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1399840-35-7 靶点实验数据

HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:ChEMBL 靶标:5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
External ID: CHEMBL1244610
Protocol: N/A
Comment: Journal: Nat. Chem. Biol.
Year: 2009
Volume: 5
Issue: 4
First Page: 251
Last Page: 257
DOI: 10.1038/nchembio.153

Target ChEMBL ID: CHEMBL1250374
ChEMBL Target Name: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
ChEMBL Target Type: SINGLE PROTEIN - Target is a single protein chain
Relationship Type: H - Homologous protein target assigned
Confidence: Homologous single protein target assigned
Standard TypeStandard UnitsActivity Comment
Inhibition%Dose-dependent effect
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:ChEMBL 靶标:Vibrio cholerae
External ID: CHEMBL1244609
Protocol: N/A
Comment: Journal: Nat. Chem. Biol.
Year: 2009
Volume: 5
Issue: 4
First Page: 251
Last Page: 257
DOI: 10.1038/nchembio.153

Target ChEMBL ID: CHEMBL614402
ChEMBL Target Name: Vibrio cholerae
ChEMBL Target Type: ORGANISM - Target is a complete organism
Relationship Type: N - Non-molecular target assigned
Confidence: Target assigned is non-molecular
Standard TypeActivity Comment
ActivityNot Active
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:Shanghai Institute of Organic Chemistry 靶标:N/A
External ID: PDBbind-Ki for protein-ligand complexes
Protocol:
Comment:
PDBbind Data LinkAffinity_QuilifierKiPubMedProtein TargetProtein NameMMDBPDB
http://www.pdbbind.org.cn/quickpdb.asp?quickpdb=1mto=0.11123900231MTO_A,1MTO_B6-phosphofructokinase214801MTO
http://www.pdbbind.org.cn/quickpdb.asp?quickpdb=1mu6=0.0042125703691MU6_Bthrombin alpha267361MU6
http://www.pdbbind.org.cn/quickpdb.asp?quickpdb=1mue=0.0023126572811MUE_Bthrombin alpha267381MUE
http://www.pdbbind.org.cn/quickpdb.asp?quickpdb=1mx1>100127258621MX1_Acarboxylesterase i226511MX1
http://www.pdbbind.org.cn/quickpdb.asp?quickpdb=1mxo=0.0011MXO_Abeta-lactamase220611MXO
http://www.pdbbind.org.cn/quickpdb.asp?quickpdb=1my8=0.0351MY8_Abeta-lactamase220641MY8
http://www.pdbbind.org.cn/quickpdb.asp?quickpdb=1n1v=140125074791N1V_Aneuraminidase (sialidase)218101N1V
http://www.pdbbind.org.cn/quickpdb.asp?quickpdb=1n2v=83126460241N2V_Aqueuine tRNA-ribosyltransferase226611N2V
http://www.pdbbind.org.cn/quickpdb.asp?quickpdb=1n3i=0.0013127556071N3I_A,1N3I_Bpurine nucleoside phosphorylase246461N3I
http://www.pdbbind.org.cn/quickpdb.asp?quickpdb=1n46=3.0E-5125659331N46_Athyroid hormone receptor beta-1226621N46
http://www.pdbbind.org.cn/quickpdb.asp?quickpdb=1n4h=0.28129585911N4H_Anuclear receptor ror-beta246471N4H
http://www.pdbbind.org.cn/quickpdb.asp?quickpdb=1n5r=2.2125059791N5R_Aacetylcholinesterase218341N5R
http://www.pdbbind.org.cn/quickpdb.asp?quickpdb=1n7i=0.26146958181N7I_Aphenylethanolamine n-methyltransferase255971N7I
http://www.pdbbind.org.cn/quickpdb.asp?quickpdb=1nc1=0.75124962431NC1_A,1NC1_Bmta/sah nucleosidase252501NC1
http://www.pdbbind.org.cn/quickpdb.asp?quickpdb=1nc3=10124962431NC3_A,1NC3_Bmta/sah nucleosidase223901NC3
http://www.pdbbind.org.cn/quickpdb.asp?quickpdb=1nde=0.015124590171NDE_Aestrogen receptor beta215441NDE
http://www.pdbbind.org.cn/quickpdb.asp?quickpdb=1ndz=0.0077147090461NDZ_Aadenosine deaminase256131NDZ
http://www.pdbbind.org.cn/quickpdb.asp?quickpdb=1nhv=2.2125094361NHV_Arna-dependent rna polymerase224031NHV
http://www.pdbbind.org.cn/quickpdb.asp?quickpdb=1nny=0.022126702291NNY_Atyrosine phosphatase 1b226961NNY
http://www.pdbbind.org.cn/quickpdb.asp?quickpdb=1noj=70086525101NOJ_Aglycogen phosphorylase569921NOJ
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:ChEMBL 靶标:S-methyl-5'-thioadenosine phosphorylase
External ID: CHEMBL1244607
Protocol: N/A
Comment: Journal: Nat Chem Biol
Year: 2009
Volume: 5
Issue: 4
First Page: 251
Last Page: 257
DOI: 10.1038/nchembio.153

Target ChEMBL ID: CHEMBL4941
ChEMBL Target Name: S-methyl-5-thioadenosine phosphorylase
ChEMBL Target Type: SINGLE PROTEIN - Target is a single protein chain
Relationship Type: D - Direct protein target assigned
Confidence: Direct single protein target assigned
Standard TypeStandard RelationStandard ValueStandard Units
INH=86pM
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:ChEMBL 靶标:S-methyl-5'-thioadenosine phosphorylase
External ID: CHEMBL1244606
Protocol: N/A
Comment: Journal: Nat Chem Biol
Year: 2009
Volume: 5
Issue: 4
First Page: 251
Last Page: 257
DOI: 10.1038/nchembio.153

