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485-63-2 靶点实验数据

HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:ChEMBL 靶标:Peroxisome proliferator-activated receptor gamma
External ID: CHEMBL1059360
Protocol: N/A
Comment: Journal: J. Med. Chem.
Year: 2009
Volume: 52
Issue: 21
First Page: 6835
Last Page: 6850
DOI: 10.1021/jm900964r

Target ChEMBL ID: CHEMBL235
ChEMBL Target Name: Peroxisome proliferator-activated receptor gamma
ChEMBL Target Type: SINGLE PROTEIN - Target is a single protein chain
Relationship Type: D - Direct protein target assigned
Confidence: Direct single protein target assigned
Standard TypeStandard RelationStandard ValueActivity Comment
FC=1.9
FC=2
FC=1.2
FC=1.2
FC=1
FC=1.8
FC=1.3
FCNot Active
FC=1.3
FC=2.5
FC=1.25
FC=2.7
FC=1.8
FC=2.4
FC=1.3
FC=1.6
FC=2
FC=4.6
FC=2.3
FC=1.9
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:ChEMBL 靶标:Mus musculus
External ID: CHEMBL5128740
Protocol: N/A
Comment: Journal: Eur J Med Chem
Year: 2022
Volume: 237
First Page: 114405
Last Page: 114405
DOI: 10.1016/j.ejmech.2022.114405

Target ChEMBL ID: CHEMBL375
ChEMBL Target Name: Mus musculus
ChEMBL Target Type: ORGANISM - Target is a complete organism
Relationship Type: N - Non-molecular target assigned
Confidence: Target assigned is non-molecular
Standard TypeStandard RelationStandard ValueStandard Units
Activity=63.5%
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:ChEMBL 靶标:Macrophage migration inhibitory factor
External ID: CHEMBL1021636
Protocol: N/A
Comment: Compounds with activity <= 10uM or explicitly reported as active by ChEMBL are flagged as active in this PubChem assay presentation.

Journal: J. Med. Chem.
Year: 2009
Volume: 52
Issue: 2
First Page: 416
Last Page: 424
DOI: 10.1021/jm801100v

Target ChEMBL ID: CHEMBL2085
ChEMBL Target Name: Macrophage migration inhibitory factor
ChEMBL Target Type: SINGLE PROTEIN - Target is a single protein chain
Relationship Type: D - Direct protein target assigned
Confidence: Direct single protein target assigned
PubChem Standard ValueStandard TypeStandard RelationStandard ValueStandard UnitsActivity CommentData Validity Comment
4.3Ki=4300nM
0.47Ki=470nM
2.1Ki=2100nM
ActivityNot Active
1.6Ki=1600nM
530IC50=530000nMOutside typical range
980IC50=980000nMOutside typical range
300IC50=300000nMOutside typical range
430IC50=430000nMOutside typical range
4.2IC50=4200nM
4.5IC50=4500nM
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:24642 靶标:ubiquitin specific peptidase 8
External ID: USP8 FAST DUB HTS Primary
Protocol: Deubiquitinases were purified from E. Coli. Ub-Rho substrate was purchased from Boston BioChem (Cat #: U-555). Assay buffer consisted of 50 mM Tris pH 8, 50 mM NaCl, 0.002% Tween20, 5 mM DTT in MilliQ water. Stop buffer consisted of assay buffer + 0.2% trifluoroacetic acid.

Protocol for Inhibitors of USP8: Primary Screen
1.#Compound, 20 nL of screening compounds (final concentration of 20 uM) to columns 1-46 of a Greiner 1536 well Black, flat bottom, polystyrene microplate (Griener 782076) (columns 45-46: DMSO control)
2.#Reagent, 2.5 uL of assay buffer to columns 47-48 on all plates (No enzyme control)
3.#Reagent, 2.5 uL of USP8 in assay buffer (final concentration of 1 nM) to columns 1-46
4.#Reagent, 2.5 uL of Ub-Rho in assay buffer (final concentration of 50 nM) to all wells
5.#Time, Incubate at room temperature for 30 minutes
6.#Detection, Fluorescence, PheraStar, FITC Module
Comment: Normalization of raw data to positive and negative control wells were applied to the data using Helios, a high-throughput screening data analysis program developed at Novartis.(Gubler et al., 2018)

Compounds demonstrating greater than or equal to 30% inhibition of USP8 (USP8_EFFICACY >/= 30) were called as active, compounds demonstrating activity below this threshold were called as inactive.
USP8-Efficacy
46.639
-12.507
31.998
5.438
-6.685
15.21
-15.155
14.048
-4.808
14.043
13.854
55.661
-5.386
27.936
7.845
12.88
0.228
3.333
-3.366
0.283
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:ChEMBL 靶标:N9
External ID: CHEMBL4001903
Protocol: N/A
Comment: Compounds with activity <= 10uM or explicitly reported as active by ChEMBL are flagged as active in this PubChem assay presentation.

Journal: Bioorg Med Chem Lett
Year: 2017
Volume: 27
Issue: 4
First Page: 973
Last Page: 978
DOI: 10.1016/j.bmcl.2016.12.075

Target ChEMBL ID: CHEMBL613516
ChEMBL Target Name: N9
ChEMBL Target Type: CELL-LINE - Target is a specific cell-line
Relationship Type: N - Non-molecular target assigned
Confidence: Target assigned is non-molecular
PubChem Standard ValueStandard TypeStandard RelationStandard ValueStandard UnitsActivity Comment
100IC50>100000nM
68.02IC50=68020nM
Inhibition%Dose-dependent effect
2.68IC50=2680nM
Inhibition%Dose-dependent effect
100IC50>100000nM
17.87IC50=17870nM
Inhibition%Dose-dependent effect
100IC50>100000nM
45.54IC50=45540nM
Inhibition%Dose-dependent effect
100IC50>100000nM
100IC50>100000nM
17.43IC50=17430nM
Inhibition%Dose-dependent effect
75.2IC50=75200nM
Inhibition%Dose-dependent effect
100IC50>100000nM
11.21IC50=11210nM
Inhibition%Dose-dependent effect
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:24642 靶标:ubiquitin specific peptidase 17 like family member 5
External ID: USP17 FAST DUB HTS Primary
Protocol: Deubiquitinases were purified from E. Coli. Ub-Rho substrate was purchased from Boston BioChem (Cat #: U-555). Assay buffer consisted of 50 mM Tris pH 8, 50 mM NaCl, 0.002% Tween20, 5 mM DTT in MilliQ water. Stop buffer consisted of assay buffer + 0.2% trifluoroacetic acid.

Protocol for Inhibitors of USP17: Primary Screen
1. Compound, 50 nL of screening compounds (final concentration of 50 uM) to columns 1-46 of a Greiner 1536 well Black, flat bottom, polystyrene microplate (Griener 782076) (columns 45-46: DMSO control)
2. Reagent, 2.5 uL of assay buffer to columns 47-48 on all plates (No enzyme control)
3. Reagent, 2.5 uL of USP17 in assay buffer (final concentration of 1 nM) to columns 1-46
4. Reagent, 2.5 uL of Ub-Rho in assay buffer (final concentration of 40 nM) to all wells
5. Time, Incubate at room temperature for 3 hours
6. Reagent, 2.5 uL of stop buffer to all wells
7. Centrifuge plates (5s, 350 rpm)
8. Detection, Fluorescence, PheraStar, FITC Module
Comment: Normalization of raw data to positive and negative control wells were applied to the data using Helios, a high-throughput screening data analysis program developed at Novartis.(Gubler et al., 2018)

