THZ531

Modify Date: 2025-09-10 23:09:19

THZ531 Structure
THZ531 structure
Common Name THZ531
CAS Number 1702809-17-3 Molecular Weight 558.07
Density N/A Boiling Point N/A
Molecular Formula C30H32ClN7O2 Melting Point N/A
MSDS N/A Flash Point N/A

 Use of THZ531


THZ531 is a covalent inhibitor of both CDK12 and CDK13 with IC50s of 158 nM and 69 nM, respectively.

 Names

Name THZ-531
Synonym More Synonyms

 THZ531 Biological Activity

Description THZ531 is a covalent inhibitor of both CDK12 and CDK13 with IC50s of 158 nM and 69 nM, respectively.
Related Catalog
Target

CDK12:158 nM (IC50)

CDK13:69 nM (IC50)

In Vitro The results from Kinase assays demonstrate that THZ531 potently inhibits CDK12 and CDK13 with IC50s of 158 nM and 69 nM, respectively; whereas inhibition of CDK7 and CDK9 is more than 50-fold weaker with IC50s of 8.5 and 10.5 µM, respectively. THZ531 treatment leads to a dramatic and irreversible decrease in Jurkat cell proliferation with an IC50 of 50 nM. FACS cell cycle analysis following treatment with escalating doses of THZ531 displays a dose and time-dependent increase in the number of cells exhibiting sub-G1 content. At 50 nM THZ531, no increase in the percentage of apoptotic cells is observed over DMSO control for the time course of the experiment. Higher doses of THZ531 leads to pronounced Annexin V signal with 30 to 40% annexin V-positively stained cells by 72 hrs. A dramatic reduction in elongating Pol II following THZ531 treatment is also observed[1].
Kinase Assay Cells are treated with THZ531 or DMSO for 6 hrs. Following treatment cells are washed 2-fold with cold PBS and then lysed in the following lysis buffer: 50 mM Hepes pH 7.4, 150 mM NaCl, 1% Nonidet P40 substitute, 5 mM EDTA, 1 mM DTT, and protease/phosphatase cocktails. Following clearance, lysates are treated with bio-THZ1 or bio-TH531 for pulldown overnight at 4°C. Lysates are further incubated at room temperature for 3 hrs to increase the efficiency of covalent bond formation. Lysates are then incubated with streptavidin agarose for pulldown for an additional 2 to 3 hrs at 4°C[1].
Cell Assay Jurkat cells are plated in 96-well plates at 20,000 cells/well in fresh media and treated with THZ531 or DMSO at the indicated concentrations for 72 hours. HAP1 cells are seeded in 96-well plates at 12,000 cells/well in fresh media and 24 hours later are treated with THZ531 at the indicated concentrations for 72 hours. Anti-proliferative effect of THZ531 is assessed. To assess the effect of inhibitor washout on anti-proliferation of Jurkat cells, cells are treated with THZ531 or DMSO for 6 hrs. Inhibitor-containing medium is then removed and incubated with or without THZ531 for 66 hrs. Anti-proliferative effect of THZ531 is assessed. All proliferation assays are performed in biological triplicate. IC50s are determined using non-linear regression curve fit[1].
References

[1]. Zhang T, et al. Covalent targeting of remote cysteine residues to develop CDK12 and CDK13 inhibitors. Nat Chem Biol. 2016 Oct;12(10):876-84.

 Chemical & Physical Properties

Molecular Formula C30H32ClN7O2
Molecular Weight 558.07
InChIKey RUBYHLPRZRMTJO-MOVYNIQHSA-N
SMILES CN(C)CC=CC(=O)Nc1ccc(C(=O)N2CCCC(Nc3ncc(Cl)c(-c4c[nH]c5ccccc45)n3)C2)cc1
Storage condition 2-8℃

 THZ531Bioassay

View more

Name: Inhibition of CDK12 (unknown origin) at 1 uM in presence of ATP by kinase-glo plus lu...
Source: ChEMBL
Target: Cyclin-dependent kinase 12
External Id: CHEMBL5626381
Name: Inhibition of CDK7 (unknown origin)
Source: ChEMBL
Target: Cyclin-dependent kinase 7
External Id: CHEMBL4611854
Name: Inhibition of PARP1 (unknown origin) at 1 uM incubated for 1 hr by ELISA analysis rel...
Source: ChEMBL
Target: Poly [ADP-ribose] polymerase 1
External Id: CHEMBL5626382
Name: Inhibition of CDK7/cyclin H/MNAT1 (unknown origin) pre incubated up to 60 mins follow...
Source: ChEMBL
Target: CDK-activating kinase assembly factor MAT1
External Id: CHEMBL4611857
Name: Inhibition of CDK12 (unknown origin) in presence of ATP by kinase-glo plus luminescen...
Source: ChEMBL
Target: Cyclin-dependent kinase 12
External Id: CHEMBL5626383
Name: Inhibition of CDK2/Cyclin A (unknown origin)
Source: ChEMBL
Target: Cyclin-A2
External Id: CHEMBL4828798
Name: Inhibition of recombinant human CDK12/Cyclin K using RNA Pol II-CTD as substrate prei...
Source: ChEMBL
Target: Cyclin-dependent kinase 12
External Id: CHEMBL5538676
Name: Cytotoxicity counterscreen for inhibitors of SARS-CoV-2 cell entry
Source: NCGC
Target: N/A
External Id: TRND-SARS-CoV-2-cytotox-48hr
Name: Protac activity at human CDK12/CycK in human MDA-MB-231 cells assessed as downregulat...
Source: ChEMBL
Target: Cyclin-dependent kinase 12
External Id: CHEMBL5043525
Name: Primary qHTS to identify inhibitors of SARS-CoV-2 cell entry
Source: NCGC
External Id: TRND-SARS-CoV-2-PP
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 Synonyms

THZ531
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