Target ChEMBL ID: CHEMBL4941
ChEMBL Target Name: S-methyl-5-thioadenosine phosphorylase
ChEMBL Target Type: SINGLE PROTEIN - Target is a single protein chain
Relationship Type: D - Direct protein target assigned
Confidence: Direct single protein target assigned
Standard TypeStandard RelationStandard ValueStandard Units
INH=86pM
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:ChEMBL 靶标:Staphylococcus aureus
External ID: CHEMBL4296184
Protocol: N/A
Comment: Compounds with activity <= 10uM or explicitly reported as active by ChEMBL are flagged as active in this PubChem assay presentation.

Target ChEMBL ID: CHEMBL352
ChEMBL Target Name: Staphylococcus aureus
ChEMBL Target Type: ORGANISM - Target is a complete organism
Relationship Type: N - Non-molecular target assigned
Confidence: Target assigned is non-molecular

Data Source: CO-ADD Antimicrobial Screening
PubChem Standard ValueStandard TypeStandard RelationStandard ValueStandard UnitsActivity CommentData Validity Comment
10MIC>10000nMMedian N= 2; Maxinhib 24.4 Pct
20MIC>20000nMMedian N= 2; Maxinhib -0.9 Pct
5MIC=5000nMMedian N= 2
Inhibition=7.42%Average; N=2
0.0781MIC<=78.1nMMedian N= 2
Inhibition=5.44%Average; N=2
Inhibition=-0.36%Average; N=2
Inhibition=-1.51%Average; N=2
Inhibition=9.71%Average; N=2
20MIC>20000nMMedian N= 2; Maxinhib 6.2 Pct
10MIC>10000nMMedian N= 2; Maxinhib 14.7 Pct
Inhibition=13.34%Average; N=2
Inhibition=5.78%Average; N=2
Inhibition=15.7%Average; N=2
20MIC>20000nMMedian N= 2; Maxinhib 11.5 Pct
5MIC=5000nMMedian N= 2
5MIC=5000nMMedian N= 2
Inhibition=9.69%Average; N=2
2.5MIC=2500nMMedian N= 2; Range 5 - 2.5 Um
Inhibition=12.6%Average; N=2
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:NCGC 靶标:N/A
External ID: ACC-ATC-p1-SW13-72hr
Protocol: PROTOCOL TABLE (as described by Inglese J, Shamu CE and Guy RK. 2007)
SEQUENCE No. (e.g., 1, 2, 3, etc.); PARAMETER (e.g., Cells, Incubation, Reagent, etc.); VALUE; DESCRIPTION.
1; Cells; 5 uL; white, solid-bottom, 1536-well tissue-culture treated plates.
2; Time; overnight culture at 37C with 5% CO2.
3; Compounds and control; 23 nL; Kalypsis pin tool (Wako USA) equipped with a 1536-well pin head to transfer to the assay plates.
4; Time; 48 hours; 37C with 5% CO2.
5; Reagent; 4 uL; CellTiter-Glo luminescent substrate mix.
6; Time; 20 min at room temperature.
7; Detection; Luminescence; ViewLux plate reader

NOTES (numbers refer to Sequence numbers above)
1. SW13 cells were harvested from a T175 flask and resuspended in ITS-supplemented DMEM serum-free medium at a concentration of 300 000 cells/mL. Then 5 uL of resuspended cells were dispensed into each well of white, solid-bottom, 1536-well tissue-culture-treated plates using a multidrop combi dispenser. The plates were covered with stainless steel gasket lids.
2-3. The plates were cultured overnight at 37C with 5% CO2. Twenty-three nL of compounds (eight selected concentrations from the NPC / MIPE) or positive control (10 mM stock of bortezomib) in DMSO was transferred to each well of the assay plate using a pin tool (Kalypsys, San Diego, CA, USA). The final concentration of the compounds in the 5 uL assay volume ranged from 0.5 nM to 46 uM.
4-6. After 48 hours of incubation at 37C and 5% CO2, 4 uL of CellTilter-Glo luminescent substrate mix (Promega, Madison, WI, USA) was added to each well. Then the plates were incubated for 20 minutes at room temperature.
7. After incubation, luminescence was measured using a ViewLux plate reader (PerkinElmer, Waltham, MA, USA) with a clear filter was used to measure the number of metabolically competent cells. To determine compound activity in the qHTS assay, the titration-response data for each sample was plotted and modeled by a four-parameter logistic fit yielding IC50 and efficacy (maximal response) values. Raw plate reads for each titration point were normalized relative to positive control (doxorubicin hydrochloride, 100% inhibition) and DMSO-only wells (basal, 0%).

REFERENCES:
Inglese J, Shamu CE and Guy RK, Reporting data from high throughput screening of small molecule libraries, Nature Chemical Biology, 2007, 3(8): 438-441. doi.org/10.1038/nchembio0807-438.
Comment: Although all reasonable efforts have been made to ensure the accuracy and reliability of the data, caution should be exercised when interpreting the results as artifacts are possible from nonspecific effects such as assay signal interference. The curve fitting and activity calls presented here are based on the NCATS analysis methods [1].