Compounds demonstrating greater than or equal to 30% inhibition of USP17 (USP17_EFFICACY >/= 30) were called as active, compounds demonstrating activity below this threshold were called as inactive.
USP17-Efficacy
-11.703
-22.774
-17.896
1.991
13.524
0.0347
-9.782
55.109
-7.352
14.263
28.858
-17.021
12.515
47.032
7.524
3.661
-9.31
-4.13
17.206
2.868
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:Shanghai Institute of Organic Chemistry 靶标:N/A
External ID: PDBbind-IC50 for protein-ligand complexes
Protocol:
Comment:
PDBbind Data LinkAffinity_QuilifierIC50PubMedProtein TargetProtein NameMMDBPDB
http://www.pdbbind.org.cn/quickpdb.asp?quickpdb=1a5v=80095601881A5V_Ahiv-1 integrase477691A5V
http://www.pdbbind.org.cn/quickpdb.asp?quickpdb=1a86=10196553331A86_Amatrix metalloproteinase 81039321A86
http://www.pdbbind.org.cn/quickpdb.asp?quickpdb=1aq1=0.00793347431AQ1_Acell division protein kinase 2553151AQ1
http://www.pdbbind.org.cn/quickpdb.asp?quickpdb=1b9v=224105472891B9V_Aneuraminidase121091B9V
http://www.pdbbind.org.cn/quickpdb.asp?quickpdb=1bji=0.00295265561BJI_Aneuraminidase555721BJI
http://www.pdbbind.org.cn/quickpdb.asp?quickpdb=1bl6=0.1697536911BL6_Ap38 map kinase107411BL6
http://www.pdbbind.org.cn/quickpdb.asp?quickpdb=1bl7=0.01997536911BL7_Ap38 map kinase107421BL7
http://www.pdbbind.org.cn/quickpdb.asp?quickpdb=1bmb=0.7100907801BMB_Agrowth factor receptor bound protein 2119431BMB
http://www.pdbbind.org.cn/quickpdb.asp?quickpdb=1bqm=0.04598131201BQM_A,1BQM_Bhiv-1 reverse transcriptase89181BQM
http://www.pdbbind.org.cn/quickpdb.asp?quickpdb=1bqo=0.018497334821BQO_Bstromelysin-1107611BQO
http://www.pdbbind.org.cn/quickpdb.asp?quickpdb=1bug=4398468791BUG_Acatechol oxidase112221BUG
http://www.pdbbind.org.cn/quickpdb.asp?quickpdb=1bzs=0.01103543991BZS_Aneutrophil collagenase (mmp8)133541BZS
http://www.pdbbind.org.cn/quickpdb.asp?quickpdb=1c29=0.472105042361C29_Atryptophan synthase124151C29
http://www.pdbbind.org.cn/quickpdb.asp?quickpdb=1c3i=1.6108778501C3I_Bstromelysin-1138151C3I
http://www.pdbbind.org.cn/quickpdb.asp?quickpdb=1c8k=1109245121C8K_Aglycogen phosphorylase133911C8K
http://www.pdbbind.org.cn/quickpdb.asp?quickpdb=1c8v=0.472105042361C8V_Atryptophan synthase (alpha chain)124281C8V
http://www.pdbbind.org.cn/quickpdb.asp?quickpdb=1cw2=0.715105042361CW2_Atryptophan synthase (alpha chain)117011CW2
http://www.pdbbind.org.cn/quickpdb.asp?quickpdb=1cx9=0.178105042361CX9_Atryptophan synthase (alpha chain)117021CX9
http://www.pdbbind.org.cn/quickpdb.asp?quickpdb=1d7x=0.003106392841D7X_A,1D7X_Bstromelysin-1 precursor147881D7X
http://www.pdbbind.org.cn/quickpdb.asp?quickpdb=1dbj=0.02184136741DBJ_L,1DBJ_Hantibody fab fragment7341DBJ
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:24642 靶标:ubiquitin specific peptidase 7
External ID: USP7 FAST DUB HTS Primary
Protocol: Deubiquitinases were purified from E. Coli. Ub-Rho substrate was purchased from Boston BioChem (Cat #: U-555). Assay buffer consisted of 50 mM Tris pH 8, 50 mM NaCl, 0.002% Tween20, 5 mM DTT in MilliQ water. Stop buffer consisted of assay buffer + 0.2% trifluoroacetic acid.

Protocol for Inhibitors of USP7: Primary Screen
1. Reagent, 2.5 uL of USP7 in assay buffer (final concentration of 4 nM) to columns 1-46 of a Greiner 1536 well Black, flat bottom, polystyrene microplate (Griener 782076)
2. Compound, 20 nL of screening compounds (final concentration of 20 uM) to columns 1-46 (columns 45-46: DMSO control)
3. Reagent, 2.5 uL of assay buffer to columns 47-48 on all plates (No enzyme control)
4. Time, Incubate at room temperature for 60 minutes
5. Reagent, 2.5 uL of Ub-Rho in assay buffer (final concentration of 40 nM) to all wells
6. Time, Incubate at room temperature for 10 minutes
7. Detection, Fluorescence, PheraStar, FITC Module
Comment: Normalization of raw data to positive and negative control wells were applied to the data using Helios, a high-throughput screening data analysis program developed at Novartis.(Gubler et al., 2018)

Compounds demonstrating greater than or equal to 30% inhibition of USP7 (USP7_EFFICACY >/= 30) were called as active, compounds demonstrating activity below this threshold were called as inactive.
USP7_EFFICACY
-0.801
-6.934
-7.543
2.861
2.363
-17.749
-0.834
-2.389
0.879
0.233
2.8
-8.773
-0.815
-0.271
7.414
-5.634
0.496
3.06
-13.572
5.477
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:ChEMBL 靶标:N/A
External ID: CHEMBL3301363
Protocol: N/A
Comment: Data Source: AstraZeneca DMPK/physicochemical
Standard TypeStandard Value
LogD7.41.56
LogD7.41.39
LogD7.4-0.78
LogD7.42.22
LogD7.43
LogD7.41.91
LogD7.4-0.84
LogD7.41.19
LogD7.4-1.08
LogD7.43.08
LogD7.43.65
LogD7.4-0.5
LogD7.42.43
LogD7.42.3
LogD7.43.65
LogD7.44.3
LogD7.43.26
LogD7.42.55
LogD7.41.69
LogD7.41.46
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:ChEMBL 靶标:Xanthine dehydrogenase/oxidase
External ID: CHEMBL991725
Protocol: N/A
Comment: Compounds with activity <= 10uM or explicitly reported as active by ChEMBL are flagged as active in this PubChem assay presentation.

Journal: Bioorg. Med. Chem. Lett.
Year: 2008
Volume: 18
Issue: 18
First Page: 5006
Last Page: 5009
DOI: 10.1016/j.bmcl.2008.08.016

Target ChEMBL ID: CHEMBL1929
ChEMBL Target Name: Xanthine dehydrogenase
ChEMBL Target Type: SINGLE PROTEIN - Target is a single protein chain
Relationship Type: H - Homologous protein target assigned
Confidence: Homologous single protein target assigned
PubChem Standard ValueStandard TypeStandard RelationStandard ValueStandard UnitsData Validity Comment
6.6IC50=6600nM
21.8IC50=21800nM
1000IC50>1000000nMOutside typical range
682.6IC50=682600nMOutside typical range
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:ChEMBL 靶标:N/A
External ID: CHEMBL988118
Protocol: N/A
Comment: Compounds with activity <= 10uM or explicitly reported as active by ChEMBL are flagged as active in this PubChem assay presentation.

Journal: Bioorg. Med. Chem. Lett.
Year: 2008
Volume: 18
Issue: 18
First Page: 5006
Last Page: 5009
DOI: 10.1016/j.bmcl.2008.08.016
PubChem Standard ValueStandard TypeStandard RelationStandard ValueStandard Units
0.0489IC50=48.9nM
0.0215IC50=21.5nM
0.0326IC50=32.6nM
1IC50>1000nM
0.0523IC50=52.3nM
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:ChEMBL 靶标:BV-2
External ID: CHEMBL4047079
Protocol: N/A
Comment: Compounds with activity <= 10uM or explicitly reported as active by ChEMBL are flagged as active in this PubChem assay presentation.

