The effect of pyridyl substituents on the thermodynamics of porphyrin binding to G-quadruplex DNA

GB Rowland, K Barnett, JI DuPont, G Akurathi…

Index: Rowland, Gerald B.; Barnett, Kerry; Dupont, Jesse I.; Akurathi, Gopalakrishna; Le, Vu H.; Lewis, Edwin A. Bioorganic and Medicinal Chemistry, 2013 , vol. 21, # 23 p. 7515 - 7522

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Citation Number: 12

Abstract

Abstract Most of the G-quadruplex interactive molecules reported to date contain extended aromatic flat ring systems and are believed to bind principally by π–π stacking on the end G- tetrads of the quadruplex structure. One such molecule, TMPyP4,(5, 10, 15, 20-tetra (N- methyl-4-pyridyl) porphyrin), exhibits high affinity and some selectivity for G-quadruplex DNA over duplex DNA. Although not a realistic drug candidate, TMPyP4 is used in many ...