Compound Ranking:
1. Compounds are first classified as having full titration curves, partial modulation, partial curve (weaker actives), single point activity (at highest concentration only), or inactive. For this assay, apparent cytotoxic compounds are ranked higher than compounds that showed no activity.
2. For all inactive compounds, with a ratio activity curve class of 4, PUBCHEM_ACTIVITY_SCORE is 0. For all active compounds, a score range was given for each curve class type given above. Active compounds have PUBCHEM_ACTIVITY_SCORE between 40 and 100. For a ratio activity curve class = -1.1, score = 80+abs((log_ac50+4.5)*inf_activity/20). For ratio.curve_class == -1.2 && abs(ratio.max_response) > 6*10, score = 60+abs((log_ac50+4.5)*inf_activity/20). For ratio.curve_class == -2.1 || ( ratio.curve_class==-2.2 && abs(ratio.max_response) > 6*10), score = 40+abs((log_ac50+4.5)*inf_activity/20). For ratio.curve_class == -1.2 || ratio.curve_class == -2.2, score = 20+abs((log_ac50+4.5)*inf_activity/20). Inconclusive compounds, with a donor curve class other than 4, have PUBCHEM_ACTIVITY_SCORE of 10. Inconclusive compounds have PUBCHEM_ACTIVITY_SCORE between 1 and 39.

Reference:
1. Inglese J, Auld DS, Jadhav A, et al. Quantitative high-throughput screening: a titration-based approach that efficiently identifies biological activities in large chemical libraries. Proc Natl Acad Sci U S A. 2006;103(31):11473-11478.
PhenotypePotencyEfficacyAnalysis CommentActivity_ScoreCurve_DescriptionFit_LogAC50Fit_HillSlopeFit_R2Fit_InfiniteActivityFit_ZeroActivityFit_CurveClassExcluded_PointsMax_ResponseActivity at 0.0000295000 uMActivity at 0.0000702000 uMActivity at 0.0001470000 uMActivity at 0.0002789751 uMActivity at 0.0006536651 uMActivity at 0.0007370000 uMActivity at 0.00154 uMActivity at 0.00298 uMActivity at 0.00686 uMActivity at 0.015 uMActivity at 0.022 uMActivity at 0.039 uMActivity at 0.068 uMActivity at 0.151 uMActivity at 0.366 uMActivity at 0.587 uMActivity at 0.891 uMActivity at 1.774 uMActivity at 3.811 uMActivity at 9.172 uMActivity at 15.43 uMActivity at 20.05 uMActivity at 46.10 uMActivity at 92.75 uMActivity at 177.8 uMActivity at 231.0 uMCompound QC
Cytotoxic0.008996.842297Complete curve; high efficacy-8.050.90.9852-93.80083.0415-1.10 0 0 0 0 0 0-96.2847-38.4786-66.4622-77.3502-89.6631-91.1299-96.5028-96.2847QC'd by Axon Medchem
Cytotoxic0.0126116.159696Complete curve; high efficacy-7.94.95490.9986-91.653124.5065-1.10 0 0 0 0 0 0-88.639718.2497-83.1959-91.1439-93.0365-93.1434-92.5843-88.6397QC'd by MedChem Express
Cytotoxic0.010385.277895Complete curve; high efficacy-7.98624.44950.9995-87.6205-2.3426-1.10 0 0 0 0 0 0-86.413-2.7201-73.3997-87.2288-88.5055-88.2291-87.6827-86.413QC'd by Tocris
Cytotoxic0.020696.361795Complete curve; high efficacy-7.68624.0950.9987-96.7659-0.4042-1.10 0 0 0 0 0 0-98.94260.0996-20.1867-93.3514-97.0709-97.2208-97.2302-98.9426QC'd by Enzo
Cytotoxic0.020699.543895Complete curve; high efficacy-7.68624.0950.9994-96.50723.0366-1.10 0 0 0 0 0 0-97.48213.7366-17.982-93.9236-96.7265-97.2494-96.5257-97.4821QC'd by Selleck
Cytotoxic0.0316112.430995Complete curve; high efficacy-7.54.95490.9994-98.758313.6727-1.10 0 0 0 0 0 0-99.755814.1832-0.4331-97.5593-97.6378-97.8092-98.5164-99.7558QC'd by Aobious
Cytotoxic0.0461110.332494Complete curve; high efficacy-7.33620.80.9969-101.75538.577-1.10 0 0 0 0 0 0-100.3504-0.3527-26.4158-56.4182-82.3083-99.1138-99.3543-100.3504QC'd by Sequoia
Cytotoxic0.018488.474694Complete curve; high efficacy-7.73623.67720.9998-86.39842.0762-1.10 0 0 0 0 0 0-86.56181.9668-24.61-85.5144-87.2711-85.8733-86.6886-86.5618QC'd by Prestwick
Cytotoxic0.0517123.080994Complete curve; high efficacy-7.28620.70.9916-102.144920.9359-1.10 0 0 0 0 0 0-97.849.5237-19.6599-43.1797-79.7517-97.3528-97.3421-97.84QC'd by Microsource
Cytotoxic0.008294.799394Complete curve; high efficacy-8.08622.09370.9761-76.799318-1.10 0 0 0 0 0 0-82.15628.1614-54.3611-66.209-75.1501-81.0369-79.2354-82.1562QC'd by Prestwick Chemical; Inc.
Cytotoxic0.014179.456994Complete curve; high efficacy-7.854.50450.9952-83.7216-4.2647-1.10 0 0 0 0 0 0-85.5126-7.3039-72.9736-81.9955-81.6153-82.8432-87.2099-85.5126QC'd by MedChem Express
Cytotoxic0.0447115.034794Complete curve; high efficacy-7.352.24810.9995-98.380516.6542-1.10 0 0 0 0 0 0-100.593614.2628-1.185-61.9772-97.1837-97.5484-97.7176-100.5936QC'd by Prestwick
Cytotoxic0.014191.747194Complete curve; high efficacy-7.854.0950.953-85.69656.0506-1.10 0 0 0 0 0 0-99.87930.9645-70.0934-80.1496-77.6019-83.0715-88.3901-99.8793QC'd by MedChem Express
Cytotoxic0.0823114.497794Complete curve; high efficacy-7.08440.60.9935-104.89289.6049-1.10 0 0 0 0 0 0-97.66560.83723.4389-12.0142-45.2343-57.7356-86.0048-97.6656QC'd by Tocris
Cytotoxic0.025983.006393Complete curve; high efficacy-7.58624.95490.9989-82.44460.5616-1.10 0 0 0 0 0 0-82.65710.0843-3.8554-84.2992-82.9204-82.0566-80.3274-82.6571QC'd by Prestwick Chemical; Inc.
Cytotoxic0.082109.52493Complete curve; high efficacy-7.08622.25260.999-97.195712.3283-1.10 0 0 0 0 0 0-99.995512.08039.5591-34.4907-94.413-95.4874-95.4197-99.9955QC'd by ChemDiv
Cytotoxic0.0751110.747793Complete curve; high efficacy-7.12462.90230.9997-98.877611.8702-1.10 0 0 0 0 0 0-101.101811.947311.457311.1917-73.0923-96.5378-98.2604-101.1018QC'd by Glixx
Cytotoxic0.0447103.525293Complete curve; high efficacy-7.352.18760.9822-90.59612.9293-1.10 0 0 0 0 0 0-98.04769.6963-2.8478-57.0341-80.6023-86.0442-97.1114-98.0476QC'd by Cayman
Cytotoxic0.0708101.952193Complete curve; high efficacy-7.152.25260.9984-97.38624.5659-1.10 0 0 0 0 0 0-97.77730.88261.5637-39.785-97.032-97.6566-96.8338-97.7773QC'd by Tocris
Cytotoxic0.0282104.600993Complete curve; high efficacy-7.551.75290.9966-82.137722.4632-1.10 0 0 0 0 0 0-80.19414.2349-16.7002-61.8484-78.3271-84.9605-85.0287-80.194QC'd by Selleck
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:ChEMBL 靶标:Klebsiella pneumoniae
External ID: CHEMBL4296186
Protocol: N/A
Comment: Compounds with activity <= 10uM or explicitly reported as active by ChEMBL are flagged as active in this PubChem assay presentation.