Journal: Bioorg Med Chem Lett
Year: 2017
Volume: 27
Issue: 20
First Page: 4765
Last Page: 4769
DOI: 10.1016/j.bmcl.2017.08.047

Target ChEMBL ID: CHEMBL614781
ChEMBL Target Name: BV-2
ChEMBL Target Type: CELL-LINE - Target is a specific cell-line
Relationship Type: N - Non-molecular target assigned
Confidence: Target assigned is non-molecular
PubChem Standard ValueStandard TypeStandard RelationStandard ValueStandard Units
73.02IC50=73020nM
100IC50>100000nM
100IC50>100000nM
100IC50>100000nM
18.66IC50=18660nM
100IC50>100000nM
80.51IC50=80510nM
100IC50>100000nM
100IC50>100000nM
13.19IC50=13190nM
39.56IC50=39560nM
100IC50>100000nM
100IC50>100000nM
100IC50>100000nM
18.46IC50=18460nM
100IC50>100000nM
100IC50>100000nM
100IC50>100000nM
100IC50>100000nM
6.87IC50=6870nM
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:ChEMBL 靶标:Replicase polyprotein 1ab
External ID: CHEMBL4495582
Protocol: N/A
Comment: Target ChEMBL ID: CHEMBL4523582
ChEMBL Target Name: Replicase polyprotein 1ab
ChEMBL Target Type: SINGLE PROTEIN - Target is a single protein chain
Relationship Type: D - Direct protein target assigned
Confidence: Direct single protein target assigned

Data Source: SARS-CoV-2 Screening Data
Standard TypeStandard RelationStandard ValueStandard UnitsData Validity Comment
Inhibition=13.77%
Inhibition=2.35%
Inhibition=21.17%
Inhibition=18.36%
Inhibition=5.381%
Inhibition=18.17%
Inhibition=10.15%
Inhibition=29.56%
Inhibition=18.27%
Inhibition=11.42%
Inhibition=15.4%
Inhibition=7.437%
Inhibition=-3.216%
Inhibition=18%
Inhibition=1.021%
Inhibition=16.4%
Inhibition=2.544%
Inhibition=19.11%
Inhibition=26.15%
Inhibition=5.133%
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:ChEMBL 靶标:Peroxisome proliferator-activated receptor gamma
External ID: CHEMBL1059361
Protocol: N/A
Comment: Journal: J. Med. Chem.
Year: 2009
Volume: 52
Issue: 21
First Page: 6835
Last Page: 6850
DOI: 10.1021/jm900964r

Target ChEMBL ID: CHEMBL235
ChEMBL Target Name: Peroxisome proliferator-activated receptor gamma
ChEMBL Target Type: SINGLE PROTEIN - Target is a single protein chain
Relationship Type: D - Direct protein target assigned
Confidence: Direct single protein target assigned
Standard TypeStandard RelationStandard ValueActivity Comment
FC=5.4
FC=3.4
FC=9.6
FC=1.3
FC=1.7
FC=7.5
FC=4
FC=3.5
FC=5
FC=7.3
FC=1.3
FC=2.6
FC=2.2
FC=2.2
FC=5
FC=7.7
FC=12.8
FC=4.4
FC=6.3
FC=3.8
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:ChEMBL 靶标:Leishmania donovani
External ID: CHEMBL969034
Protocol: N/A
Comment: Compounds with activity <= 10uM or explicitly reported as active by ChEMBL are flagged as active in this PubChem assay presentation.

Journal: J. Nat. Prod.
Year: 2006
Volume: 69
Issue: 1
First Page: 43
Last Page: 49
DOI: 10.1021/np0502600

Target ChEMBL ID: CHEMBL367
ChEMBL Target Name: Leishmania donovani
ChEMBL Target Type: ORGANISM - Target is a complete organism
Relationship Type: N - Non-molecular target assigned
Confidence: Target assigned is non-molecular
PubChem Standard ValueStandard TypeStandard RelationStandard ValueStandard UnitsActivity CommentData Validity Comment
1.5IC50=1500nM
IC50Not Determined
IC50Not Determined
IC50Not Determined
IC50Not Determined
250IC50>250000nMOutside typical range
20.7IC50=20700nM
89.9IC50=89900nM
IC50Not Determined
250IC50>250000nMOutside typical range
100IC50=100000nM
38.4IC50=38400nM
13IC50=13000nM
250IC50>250000nMOutside typical range
250IC50>250000nMOutside typical range
37.3IC50=37300nM
113IC50=113000nMOutside typical range
123IC50=123000nMOutside typical range
IC50Not Determined
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:ChEMBL 靶标:Macrophage migration inhibitory factor
External ID: CHEMBL3804638
Protocol: N/A
Comment: Compounds with activity <= 10uM or explicitly reported as active by ChEMBL are flagged as active in this PubChem assay presentation.

Journal: Bioorg. Med. Chem. Lett.
Year: 2016
Volume: 26
Issue: 12
First Page: 2764
Last Page: 2767
DOI: 10.1016/j.bmcl.2016.04.074

Target ChEMBL ID: CHEMBL2085
ChEMBL Target Name: Macrophage migration inhibitory factor
ChEMBL Target Type: SINGLE PROTEIN - Target is a single protein chain
Relationship Type: D - Direct protein target assigned
Confidence: Direct single protein target assigned
PubChem Standard ValueStandard TypeStandard RelationStandard ValueStandard Units
10.9Ki=10900nM
45.2Ki=45200nM
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:ChEMBL 靶标:Vero
External ID: CHEMBL969036
Protocol: N/A
Comment: Compounds with activity <= 10uM or explicitly reported as active by ChEMBL are flagged as active in this PubChem assay presentation.

Journal: J. Nat. Prod.
Year: 2006
Volume: 69
Issue: 1
First Page: 43
Last Page: 49
DOI: 10.1021/np0502600

Target ChEMBL ID: CHEMBL391
ChEMBL Target Name: Vero
ChEMBL Target Type: CELL-LINE - Target is a specific cell-line
Relationship Type: N - Non-molecular target assigned
Confidence: Target assigned is non-molecular
PubChem Standard ValueStandard TypeStandard RelationStandard ValueStandard UnitsActivity CommentData Validity Comment
IC50Not Determined
IC50Not Determined
IC50Not Determined
135IC50=135000nMOutside typical range
IC50Not Determined
250IC50>250000nMOutside typical range
65.6IC50=65600nM
IC50Not Determined
IC50Not Determined
250IC50>250000nMOutside typical range
159IC50=159000nMOutside typical range
IC50Not Determined
37.5IC50=37500nM
250IC50>250000nMOutside typical range
IC50Not Determined
3.3IC50=3300nM
IC50Not Determined
134IC50=134000nMOutside typical range
0.0012IC50=1.2nM
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:ChEMBL 靶标:Trypanosoma brucei brucei
External ID: CHEMBL969035
Protocol: N/A
Comment: Compounds with activity <= 10uM or explicitly reported as active by ChEMBL are flagged as active in this PubChem assay presentation.

