (PAKs 4-6).
Related Catalog
Target

PAK1:2.5 μM (IC50)

In Vitro IPA-3 inhibits Pak1 activation in part by binding covalently to the regulatory domain of Pak1. IPA-3 binds Pak1 covalently in a time- and temperature-dependent manner. IPA-3 prevents binding of the Pak1 activator Cdc42. IPA-3 binds directly to the Pak1 autoregulatory domain. IPA-3 reversibly inhibits PMA-induced membrane ruffling in cells[1]. IPA-3 (2 µM, 5 µM or 20 µM) reduces cell spreading in human primary Schwann and schwannoma cells. IPA-3 treatment significantly reduces the number of adherent Schwann and schwannoma cells in a dose-dependent manner[2]. IPA-3 is a non ATP-competitive, allosteric inhibitor of p21-activated kinase 1 (Pak1). PIR3.5 is the control compound of IPA-3. IPA-3 prevents Cdc42-stimulated Pak1 autophosphorylation on Thr423. IPA-3 also prevents sphingosine-dependent Pak1 autophosphorylation. IPA-3 does not target exposed cysteine residues on Pak1. The disulfide bond of IPA-3 is critical for inhibition of Pak1 and in vitro reduction by the reducing agent dithiothreitol (DTT) abolishes Pak1 inhibition by IPA-3. IPA-3 inhibits activation of Pak1 by diverse activators, but does not inhibit preactivated Pak1. IPA-3 inhibits PDGF-stimulated Pak activation in mouse embryonic fibroblasts[3].
Kinase Assay Pak1 (150 nM final) is pre-incubated with MBP (8.3 μM), indicated proteins, and IPA-3 or DMSO in Kinase buffer for 20 minutes at 4°C. Cdc42-GTPγS (3.2 μM) is then added and the reaction is pre-equilibrated 10 minutes at 30°C. Kinase reactions are started by the addition of ATP (to 30 μM) containing [32P]ATP and are incubated 10 min and analyzed by SDS-PAGE and autoradiography.
Cell Assay Human primary schwannoma cells are grown on 96 well plates for 2 days. Cells are left untreated or treated with 5 µM IPA-3, 20 µM IPA-3 or 20 µM PIR-3.5 for 24 hours. The MTS-solution is left on the cells for 3 hours, before the absorbance at 490 nm is measured. The experiments are conducted three times and mean and standard error of the mean is calculated with Excel.
References

[1]. Viaud J, et al. An allosteric kinase inhibitor binds the p21-activated kinase autoregulatory domain covalently. Mol Cancer Ther. 2009 Sep;8(9):2559-65.

[2]. Flaiz C, et al. PAK kinase regulates Rac GTPase and is a potential target in human schwannomas. Exp Neurol. 2009 Jul;218(1):137-44.

[3]. Deacon SW, et al. An isoform-selective, small-molecule inhibitor targets the autoregulatory mechanism of p21-activated kinase. Chem Biol. 2008 Apr;15(4):322-31.

 Chemical & Physical Properties

Density 1.5±0.1 g/cm3
Boiling Point 543.7±35.0 °C at 760 mmHg
Melting Point 172℃
Molecular Formula C20H14O2S2
Molecular Weight 350.454
Flash Point 263.4±24.7 °C
Exact Mass 350.043518
PSA 91.06000
LogP 4.96
Appearance of Characters off-white to yellow
Vapour Pressure 0.0±1.5 mmHg at 25°C
Index of Refraction 1.836
InChIKey RFAXLXKIAKIUDT-UHFFFAOYSA-N
SMILES Oc1ccc2ccccc2c1SSc1c(O)ccc2ccccc12
Storage condition Store at +4°C
Water Solubility DMSO: >20mg/mL | Soluble in DMSO or ethanol. Insoluble in water.

 Safety Information

Symbol GHS05 GHS09
GHS05, GHS09
Signal Word Danger
Hazard Statements H318-H410
Precautionary Statements P273-P280-P305 + P351 + P338-P501
Personal Protective Equipment dust mask type N95 (US);Eyeshields;Gloves
Hazard Codes Xi,N
Risk Phrases 41-50/53
Safety Phrases 26-39-60-61
RIDADR UN 3077 9 / PGIII
HS Code 2930909090

 Synthetic Route

 Customs

HS Code 2930909090
Summary 2930909090. other organo-sulphur compounds. VAT:17.0%. Tax rebate rate:13.0%. . MFN tariff:6.5%. General tariff:30.0%

 Articles19

More Articles
Essential role of endocytosis for interleukin-4-receptor-mediated JAK/STAT signalling.

J. Cell Sci. 128 , 3781-95, (2015)

Many important signalling cascades operate through specialized signalling endosomes, but a corresponding mechanism has as yet not been described for hematopoietic cytokine receptors. Based on live-cel...

PAK1 regulates RUFY3-mediated gastric cancer cell migration and invasion.

Cell Death Dis. 6 , e1682, (2015)

Actin protrusion at the cell periphery is central to the formation of invadopodia during tumor cell migration and invasion. Although RUFY3 (RUN and FYVE domain containing 3)/SINGAR1 (single axon-relat...

AP-2-associated protein kinase 1 and cyclin G-associated kinase regulate hepatitis C virus entry and are potential drug targets.

J. Virol. 89(8) , 4387-404, (2015)

Hepatitis C virus (HCV) enters its target cell via clathrin-mediated endocytosis. AP-2-associated protein kinase 1 (AAK1) and cyclin G-associated kinase (GAK) are host kinases that regulate clathrin a...

 Synonyms

1,1'-Disulfanediyldi(2-naphthol)
1,1'-Dithiodi-2-naphthol
UNII-3XFG6MQ9G2
F0400-0044
2-Naphthalenol, 1,1'-dithiobis-
IPA-3
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