Target ChEMBL ID: CHEMBL350
ChEMBL Target Name: Klebsiella pneumoniae
ChEMBL Target Type: ORGANISM - Target is a complete organism
Relationship Type: N - Non-molecular target assigned
Confidence: Target assigned is non-molecular

Data Source: CO-ADD Antimicrobial Screening
PubChem Standard ValueStandard TypeStandard RelationStandard ValueStandard UnitsActivity CommentData Validity Comment
Inhibition=0.93%Average; N=2
Inhibition=16.87%Average; N=4
Inhibition=14.36%Average; N=4
Inhibition=8.63%Average; N=2
Inhibition=22.77%Average; N=2
MIC>32ug.mL-1Median N= 2; Maxinhib 12.7 Pct
Inhibition=-22.42%Average; N=2Outside typical range
Inhibition=0.23%Average; N=4
MIC>32ug.mL-1Median N= 2; Maxinhib 20.1 Pct
Inhibition=10.23%Average; N=4
Inhibition=3.15%Average; N=4
Inhibition=7.81%Average; N=4
Inhibition=-10.52%Average; N=4Outside typical range
MIC>32ug.mL-1Median N= 2; Maxinhib 19.8 Pct
Inhibition=7.19%Average; N=4
Inhibition=6.16%Average; N=2
Inhibition=11.98%Average; N=4
Inhibition=3.45%Average; N=2
Inhibition=3.96%Average; N=2
Inhibition=4.88%Average; N=2
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:ChEMBL 靶标:Escherichia coli
External ID: CHEMBL4296185
Protocol: N/A
Comment: Compounds with activity <= 10uM or explicitly reported as active by ChEMBL are flagged as active in this PubChem assay presentation.

Target ChEMBL ID: CHEMBL354
ChEMBL Target Name: Escherichia coli
ChEMBL Target Type: ORGANISM - Target is a complete organism
Relationship Type: N - Non-molecular target assigned
Confidence: Target assigned is non-molecular

Data Source: CO-ADD Antimicrobial Screening
PubChem Standard ValueStandard TypeStandard RelationStandard ValueStandard UnitsActivity CommentData Validity Comment
10MIC>10000nMMedian N= 2; Maxinhib 62.6 Pct
20MIC>20000nMMedian N= 2; Maxinhib 7.3 Pct
0.625MIC=625nMMedian N= 2
Inhibition=3.55%Average; N=2
10MIC=10000nMMedian N= 2
Inhibition=-0.79%Average; N=2
Inhibition=-2.76%Average; N=2
Inhibition=6.59%Average; N=2
Inhibition=3.05%Average; N=2
20MIC>20000nMMedian N= 2; Maxinhib 8.1 Pct
10MIC>10000nMMedian N= 2; Maxinhib 17.5 Pct
Inhibition=-6.11%Average; N=2
Inhibition=3.59%Average; N=2
Inhibition=-1.89%Average; N=2
20MIC>20000nMMedian N= 2; Maxinhib 7.5 Pct
1.25MIC=1250nMMedian N= 2; Range 2.5 - 1.25 Um
2.5MIC=2500nMMedian N= 2
Inhibition=2.4%Average; N=2
5MIC=5000nMMedian N= 2; Range 10 - 5 Um
Inhibition=-4.2%Average; N=2
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:ChEMBL 靶标:5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
External ID: CHEMBL1244617
Protocol: N/A
Comment: Compounds with activity <= 10uM or explicitly reported as active by ChEMBL are flagged as active in this PubChem assay presentation.