Journal: J. Nat. Prod.
Year: 2006
Volume: 69
Issue: 1
First Page: 43
Last Page: 49
DOI: 10.1021/np0502600

Target ChEMBL ID: CHEMBL612851
ChEMBL Target Name: Trypanosoma brucei brucei
ChEMBL Target Type: ORGANISM - Target is a complete organism
Relationship Type: N - Non-molecular target assigned
Confidence: Target assigned is non-molecular
PubChem Standard ValueStandard TypeStandard RelationStandard ValueStandard UnitsActivity CommentData Validity Comment
IC50Not Determined
IC50Not Determined
100IC50>100000nM
7.1IC50=7100nM
0.19IC50=190nM
43.1IC50=43100nM
32.8IC50=32800nM
12.3IC50=12300nM
90.2IC50=90200nM
130IC50=130000nMOutside typical range
12.7IC50=12700nM
57.9IC50=57900nM
12.1IC50=12100nM
250IC50>250000nMOutside typical range
32.3IC50=32300nM
3.7IC50=3700nM
94.2IC50=94200nM
75.3IC50=75300nM
IC50Not Determined
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:ChEMBL 靶标:Xanthine dehydrogenase/oxidase
External ID: CHEMBL990777
Protocol: N/A
Comment: Journal: Bioorg. Med. Chem. Lett.
Year: 2008
Volume: 18
Issue: 18
First Page: 5006
Last Page: 5009
DOI: 10.1016/j.bmcl.2008.08.016

Target ChEMBL ID: CHEMBL1929
ChEMBL Target Name: Xanthine dehydrogenase
ChEMBL Target Type: SINGLE PROTEIN - Target is a single protein chain
Relationship Type: H - Homologous protein target assigned
Confidence: Homologous single protein target assigned
PubChem Standard ValueStandard TypeStandard RelationStandard ValueStandard UnitsData Validity Comment
1000IC50>1000000nMOutside typical range
11.4IC50=11400nM
1000IC50>1000000nMOutside typical range
1000IC50>1000000nMOutside typical range
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:ICCB-Longwood/NSRB Screening Facility, Harvard Medical School 靶标:N/A
External ID: HMS1482
Protocol: Prior to screening, cells were passaged in high glucose DMEM supplemented with 10% FBS, 1% P/S, 1 mM pyruvate, and HEPES. Media was changed every 1-2 days to prevent starvation and maintain cellular health.

On the day of screening, 384-well plates (Corning 3765) were filled with 30 uL of control cybrid cell suspension (33.3 cells/ul). Media for resuspension was DMEM supplemented with 10% FBS, 1% P/S, 1 mM pyruvate, and HEPES. Positive control columns were 23 and 24 for most plate setups. Initially, tunicamycin (15 nM) and galactose media (10 mM + 1 mM glucosamine) were used in columns 23 and 24, respectively. Over the course of the screen, galactose was substituted with Vidofludimus (11 uM). Next, 33 nL of each compound were pin-transferred to each plate in duplicate. Final assay well volume was 30 uL. Plates were stacked 2 high, covered with lids, and incubated at 37 degrees C for 2 days.

After 2 days of incubation, Hoescht (10 ul/well) was added to assay plates and fluorescence was read using the Acumen laser scanning cytometer. After, the bottom of plates were sealed with two layers of Brightmax Sealing Films. Then Promega NanoGlo Live cell reagent (20 ul/well) was added to each well and luminescence was read on a PerkinElmer EnVision plate reader after 5 minute of shaking.
Comment: Data analysis method and criteria for scoring active compounds:

Normalized luminescence values (luminescence / cell number) for each replicate were calculated (based on average of 2 luminescence reads per replicate). Z-scores were calculated using the plate average and standard deviation of experimental well normalized values. Each plate replicate was individually analyzed to measure reproducibility across plates. Z-scores were then averaged across replicates and a Z-score threshold of 1.96 was selected for positive hits, indicating increased mitochondrial supercomplex formation. Wells were excluded from further consideration based on low cell number (1 or both replicates with number of objects count < 1500). Activity scores were determined by scaling Z-scores from 0 (activity score = 0) to 4 (activity score = 100), with activity score > 50 being considered active. Z-scores < 0 were set to activity score = 0; Z-scores > 4 were set to activity score = 100 (100% activity).
Luminescence_R1_ALuminescence_R2_AHoechst_NumObjects_ALuminescence_R1_BLuminescence_R2_BHoechst_NumObjects_BAvgLumin_ARatio_AAvgLumin_BRatio_BHoescht_AvgRatio_Z scoreCommentMolar Concentration
3005832966014427396274381039475429859267.447938865681.75364590.5-0.5094812 mM
3063983015303313363462354883342330396491.7489359172104.92933680.28240710 mM
3229973242934706384126370237418532364568.772837718290.1274445.5-0.3493792 mM
2814872771794410298737291541441927933363.340829513966.78864414.5-0.82501210 mM
3319403273095409320983313490473232962460.9431723667.04075070.5-0.8614472 mM
101988101433913127273124739927101710111.403126006135.929cell number censor10 mM
12229312250110001354451298281047122397122.397132636126.682cell number censor2 mM
31668831269918422981712925611315314694170.843295366224.613cell number censor10 mM
2586182572734710308202299107470525794654.765530365464.53874707.5-1.006962 mM
7032470701868774087427981170512.581.235675843.593.5185cell number censor10 mM
735767286684281944781318307322186.960880037.596.4307cell number censor2 mM
138603137684180161874155778147138144767.4641588261080.45cell number censor10 mM
3688123655174887445802425830475136716475.130943581691.73144819-0.2155272 mM
3598523457175201364558356321414235278467.830136044087.02064671.5-0.416410 mM
3539193476365169378702373151513035077867.861837592673.285149.5-0.6418412 mM
2634832564394783312776297786467925996154.35130528165.24494731-1.0023510 mM
6959871606920864718552210267060276.741385996.583.8173cell number censor2 mM
3588413473594602354858348321495635310076.727535159070.94224779-0.530435400 uM
3545733465325377378990366658522935055265.194837282471.29935303-0.71949480 uM
3160983101214700323640306279439731311066.61931496071.63054548.5-0.689973400 uM
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:ChEMBL 靶标:N/A
External ID: CHEMBL4823511
Protocol: N/A
Comment: Compounds with activity <= 10uM or explicitly reported as active by ChEMBL are flagged as active in this PubChem assay presentation.

Journal: J Nat Prod
Year: 2021
Volume: 84
Issue: 3.0
First Page: 654
Last Page: 665
DOI: 10.1021/acs.jnatprod.0c01387
PubChem Standard ValueStandard TypeStandard RelationStandard ValueStandard UnitsData Validity Comment
70IC50=70000nM
0.6IC50=600nM
120IC50=120000nMOutside typical range
93IC50=93000nM
63IC50=63000nM
100IC50=100000nM
92IC50=92000nM
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:ChEMBL 靶标:N/A
External ID: CHEMBL1014690
Protocol: N/A
Comment: Journal: J. Nat. Prod.
Year: 1995
Volume: 58
Issue: 2
First Page: 217
Last Page: 225
DOI: 10.1021/np50116a009
Standard TypeActivity Comment
ActivityNot Active
ActivityNot Active
ActivityNot Active
ActivityNot Active
ActivityNot Active
ActivityNot Active
ActivityNot Active
ActivityNot Active
ActivityNot Active
ActivityNot Active
ActivityNot Active
ActivityNot Active
ActivityNot Active
ActivityNot Active
ActivityNot Active
ActivityNot Active
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:ChEMBL 靶标:Tyrosine-protein phosphatase non-receptor type 1
External ID: CHEMBL4035961
Protocol: N/A
Comment: Journal: Bioorg Med Chem
Year: 2017
Volume: 25
Issue: 14
First Page: 3706
Last Page: 3713
DOI: 10.1016/j.bmc.2017.05.009

Target ChEMBL ID: CHEMBL335
ChEMBL Target Name: Protein-tyrosine phosphatase 1B
ChEMBL Target Type: SINGLE PROTEIN - Target is a single protein chain
Relationship Type: D - Direct protein target assigned
Confidence: Direct single protein target assigned
Standard TypeStandard RelationStandard ValueStandard Units
Inhibition=29%
Inhibition=43%
Inhibition=28%
Inhibition=55%
Inhibition=48%
Inhibition=18%
Inhibition=20%
Inhibition=75%
Inhibition=18%
Inhibition=98%
Inhibition=33%
Inhibition=15%
Inhibition=19%
Inhibition=79%
Inhibition=73%
Inhibition=47%
Inhibition=36%
Inhibition=46%
Inhibition=94%
Inhibition=52%
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:ChEMBL 靶标:DNA topoisomerase 2-alpha
External ID: CHEMBL1014691
Protocol: N/A
Comment: Journal: J. Nat. Prod.
Year: 1995
Volume: 58
Issue: 2
First Page: 217
Last Page: 225
DOI: 10.1021/np50116a009

Target ChEMBL ID: CHEMBL1806
ChEMBL Target Name: DNA topoisomerase II alpha
ChEMBL Target Type: SINGLE PROTEIN - Target is a single protein chain
Relationship Type: D - Direct protein target assigned
Confidence: Direct single protein target assigned
Standard TypeActivity Comment
ActivityNot Active
ActivityNot Active
ActivityNot Active
ActivityNot Active
ActivityNot Active
ActivityNot Active
ActivityNot Active
ActivityNot Active
ActivityNot Active
ActivityNot Active
ActivityNot Active
ActivityNot Active
ActivityNot Active
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:ChEMBL 靶标:N/A
External ID: CHEMBL4035959
Protocol: N/A
Comment: Journal: Bioorg Med Chem
Year: 2017
Volume: 25
Issue: 14
First Page: 3706
Last Page: 3713
DOI: 10.1016/j.bmc.2017.05.009
Standard TypeStandard RelationStandard ValueStandard Units
Inhibition=14%
Inhibition=22%
Inhibition=0%
Inhibition=0%
Inhibition=6%
Inhibition=56%
Inhibition=9%
Inhibition=0%
Inhibition=3%
Inhibition=25%
Inhibition=3%
Inhibition=73%
Inhibition=11%
Inhibition=41%
Inhibition=0%
Inhibition=4%
Inhibition=19%
Inhibition=34%
Inhibition=3%
Inhibition=8%
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:ChEMBL 靶标:N/A
External ID: CHEMBL1291750
Protocol: N/A
Comment: Journal: Eur J Med Chem
Year: 2010
Volume: 45
Issue: 11
First Page: 5071
Last Page: 5079
DOI: 10.1016/j.ejmech.2010.08.016
PubChem Standard ValueStandard TypeStandard RelationStandard ValueStandard Units
34ED50=34uM
29ED50=29uM
29ED50=29uM
36ED50=36uM
105ED50=105uM
663ED50=663uM
32ED50=32uM
63ED50=63uM
12ED50=12uM
812ED50=812uM
26ED50=26uM
232ED50=232uM
62ED50=62uM
23ED50=23uM
22ED50=22uM
31ED50=31uM
56ED50=56uM
224ED50=224uM
111ED50=111uM
46ED50=46uM
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:ChEMBL 靶标:RAW264.7
External ID: CHEMBL4035957
Protocol: N/A
Comment: Journal: Bioorg Med Chem
Year: 2017
Volume: 25
Issue: 14
First Page: 3706
Last Page: 3713
DOI: 10.1016/j.bmc.2017.05.009

Target ChEMBL ID: CHEMBL612557
ChEMBL Target Name: RAW264.7
ChEMBL Target Type: CELL-LINE - Target is a specific cell-line
Relationship Type: N - Non-molecular target assigned
Confidence: Target assigned is non-molecular
Standard TypeStandard RelationStandard ValueStandard Units
Inhibition=13%
Inhibition=6%
Inhibition=0%
Inhibition=5%
Inhibition=14%
Inhibition=39%
Inhibition=1%
Inhibition=26%
Inhibition=58%
Inhibition=16%
Inhibition=0%
Inhibition=22%
Inhibition=0%
Inhibition=19%
Inhibition=0%
Inhibition=1%
Inhibition=0%
Inhibition=14%
Inhibition=0%
Inhibition=3%
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:ChEMBL 靶标:HepG2
External ID: CHEMBL4035954
Protocol: N/A
Comment: Journal: Bioorg Med Chem
Year: 2017
Volume: 25
Issue: 14
First Page: 3706
Last Page: 3713
DOI: 10.1016/j.bmc.2017.05.009

Target ChEMBL ID: CHEMBL395
ChEMBL Target Name: HepG2
ChEMBL Target Type: CELL-LINE - Target is a specific cell-line
Relationship Type: N - Non-molecular target assigned
Confidence: Target assigned is non-molecular
Standard TypeStandard RelationStandard ValueStandard Units
GI=29%
GI=28%
GI=3%
GI=18%
GI=0%
GI=14%
GI=22%
GI=6%
GI=21%
GI=2%
GI=0%
GI=5%
GI=6%
GI=40%
GI=39%
GI=0%
GI=13%
GI=24%
GI=7%
GI=0%
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:ChEMBL 靶标:Severe acute respiratory syndrome coronavirus 2
External ID: CHEMBL4513082
Protocol: N/A
Comment: Target ChEMBL ID: CHEMBL4303835
ChEMBL Target Name: SARS-CoV-2
ChEMBL Target Type: ORGANISM - Target is a complete organism
Relationship Type: N - Non-molecular target assigned
Confidence: Target assigned is non-molecular

Data Source: SARS-CoV-2 Screening Data
Standard TypeStandard RelationStandard ValueStandard Units
Inhibition=0.24%
Inhibition=4.58%
Inhibition=-0.3%
Inhibition=-0.3%
Inhibition=-0.04%
Inhibition=-0.04%
Inhibition=-0.08%
Inhibition=-0.08%
Inhibition=-0.08%
Inhibition=-0.08%
Inhibition=0.03%
Inhibition=0%
Inhibition=0.03%
Inhibition=0%
Inhibition=-0.27%
Inhibition=-0.27%
Inhibition=-0.08%
Inhibition=-0.08%
Inhibition=14.41%
Inhibition=0.39%
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:ICCB-Longwood/NSRB Screening Facility, Harvard Medical School 靶标:Cellular tumor antigen p53
External ID: HMS1485
Protocol: Prior to screening, HeLa cells were transduced with a lentivirus carrying the vector PHAGE-N CMVt N-RIG3 p53(R273C) encoding constitutively expressed SGFP2 fused to histone 2B and mRuby-p53(R273C). Following transduction, the cells were selected using neomycin and fluorescent activated cell sorting. The day before the compound treatment, cells were plated (750 cells/well) in a final volume of 30 L/well of Dulbecco's modified Eagle's medium (DMEM) supplemented with 10% (v/v) fetal bovine serum using a Thermo Combi. Plates were spun for 45 s at 500 rpm and incubated overnight (~24 h) at 37 degrees C, 5% CO2.

On the day of the screening, 33 nL of each compound was transferred to assay wells via a custom pin-transfer workstation. Additionally, 33 nL of positive (Velcade 300 M) and negative (DMSO 100%) controls were transferred to each plate into the corresponding columns that did not contain experimental compounds. For every compound library plate, there were two daughter plates (A and B). Plates were stacked 5 high, covered with lids, and incubated at 37 degrees C for 24h and 48h.

Assay plates were read using an Acumen Laser Scanning Cytometer 24h and 48h after compound treatment, using the following settings: For SGFP2 (channel 2), the 488 nm laser was used, with 6 mW output, 600 voltage gain and sensitivity threshold at 1; and for mRuby (channel 3), the 561 nm laser was used, with 8 mW output, 600 voltage gain and sensitivity threshold at 1.
Comment: Total nuclei and %p53 positive was calculated for all wells at 24 and 48h using the Cellista software. Percentage of p53 positive cells values were normalized to the positive and negative controls to determine a normalized percent of p53 activation. This was done on a per plate basis. The proteasome inhibitor Velcade (Adipogen, AG-CR1-3602-M005) at 330 nM was used as positive control while only the vehicle (DMSO, Sigma, D8418, 0.1% final concentration) was used as negative control. From these values the following normalized values were calculated (for both 24h and 48h): Normalized total nuclei = (total nuclei in experimental well / plate average negative control total nuclei) * 100. Normalized %p53 positive = (%p53 positive in experimental well - plate average negative control %p53 positive cells) / (plate average positive control %p53 positive cells - plate average negative control %p53 positive cells) * 100.

Based on the normalized percent p53 positive values, a compound was considered active when replicate average normalized % p53 positive cells > 50% for either or both time points. Activity scores were based on the replicate average normalized %p53 positive cells at 24hr. Values less than 0 were set to 0, and values > 100 were set to 100 (100% activity). Compounds with an activity score > 50 were considered active; some compounds were scored active despite having an activity score < 50 since % p53 positive cells was > 50% only at 48hr.