Journal: Nat. Chem. Biol.
Year: 2009
Volume: 5
Issue: 4
First Page: 251
Last Page: 257
DOI: 10.1038/nchembio.153

Target ChEMBL ID: CHEMBL1250346
ChEMBL Target Name: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
ChEMBL Target Type: SINGLE PROTEIN - Target is a single protein chain
Relationship Type: D - Direct protein target assigned
Confidence: Direct single protein target assigned
PubChem Standard ValueStandard TypeStandard RelationStandard ValueStandard UnitsActivity Comment
InhibitionDose-dependent effect
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:NCGC 靶标:N/A
External ID: ACC-ATC-p1-H295R-72hr
Protocol: PROTOCOL TABLE (as described by Inglese J, Shamu CE and Guy RK. 2007)
SEQUENCE No. (e.g., 1, 2, 3, etc.); PARAMETER (e.g., Cells, Incubation, Reagent, etc.); VALUE; DESCRIPTION.
1; Cells; 5 uL; white, solid-bottom, 1536-well tissue-culture treated plates.
2; Time; overnight culture at 37C with 5% CO2.
3; Compounds and control; 23 nL; Kalypsis pin tool (Wako USA) equipped with a 1536-well pin head to transfer to the assay plates.
4; Time; 48 hours; 37C with 5% CO2.
5; Reagent; 4 uL; CellTiter-Glo luminescent substrate mix.
6; Time; 20 min at room temperature.
7; Detection; Luminescence; ViewLux plate reader

NOTES (numbers refer to Sequence numbers above)
1. NCI-H295R cells were harvested from a T175 flask and resuspended in ITS-supplemented DMEM serum-free medium at a concentration of 300 000 cells/mL. Then 5 uL of resuspended cells were dispensed into each well of white, solid-bottom, 1536-well tissue-culture-treated plates using a multidrop combi dispenser. The plates were covered with stainless steel gasket lids.
2-3. The plates were cultured overnight at 37C with 5% CO2. Twenty-three nL of compounds (eight selected concentrations from the NPC / MIPE) or positive control (10 mM stock of bortezomib) in DMSO was transferred to each well of the assay plate using a pin tool (Kalypsys, San Diego, CA, USA). The final concentration of the compounds in the 5 uL assay volume ranged from 0.5 nM to 46 uM.
4-6. After 48 hours of incubation at 37C and 5% CO2, 4 uL of CellTilter-Glo luminescent substrate mix (Promega, Madison, WI, USA) was added to each well. Then the plates were incubated for 20 minutes at room temperature.
7. After incubation, luminescence was measured using a ViewLux plate reader (PerkinElmer, Waltham, MA, USA) with a clear filter was used to measure the number of metabolically competent cells. To determine compound activity in the qHTS assay, the titration-response data for each sample was plotted and modeled by a four-parameter logistic fit yielding IC50 and efficacy (maximal response) values. Raw plate reads for each titration point were normalized relative to positive control (doxorubicin hydrochloride, 100% inhibition) and DMSO-only wells (basal, 0%).

REFERENCES:
Inglese J, Shamu CE and Guy RK, Reporting data from high throughput screening of small molecule libraries, Nature Chemical Biology, 2007, 3(8): 438-441. doi.org/10.1038/nchembio0807-438.
Comment: Although all reasonable efforts have been made to ensure the accuracy and reliability of the data, caution should be exercised when interpreting the results as artifacts are possible from nonspecific effects such as assay signal interference. The curve fitting and activity calls presented here are based on the NCATS analysis methods [1].

Compound Ranking:
1. Compounds are first classified as having full titration curves, partial modulation, partial curve (weaker actives), single point activity (at highest concentration only), or inactive. For this assay, apparent cytotoxic compounds are ranked higher than compounds that showed no activity.
2. For all inactive compounds, with a ratio activity curve class of 4, PUBCHEM_ACTIVITY_SCORE is 0. For all active compounds, a score range was given for each curve class type given above. Active compounds have PUBCHEM_ACTIVITY_SCORE between 40 and 100. For a ratio activity curve class = -1.1, score = 80+abs((log_ac50+4.5)*inf_activity/20). For ratio.curve_class == -1.2 && abs(ratio.max_response) > 6*10, score = 60+abs((log_ac50+4.5)*inf_activity/20). For ratio.curve_class == -2.1 || ( ratio.curve_class==-2.2 && abs(ratio.max_response) > 6*10), score = 40+abs((log_ac50+4.5)*inf_activity/20). For ratio.curve_class == -1.2 || ratio.curve_class == -2.2, score = 20+abs((log_ac50+4.5)*inf_activity/20). Inconclusive compounds, with a donor curve class other than 4, have PUBCHEM_ACTIVITY_SCORE of 10. Inconclusive compounds have PUBCHEM_ACTIVITY_SCORE between 1 and 39.