The average normalized total nuclei values were categorized as:
Very Low: x < 25%
Low: 25% < X > 50%
Medium: 50% < X > 75%
High: x < 75%

The average normalized % of p53 positive cells values were categorized as:
Low: x < 25%
Medium: 25% < X > 50%
Strong: 50% < X > 75%
Very Strong: x < 75%

Compounds that scored as strong or very strong in this classification (at either time point) were selected for follow up.
TotalNuclei_24h_A%Pos_24h_ATotalNuclei_24h_B%Pos_24h_BTotalNuclei_48h_A%Pos_48h_ATotalNuclei_48h_B%Pos_48h_BTotalNuclei_Norm_A_24h%Pos_Norm_A_24hTotalNuclei_Norm_B_24h%Pos_Norm_B_24hTotalNuclei_Norm_A_48h%Pos_Norm_A_48hTotalNuclei_Norm_B_48h%Pos_Norm_B_48hAvg_TotalNuclei_Norm_24hAvg_%Pos_Norm_24hAvg_TotalNuclei_Norm_48hAvg_%Pos_Norm_48hViability 24hViability 48hHit 24hHit 48hMolar Concentration
12080.16612330.32415340.065215670.128107.52413010.014207932114.25262060.301056209111.5408212-0.200936304115.8595194-0.078440722110.88837530.15763207113.7001703-0.139688513HighHighLowLow123 uM
12780.078211730.34116440.30415250.262113.754833-0.105094533108.69288240.324276435119.53918520.073652809112.7541590.076453966111.22385770.109590951116.14667210.075053388HighHighLowLow41 uM
11910.33612510.2414840.13515530.258106.01095940.245203592115.92054210.186320973107.9052012-0.120675332114.82439930.071830244110.96575070.215762282111.3648002-0.024422544HighHighLowLow13.7 uM
12350.0811129015390.06514630.273109.9274012-0.101289898104.615741-0.141493985111.9043832-0.201166278108.17005550.089169202107.2715711-0.121391942110.0372193-0.055998538HighHighLowLow4.6 uM
12740.078511270.17716430.36514100.213113.3987928-0.104686893104.43041640.100269547119.46647280.143794919104.25138630.019813371108.9146046-0.002208673111.85892950.081804145HighHighLowLow1.5 uM
12120118401575013830.0723107.8801702-0.211352536109.7121677-0.141493985114.5220296-0.27590787102.2550832-0.142826051108.796169-0.176423261108.3885564-0.209366961HighHighLowLow500 nM
123201268013610.073514110.142109.6603711-0.211352536117.4958012-0.14149398598.96157604-0.191392377104.3253235-0.062257695113.5780861-0.176423261101.6434498-0.126825036HighHighLowLow10 mM
11450.087311640.25814730.067914790.203101.9164975-0.092729471107.85892160.210907095107.1053648-0.197831653109.35304990.008254066104.88770950.059088812108.2292074-0.094788793HighHighLowLow3.333 mM
13740.29111470.087216030.37414470.0691122.29979690.184057682106.2836625-0.022387884116.55797680.154143755106.987061-0.146525029114.29172970.080834899111.77251890.003809363HighHighLowLow1.111 mM
12080.1661215014450.13815520.0644107.52413010.014207932112.5846991-0.141493985105.0694176-0.11722572114.7504621-0.151957902110.0544146-0.063643027109.9099399-0.134591811HighHighLowLow370 uM
11270.17712080.24814480.20713550.221100.31431670.02915471111.9360630.197248139105.2875548-0.037884645100.18484290.029060815106.12518990.113201424102.7361989-0.004411915HighHighLowLow123 uM
12640.079111330.088314210.49313650.147112.5086924-0.103871615104.9863902-0.020885398103.324320.290978363100.9242144-0.056478042108.7475413-0.062378506102.12426720.11725016HighHighLowLow41 uM
13160.0761210015700.31814720.204117.1372145-0.108083888112.1213876-0.141493985114.15846760.089750998108.83548980.009409997114.6293011-0.124788937111.49697870.049580497HighHighLowLow13.7 uM
13470.14812700.078715580.25715460.259119.8965258-0.010250432117.6811258-0.033997997113.28591880.019608888114.30683920.072986175118.7888258-0.022124215113.7963790.046297531HighHighLowLow4.6 uM
12110.16511810.33914800.2714510.276107.79116020.012849134109.43418080.321544644107.61435160.034557207107.28280960.092636994108.61267050.167196889107.44858060.0635971HighHighLowLow1.5 uM
11920.083912690.078814800.2715360.13106.0999694-0.097349384117.5884635-0.033861407107.61435160.034557207113.5674677-0.076128861111.8442165-0.065605396110.5909096-0.020785827HighHighLowLow500 nM
1241011680.17114890.26914690.136110.4614614-0.211352536108.22957090.092074173108.26876320.033407336108.6136784-0.069193278109.3455161-0.059639182108.4412208-0.017892971HighHighLowLow10 mM
11390.08781049013460.29713270.226101.3824372-0.09205007297.2027567-0.14149398597.870890050.06560371498.114602590.03484046899.29259695-0.11677202997.992746320.050222091HighHighLowLow3.333 mM
11890.084111490.08714700.3414030.214105.8329393-0.097077625106.4689871-0.022661063106.88722760.115048152103.73382620.020969302106.1509632-0.059869344105.31052690.068008727HighHighLowLow1.111 mM
1239011330.26514760.20313910.431110.2834414-0.211352536104.98639020.220468365107.323502-0.042484127102.84658040.271806223107.63491580.004557914105.08504120.114661048HighHighLowLow370 uM
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:ChEMBL 靶标:Polyphenol oxidase 4
External ID: CHEMBL4035963
Protocol: N/A
Comment: Journal: Bioorg Med Chem
Year: 2017
Volume: 25
Issue: 14
First Page: 3706
Last Page: 3713
DOI: 10.1016/j.bmc.2017.05.009

Target ChEMBL ID: CHEMBL6066154
ChEMBL Target Name: Mushroom tyrosinase
ChEMBL Target Type: PROTEIN FAMILY - Target is a group of closely related proteins
Relationship Type: D - Direct protein target assigned
Confidence: Multiple direct protein targets may be assigned
Standard TypeStandard RelationStandard ValueStandard Units
Inhibition=2%
Inhibition=10%
Inhibition=9%
Inhibition=11%
Inhibition=12%
Inhibition=1%
Inhibition=5%
Inhibition=16%
Inhibition=2%
Inhibition=16%
Inhibition=10%
Inhibition=14%
Inhibition=15%
Inhibition=2%
Inhibition=14%
Inhibition=11%
Inhibition=2%
Inhibition=5%
Inhibition=3%
Inhibition=8%
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:ChEMBL 靶标:Death-associated protein kinase 1
External ID: CHEMBL3620066
Protocol: N/A
Comment: Compounds with activity <= 10uM or explicitly reported as active by ChEMBL are flagged as active in this PubChem assay presentation.

Journal: J. Med. Chem.
Year: 2015
Volume: 58
Issue: 18
First Page: 7400
Last Page: 7408
DOI: 10.1021/acs.jmedchem.5b00893

Target ChEMBL ID: CHEMBL2558
ChEMBL Target Name: Death-associated protein kinase 1
ChEMBL Target Type: SINGLE PROTEIN - Target is a single protein chain
Relationship Type: D - Direct protein target assigned
Confidence: Direct single protein target assigned
PubChem Standard ValueStandard TypeStandard RelationStandard ValueStandard UnitsActivity CommentData Validity Comment
8.9IC50=8900nM
280IC50=280000nMOutside typical range
300IC50>300000nMOutside typical range
1.6IC50=1600nM
IC50Not Determined
10IC50=10000nM
21IC50=21000nM
300IC50>300000nMOutside typical range
23IC50=23000nM
IC50Not Determined
87IC50=87000nM
150IC50=150000nMOutside typical range
300IC50>300000nMOutside typical range
220IC50=220000nMOutside typical range
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:24642 靶标:ubiquitin specific peptidase 28
External ID: USP28 FAST DUB HTS Primary
Protocol: Deubiquitinases were purified from E. Coli. Ub-Rho substrate was purchased from Boston BioChem (Cat #: U-555). Assay buffer consisted of 50 mM Tris pH 8, 50 mM NaCl, 0.002% Tween20, 5 mM DTT in MilliQ water. Stop buffer consisted of assay buffer + 0.2% trifluoroacetic acid.

Protocol for Inhibitors of USP28: Primary Screen
1. Compound, 25 nL of screening compounds (final concentration of 25 uM) to columns 1-46 of a Greiner 1536 well Black, flat bottom, polystyrene microplate (Griener 782076) (columns 45-46: DMSO control)
2. Reagent, 2.5 uL of assay buffer to columns 47-48 on all plates (No enzyme control)
3. Reagent, 2.5 uL of USP28 in assay buffer (final concentration of 0.5 nM) to columns 1-46
4. Reagent, 2.5 uL of Ub-Rho in assay buffer (final concentration of 12 nM) to all wells
5. Time, Incubate at room temperature for 30 minutes
6. Reagent, 2.5 uL of stop buffer to all wells
7. Centrifuge plates (5s, 350 rpm)
8. Detection, Fluorescence, PheraStar, FITC Module
Comment: Normalization of raw data to positive and negative control wells were applied to the data using Helios, a high-throughput screening data analysis program developed at Novartis.(Gubler et al., 2018)

Compounds demonstrating greater than or equal to 30% inhibition of USP28 (USP28_EFFICACY >/= 30) were called as active, compounds demonstrating activity below this threshold were called as inactive.
USP28-Efficacy
0.858
-79.548
-6.397
12.687
1.953
1.774
6.852
4.69
11.944
-0.62
6.642
-4.813
10.139
-3.985
6.898
5.589
87.267
-2.429
-1.878
1.221
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:ChEMBL 靶标:MCF7
External ID: CHEMBL4035952
Protocol: N/A
Comment: Journal: Bioorg Med Chem
Year: 2017
Volume: 25
Issue: 14
First Page: 3706
Last Page: 3713
DOI: 10.1016/j.bmc.2017.05.009

Target ChEMBL ID: CHEMBL387
ChEMBL Target Name: MCF7
ChEMBL Target Type: CELL-LINE - Target is a specific cell-line
Relationship Type: N - Non-molecular target assigned
Confidence: Target assigned is non-molecular
Standard TypeStandard RelationStandard ValueStandard Units
GI=6%
GI=21%
GI=0%
GI=11%
GI=0%
GI=10%
GI=26%
GI=0%
GI=0%
GI=2%
GI=2%
GI=0%
GI=17%
GI=3%
GI=16%
GI=1%
GI=27%
GI=86%
GI=73%
GI=15%
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:ChEMBL 靶标:NON-PROTEIN TARGET
External ID: CHEMBL1074833
Protocol: N/A
Comment: Journal: Bioorg. Med. Chem. Lett.
Year: 2010
Volume: 20
Issue: 3
First Page: 1162
Last Page: 1164
DOI: 10.1016/j.bmcl.2009.12.021

Target ChEMBL ID: CHEMBL3879801
ChEMBL Target Name: NON-PROTEIN TARGET
ChEMBL Target Type: NON-MOLECULAR - Target has not been defined at a molecular level, only the non-molecular entity which is affected (e.g., organism, cell line etc)
Relationship Type: N - Non-molecular target assigned
Confidence: Target assigned is non-molecular
PubChem Standard ValueStandard TypeStandard RelationStandard ValueStandard UnitsData Validity Comment
18.1IC50=18100nM
500IC50>500000nMOutside typical range
500IC50>500000nMOutside typical range
65.1IC50=65100nM
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:ChEMBL 靶标:Macrophage migration inhibitory factor
External ID: CHEMBL711481
Protocol: N/A
Comment: Compounds with activity <= 10uM or explicitly reported as active by ChEMBL are flagged as active in this PubChem assay presentation.

Journal: J. Med. Chem.
Year: 2001
Volume: 44
Issue: 4
First Page: 540
Last Page: 547
DOI: 10.1021/jm000386o

Target ChEMBL ID: CHEMBL2085
ChEMBL Target Name: Macrophage migration inhibitory factor
ChEMBL Target Type: SINGLE PROTEIN - Target is a single protein chain
Relationship Type: H - Homologous protein target assigned
Confidence: Homologous single protein target assigned
PubChem Standard ValueStandard TypeStandard RelationStandard ValueStandard Units
0.55Ki=550nM
2.9Ki=2900nM
0.28Ki=280nM
5.8Ki=5800nM
3.1Ki=3100nM
0.47Ki=470nM
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:24642 靶标:ubiquitin specific peptidase 10
External ID: USP10 FAST DUB HTS Primary
Protocol: Deubiquitinases were purified from E. Coli. Ub-Rho substrate was purchased from Boston BioChem (Cat #: U-555). Assay buffer consisted of 50 mM Tris pH 8, 50 mM NaCl, 0.002% Tween20, 5 mM DTT in MilliQ water. Stop buffer consisted of assay buffer + 0.2% trifluoroacetic acid.

Protocol for Inhibitors of USP10: Primary Screen
1. Compound, 20 nL of screening compounds (final concentration of 20 uM) to columns 1-46 of a Greiner 1536 well Black, flat bottom, polystyrene microplate (Griener 782076) (columns 45-46: DMSO control)
2. Reagent, 2.5 uL of assay buffer to columns 47-48 on all plates (No enzyme control)
3. Reagent, 2.5 uL of USP10 in assay buffer (final concentration of 15 nM) to columns 1-46
4. Reagent, 2.5 uL of Ub-Rho in assay buffer (final concentration of 15 nM) to all wells
5. Time, Incubate at room temperature for 60 minutes
6. Detection, Fluorescence, PheraStar, FITC Module
Comment: Normalization of raw data to positive and negative control wells were applied to the data using Helios, a high-throughput screening data analysis program developed at Novartis.(Gubler et al., 2018)

Compounds demonstrating greater than or equal to 30% inhibition of USP10 (USP10_EFFICACY >/= 30) were called as active, compounds demonstrating activity below this threshold were called as inactive.
USP10-Efficacy
3.101
1.907
-3.869
-7.539
0.549
-1.651
0.901
0.0502
0.956
15.834
-0.00175
-4.55
-1.07
1.85
2.992
9.647
0.745
-1.799
3.055
-0.917
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:ChEMBL 靶标:SW480
External ID: CHEMBL4035953
Protocol: N/A
Comment: Journal: Bioorg Med Chem
Year: 2017
Volume: 25
Issue: 14
First Page: 3706
Last Page: 3713
DOI: 10.1016/j.bmc.2017.05.009

Target ChEMBL ID: CHEMBL612544
ChEMBL Target Name: SW480
ChEMBL Target Type: CELL-LINE - Target is a specific cell-line
Relationship Type: N - Non-molecular target assigned
Confidence: Target assigned is non-molecular
Standard TypeStandard RelationStandard ValueStandard Units
GI=21%
GI=28%
GI=43%
GI=22%
GI=16%
GI=7%
GI=25%
GI=24%
GI=19%
GI=12%
GI=4%
GI=31%
GI=34%
GI=13%
GI=20%
GI=13%
GI=9%
GI=81%
GI=58%
GI=18%
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:24642 靶标:ubiquitin C-terminal hydrolase L1
External ID: UCHL1 FAST DUB HTS Primary
Protocol: Deubiquitinases were purified from E. Coli. Ub-Rho substrate was purchased from Boston BioChem (Cat #: U-555). Assay buffer consisted of 50 mM Tris pH 8, 50 mM NaCl, 0.002% Tween20, 5 mM DTT in MilliQ water. Stop buffer consisted of assay buffer + 0.2% trifluoroacetic acid.