Reference:
1. Inglese J, Auld DS, Jadhav A, et al. Quantitative high-throughput screening: a titration-based approach that efficiently identifies biological activities in large chemical libraries. Proc Natl Acad Sci U S A. 2006;103(31):11473-11478.
PhenotypePotencyEfficacyAnalysis CommentActivity_ScoreCurve_DescriptionFit_LogAC50Fit_HillSlopeFit_R2Fit_InfiniteActivityFit_ZeroActivityFit_CurveClassExcluded_PointsMax_ResponseActivity at 0.0000295000 uMActivity at 0.0000702000 uMActivity at 0.0001470000 uMActivity at 0.0002789751 uMActivity at 0.0006536651 uMActivity at 0.0007370000 uMActivity at 0.00154 uMActivity at 0.00298 uMActivity at 0.00686 uMActivity at 0.015 uMActivity at 0.022 uMActivity at 0.039 uMActivity at 0.068 uMActivity at 0.151 uMActivity at 0.366 uMActivity at 0.587 uMActivity at 0.891 uMActivity at 1.774 uMActivity at 3.811 uMActivity at 9.172 uMActivity at 15.43 uMActivity at 20.05 uMActivity at 46.10 uMActivity at 92.75 uMActivity at 177.8 uMActivity at 231.0 uMCompound QC
Inactive040 0 0 0 0 0 1-17.8666-16.6983-4.0433-7.1475-7.08646.3047.1197-17.8666QC'd by Selleck
Inactive0004-0.0872-9.96351.1785-5.6948-8.73392.9724-5.4957-0.0872QC'd by Selleck
Inactive040 0 0 0 0 0 1-11.8013-1.5898-12.6903-12.0909-6.0163-12.169113.1461-11.8013QC'd by Selleck
Inactive040 0 0 0 0 0 1-14.1486-11.3152-11.0371-17.6656-8.4388-4.933-7.662-14.1486QC'd by Selleck
Inactive000412.27282.9067-10.340712.980918.8696-1.1964-5.096712.2728QC'd by ChemieTek
Inactive0004-6.9902-4.1489-7.28232.6972-2.083-6.5944-9.687-6.9902QC'd by Selleck
Inactive040 0 0 0 0 0 00.7103-1.7201-6.1276-7.67-17.740.87462.04870.7103QC'd by Selleck
Inactive040 0 0 0 0 0 0-2.2196-1.5879-8.2795-26.4923-27.2104-27.608613.6971-2.2196QC'd by Selleck
Inactive040 0 0 0 0 0 1-2.42251.7282-4.2329-5.9085-7.3438-0.6102-10.1014-2.4225QC'd by Selleck
Inactive0004-21.7999-5.1612-2.40741.096-6.0371-21.14261.2238-21.7999QC'd by Selleck
Inactive040 0 0 0 0 0 1-16.8337-14.24672.1541-14.8238-2.2367-1.49862.0921-16.8337QC'd by Selleck
Inactive040 0 0 0 0 0 020.791714.8768-3.37942.4336-2.0454.1018-5.32420.7917QC'd by ChemieTek
Inactive040 0 0 0 0 0 016.1889-0.2447-16.55624.4892-8.4589-0.54141.714116.1889QC'd by MedChem Express
Inactive040 0 0 0 0 0 0-11.14731.30940.9663.95620.9787-7.3794-1.9302-11.1473QC'd by ChemieTek
Inactive0004-0.10761.440.354220.8954-3.36629.8023-0.2806-0.1076QC'd by Selleck
Inactive040 0 0 0 0 0 03.3009-10.4313.59180.0156-4.22023.7114-8.01273.3009QC'd by ChemieTek
Inactive040 0 0 0 0 0 0-29.2403-16.5987-0.36894.9054-2.30782.0084-18.4915-29.2403QC'd by MedChem Express
Inactive00041.3528-22.4199-8.46713.8928-10.0897-13.2912-11.69551.3528QC'd by MedChem Express
Inactive040 0 0 0 0 0 0-15.11142.2664-2.137-3.4411-14.7927-5.5477-10.7363-15.1114QC'd by ChemieTek
Inactive00040.93984.5384-0.1363-14.4886-0.93084.3154-1.33490.9398QC'd by MedChem Express
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:NCGC 靶标:N/A
External ID: TRND-SARS-CoV-2-cytotox-48hr
Protocol: PROTOCOL TABLE
SEQUENCE No. (e.g., 1, 2, 3, etc.); PARAMETER (e.g., Cells, Incubation, Reagent, etc.); VALUE and DESCRIPTION.
1. Cells. Seed 1500 HEK293-ACE2 cells (Expi293F with stable expression of human ACE2) in 2 uL/well media (DMEM, 10% FBS, 1x L-glutamine, 1x Pen/Strep, 1 ug/ml puromycin) in white 1536-well assay plates (Greiner #782073).
2. Incubation. Incubate at 37 C with 5% CO2 overnight (~16 h).
3. Compounds. Dispense 23 nL/well compounds in DMSO via pin transfer.
4. Incubation. Incubate for 1 h at 37C 5% CO2.
5. Reagent. Dispense 2 uL/well of media (DMEM, 10% FBS, 1x L-glutamine, 1x Pen/Strep, 1 ug/ml puromycin).
6. Incubation. Incubate at for 48h at 37C 5% CO2
7. Reagent. Dispense 4 uL/well of ATPLite 1step luminescence assay reagent (PerkinElmer #6016739).
8. Incubation. Incubate for 15 min at room temperature.
9. Detection. Read luminescence signal (Viewlux plate reader, PerkinElmer). Data was normalized with wells containing cells as 100%, and wells without cells (media only control) as 0%.
Comment: Disclaimer:
Although all reasonable efforts have been made to ensure the accuracy and reliability of the data, caution should be exercised when interpreting the results as artifacts are possible from nonspecific effects such as assay signal interference. The curve fitting and activity calls presented here are based on the NCATS analysis methods.