Protocol for Inhibitors of UCHL1: Primary Screen
1. Reagent, 2.5 uL of UCHL1 in assay buffer (final concentration of 1 nM) to columns 1-46 of a Greiner 1536 well Black, flat bottom, polystyrene microplate (Griener 782076)
2. Compound, 20 nL of screening compounds (final concentration of 20 uM) to columns 1-46 (columns 45-46: DMSO control)
3. Reagent, 2.5 uL of assay buffer to columns 47-48 on all plates (No enzyme control)
4. Time, Incubate at room temperature for 60 minutes
5. Reagent, 2.5 uL of Ub-Rho in assay buffer (final concentration of 7 nM) to all wells
6. Time, Incubate at room temperature for 10 minutes
7. Detection, Fluorescence, PheraStar, FITC Module
Comment: Normalization of raw data to positive and negative control wells were applied to the data using Helios, a high-throughput screening data analysis program developed at Novartis.(Gubler et al., 2018)

Compounds demonstrating greater than or equal to 30% inhibition of UCHL1 (UCHL1_EFFICACY >/= 30) were called as active, compounds demonstrating activity below this threshold were called as inactive.
UCHL1-Efficacy
-6.982
0.0218
-4.751
4.329
-3.437
4.201
2.693
2.036
0.352
0.0185
-3.604
0.268
9.86
0.843
3.782
-17.728
4.105
11.718
6.238
-0.64
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:ChEMBL 靶标:Tyrosinase
External ID: CHEMBL1074831
Protocol: N/A
Comment: Compounds with activity <= 10uM or explicitly reported as active by ChEMBL are flagged as active in this PubChem assay presentation.

Journal: Bioorg. Med. Chem. Lett.
Year: 2010
Volume: 20
Issue: 3
First Page: 1162
Last Page: 1164
DOI: 10.1016/j.bmcl.2009.12.021

Target ChEMBL ID: CHEMBL5346
ChEMBL Target Name: Tyrosinase
ChEMBL Target Type: SINGLE PROTEIN - Target is a single protein chain
Relationship Type: D - Direct protein target assigned
Confidence: Direct single protein target assigned
PubChem Standard ValueStandard TypeStandard RelationStandard ValueStandard UnitsData Validity Comment
11.21IC50=11210nM
30.26IC50=30260nM
500IC50>500000nMOutside typical range
500IC50>500000nMOutside typical range
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:24642 靶标:OTU deubiquitinase 3
External ID: OTUD3 FAST DUB HTS Primary
Protocol: Deubiquitinases were purified from E. Coli. Ub-Rho substrate was purchased from Boston BioChem (Cat #: U-555). Assay buffer consisted of 50 mM Tris pH 8, 50 mM NaCl, 0.002% Tween20, 5 mM DTT in MilliQ water. Stop buffer consisted of assay buffer + 0.2% trifluoroacetic acid.

Protocol for Inhibitors of OTUD3: Primary Screen
1. Compound, 25 nL of screening compounds (final concentration of 25 uM) to columns 1-46 of a Greiner 1536 well Black, flat bottom, polystyrene microplate (Griener 782076) (columns 45-46: DMSO control)
2. Reagent, 2.5 uL of assay buffer to columns 47-48 on all plates (No enzyme control)
3. Reagent, 2.5 uL of OTUD3 in assay buffer (final concentration of 12 nM) to columns 1-46
4. Reagent, 2.5 uL of Ub-Rho in assay buffer (final concentration of 40 nM) to all wells
5. Time, Incubate at room temperature for 2 hours
6. Reagent, 2.5 uL of stop buffer to all wells
7. Centrifuge plates (5s, 350 rpm)
8. Detection, Fluorescence, PheraStar, FITC Module
Comment: Normalization of raw data to positive and negative control wells were applied to the data using Helios, a high-throughput screening data analysis program developed at Novartis.(Gubler et al., 2018)

Compounds demonstrating greater than or equal to 30% inhibition of OTUD3 (OTUD3_EFFICACY >/= 30) were called as active, compounds demonstrating activity below this threshold were called as inactive.
OTUD3-Efficacy
-7.265
7.071
-1.861
-3.016
-10.763
10.254
-10.529
4.602
-4.313
-5.645
0.343
8.993
-2.623
-1.623
-18.682
11.86
40.974
6.117
17.524
-56.479
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:ChEMBL 靶标:Melan-a
External ID: CHEMBL1074832
Protocol: N/A
Comment: Compounds with activity <= 10uM or explicitly reported as active by ChEMBL are flagged as active in this PubChem assay presentation.

Journal: Bioorg. Med. Chem. Lett.
Year: 2010
Volume: 20
Issue: 3
First Page: 1162
Last Page: 1164
DOI: 10.1016/j.bmcl.2009.12.021

Target ChEMBL ID: CHEMBL4296474
ChEMBL Target Name: Melan-a
ChEMBL Target Type: CELL-LINE - Target is a specific cell-line
Relationship Type: N - Non-molecular target assigned
Confidence: Target assigned is non-molecular
PubChem Standard ValueStandard TypeStandard RelationStandard ValueStandard UnitsData Validity Comment
12.23IC50=12230nM
98.05IC50=98050nM
500IC50>500000nMOutside typical range
500IC50>500000nMOutside typical range
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:ChEMBL 靶标:Helicobacter pylori
External ID: CHEMBL695724
Protocol: N/A
Comment: Journal: Bioorg. Med. Chem. Lett.
Year: 1999
Volume: 9
Issue: 8
First Page: 1109
Last Page: 1112
DOI: 10.1016/s0960-894x(99)00141-9

Target ChEMBL ID: CHEMBL612600
ChEMBL Target Name: Helicobacter pylori
ChEMBL Target Type: ORGANISM - Target is a complete organism
Relationship Type: N - Non-molecular target assigned
Confidence: Target assigned is non-molecular
Standard TypeStandard RelationStandard ValueStandard Units
MIC>20ug.mL-1
MIC>20ug.mL-1
MIC=7.8ug.mL-1
MIC>20ug.mL-1
MIC>20ug.mL-1
MIC>20ug.mL-1
MIC>20ug.mL-1
MIC>20ug.mL-1
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:24642 靶标:ubiquitin specific peptidase 30
External ID: USP30 FAST DUB HTS Primary
Protocol: Deubiquitinases were purified from E. Coli. Ub-Rho substrate was purchased from Boston BioChem (Cat #: U-555). Assay buffer consisted of 50 mM Tris pH 8, 50 mM NaCl, 0.002% Tween20, 5 mM DTT in MilliQ water. Stop buffer consisted of assay buffer + 0.2% trifluoroacetic acid.

Protocol for Inhibitors of USP30: Primary Screen
1. Compound, 25 nL of screening compounds (final concentration of 25 uM) to columns 1-46 of a Greiner 1536 well Black, flat bottom, polystyrene microplate (Griener 782076) (columns 45-46: DMSO control)
2. Reagent, 2.5 uL of assay buffer to columns 47-48 on all plates (No enzyme control)
3. Reagent, 2.5 uL of USP30 in assay buffer (final concentration of 1 nM) to columns 1-46
4. Reagent, 2.5 uL of Ub-Rho in assay buffer (final concentration of 12 nM) to all wells
5. Time, Incubate at room temperature for 2 hours
6. Reagent, 2.5 uL of stop buffer to all wells
7. Centrifuge plates (5s, 350 rpm)
8. Detection, Fluorescence, PheraStar, FITC Module
Comment: Normalization of raw data to positive and negative control wells were applied to the data using Helios, a high-throughput screening data analysis program developed at Novartis.(Gubler et al., 2018)

Compounds demonstrating greater than or equal to 30% inhibition of USP30 (USP30_EFFICACY >/= 30) were called as active, compounds demonstrating activity below this threshold were called as inactive.
USP30-Efficacy
34.821
21.39
49.071
-39.208
23.815
-0.611
-9.086
-8.452
-5.803
-4.031
-6.381
-5.714
0
-29.453
16.548
14.427
0.972
-91.869
18.058
78.672