Compound Ranking:
1. Compounds are first classified as having full titration curves, partial modulation, partial curve (weaker actives), single point activity (at highest concentration only), or inactive. For this assay, apparent cytotoxic compounds are ranked higher than compounds that showed no activity.
2. For all inactive compounds, with a ratio activity curve class of 4, PUBCHEM_ACTIVITY_SCORE is 0. For all active compounds, a score range was given for each curve class type given above. Active compounds have PUBCHEM_ACTIVITY_SCORE between 40 and 100. For a ratio activity curve class = -1.1, score = 80+abs((log_ac50+4.5)*inf_activity/20). For ratio.curve_class == -1.2 && abs(ratio.max_response) > 6*10, score = 60+abs((log_ac50+4.5)*inf_activity/20). For ratio.curve_class == -2.1 || ( ratio.curve_class==-2.2 && abs(ratio.max_response) > 6*10), score = 40+abs((log_ac50+4.5)*inf_activity/20). For ratio.curve_class == -1.2 || ratio.curve_class == -2.2, score = 20+abs((log_ac50+4.5)*inf_activity/20). Inconclusive compounds, with a donor curve class other than 4, have PUBCHEM_ACTIVITY_SCORE of 10. Inconclusive compounds have PUBCHEM_ACTIVITY_SCORE between 1 and 39.
PhenotypePotencyEfficacyAnalysis CommentActivity_ScoreCurve_DescriptionFit_LogAC50Fit_HillSlopeFit_R2Fit_InfiniteActivityFit_ZeroActivityFit_CurveClassExcluded_PointsMax_ResponseActivity at 0.00457 uMActivity at 0.00705 uMActivity at 0.023 uMActivity at 0.046 uMActivity at 0.070 uMActivity at 0.104 uMActivity at 0.147 uMActivity at 0.228 uMActivity at 0.454 uMActivity at 0.702 uMActivity at 0.990 uMActivity at 1.179 uMActivity at 2.205 uMActivity at 3.547 uMActivity at 5.245 uMActivity at 6.528 uMActivity at 11.35 uMActivity at 18.98 uMActivity at 27.12 uMActivity at 37.89 uMActivity at 57.10 uMActivity at 85.70 uMActivity at 114.4 uMActivity at 171.0 uMCompound QC
Cytotoxic2.511989.96385Complete curve; high efficacy-5.62.40640.9988-81.9638-1.10 0 0 0-81.02564.3424-26.1944-82.8623-81.0256QC'd by MedChem Express
Cytotoxic3.162394.537785Complete curve; high efficacy-5.54.50450.9999-94.32250.2153-1.10 0 0 0-94.7013-0.2373-13.1526-93.6408-94.7013QC'd by SIGMA
Cytotoxic2.818494.81785Complete curve; high efficacy-5.552.04790.9999-95.8221-1.005-1.10 0 0 0-95.0616-6.2542-35.3146-94.5292-95.0616QC'd by APExBIO
Cytotoxic2.818490.520785Complete curve; high efficacy-5.553.06540.9989-88.52072-1.10 0 0 0-86.88350-24.056-89.9601-86.8835QC'd by MedChem Express
Cytotoxic5.623496.974284Complete curve; high efficacy-5.254.0951-95.47421.5-1.10 0 0 0-95.85761.65590-94.7507-95.8576QC'd by SynKinase
Cytotoxic3.981196.100684Complete curve; high efficacy-5.44.50451-95.10061-1.10 0 0 0-94.91080.5692-4.2795-94.8159-94.9108QC'd by Tocris
Cytotoxic2.511977.656384Complete curve; high efficacy-5.62.04790.9997-80.7421-3.0858-1.10 0 0 0-80.0369-5.0715-39.0219-77.613-80.0369QC'd by Microsource
Cytotoxic7.943399.498683Complete curve; high efficacy-5.14.95490.9997-96.99862.5-1.10 0 0 0-96.8051.23063.5418-95.9316-96.805QC'd by MedChem Express
Cytotoxic7.079597.835883Complete curve; high efficacy-5.154.95490.9993-95.83582-1.10 0 0 0-95.644503.4249-95.1788-95.6445QC'd by Tocris
Cytotoxic7.079597.375183Complete curve; high efficacy-5.154.0951-97.37510-1.10 0 0 0-97.18070-0.6843-95.5282-97.1807QC'd by MedChem Express
Cytotoxic7.0795102.439983Complete curve; high efficacy-5.151.69240.9998-100.43992-1.10 0 0 0-96.76290-9.8984-85.0051-96.7629QC'd by MedChem Express
Cytotoxic7.079596.356883Complete curve; high efficacy-5.154.95491-96.35680-1.10 0 0 0-96.164400-95.5939-96.1644QC'd by MedChem Express
Cytotoxic7.079593.612783Complete curve; high efficacy-5.154.95491-93.61270-1.10 0 0 0-93.425800-92.8807-93.4258QC'd by MedChem Express
Cytotoxic8.912597.135783Complete curve; high efficacy-5.054.95491-97.13570-1.10 0 0 0-96.941800-94.9322-96.9418QC'd by APExBIO
Cytotoxic8.9125105.03483Complete curve; high efficacy-5.051.64360.9999-100.0345-1.10 0 0 0-94.72923.0536-3.9173-76.9038-94.7292QC'd by Glixx
Cytotoxic1091.303782Complete curve; high efficacy-52.18761-85.80375.5-1.10 0 0 0-84.12124.86462.5388-67.7158-84.1212QC'd by SIGMA
Cytotoxic1098.125282Complete curve; high efficacy-52.84730.9999-97.62520.5-1.10 0 0 0-96.850400-83.9555-96.8504QC'd by Cayman
Cytotoxic11.220293.877282Complete curve; high efficacy-4.952.40640.9998-92.87721-1.10 0 0 0-91.056100-72.1776-91.0561QC'd by Selleck
Cytotoxic0.891360.234867Complete curve; partial efficacy-6.053.51170.9985-93.1767-32.9418-1.20 0 0 0-93.5509-51.1212-90.8041-91.9137-93.5509QC'd by Selleck
Cytotoxic0.794356.680267Complete curve; partial efficacy-6.13.92950.9999-91.2497-34.5695-1.20 0 0 0-91.0675-40.2642-90.3425-90.8279-91.0675QC'd by MedChem Express
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:ChEMBL 靶标:Escherichia coli
External ID: CHEMBL1244616
Protocol: N/A
Comment: Journal: Nat. Chem. Biol.
Year: 2009
Volume: 5
Issue: 4
First Page: 251
Last Page: 257
DOI: 10.1038/nchembio.153

Target ChEMBL ID: CHEMBL354
ChEMBL Target Name: Escherichia coli
ChEMBL Target Type: ORGANISM - Target is a complete organism
Relationship Type: N - Non-molecular target assigned
Confidence: Target assigned is non-molecular
Standard TypeActivity Comment
ActivityNot Active
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:ChEMBL 靶标:Escherichia coli
External ID: CHEMBL1244615
Protocol: N/A
Comment: Journal: Nat Chem Biol
Year: 2009
Volume: 5
Issue: 4
First Page: 251
Last Page: 257
DOI: 10.1038/nchembio.153

Target ChEMBL ID: CHEMBL354
ChEMBL Target Name: Escherichia coli
ChEMBL Target Type: ORGANISM - Target is a complete organism
Relationship Type: N - Non-molecular target assigned
Confidence: Target assigned is non-molecular
Standard TypeActivity Comment
ActivityNot Active
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:ChEMBL 靶标:Replicase polyprotein 1ab
External ID: CHEMBL4495582
Protocol: N/A
Comment: Target ChEMBL ID: CHEMBL4523582
ChEMBL Target Name: Replicase polyprotein 1ab
ChEMBL Target Type: SINGLE PROTEIN - Target is a single protein chain
Relationship Type: D - Direct protein target assigned
Confidence: Direct single protein target assigned

Data Source: SARS-CoV-2 Screening Data
Standard TypeStandard RelationStandard ValueStandard UnitsData Validity Comment
Inhibition=13.77%
Inhibition=2.35%
Inhibition=21.17%
Inhibition=18.36%
Inhibition=5.381%
Inhibition=18.17%
Inhibition=10.15%
Inhibition=29.56%
Inhibition=18.27%
Inhibition=11.42%
Inhibition=15.4%
Inhibition=7.437%
Inhibition=-3.216%
Inhibition=18%
Inhibition=1.021%
Inhibition=16.4%
Inhibition=2.544%
Inhibition=19.11%
Inhibition=26.15%
Inhibition=5.133%
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:ChEMBL 靶标:5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
External ID: CHEMBL1244614
Protocol: N/A
Comment: Journal: Nat. Chem. Biol.
Year: 2009
Volume: 5
Issue: 4
First Page: 251
Last Page: 257
DOI: 10.1038/nchembio.153

Target ChEMBL ID: CHEMBL1250374
ChEMBL Target Name: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
ChEMBL Target Type: SINGLE PROTEIN - Target is a single protein chain
Relationship Type: H - Homologous protein target assigned
Confidence: Homologous single protein target assigned
Standard TypeStandard UnitsActivity Comment
Inhibition%Active
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:NCGC 靶标:
External ID: TRND-SARS-CoV-2-PP
Protocol: PROTOCOL TABLE (format as described by Inglese J, Shamu CE and Guy RK. 2007)
SEQUENCE No. (e.g., 1, 2, 3, etc.); PARAMETER (e.g., Cells, Incubation, Reagent, etc.); VALUE and DESCRIPTION.

1. Cells. Seed 1500 HEK293-ACE2 cells (Expi293F with stable expression of human ACE2) in 2 uL/well media (DMEM, 10% FBS, 1x L-glutamine, 1x Pen/Strep, 1 ug/ml puromycin) in white 1536-well assay plates (Greiner #782073).
2. Incubation. Incubate at 37C with 5% CO2 overnight (~16 h).
3. Compounds. Dispense 23 nL/well compounds in DMSO via pin transfer.
4. Incubation. Incubate for 1 hr at 37C 5% CO2.
5. Reagent. Dispense 2 uL/well of SARS-CoV-2-S pseudotyped particles. [a] PPs are produced with murine leukemia virus pseudotyping. [b] SARS-CoV-2-S is Wuhan-Hu-1 sequence (BEI #NR-52420) with C-terminal 19 amino acid truncation.
6. Centrifuge. Spin-inoculate by centrifugation at 1500 rpm (453 xg) for 45 min at room temperature.
7. Incubation. Incubate at for 48 hr at 37C 5% CO2
8. Centrifuge. Remove supernatant with gentle centrifugation using a Blue Washer (BlueCat Bio).
9. Reagent. Dispense 4 uL/well of Bright-Glo Luciferase detection reagent (Promega #E2620).
10. Incubation. Incubate for 5 min at room temperature.
11. Detection. Read luminescence signal (Viewlux plate reader, PerkinElmer). Data was normalized with wells containing SARS-CoV-2-S PP as 100%, and wells containing bald PP (no fusion protein) as 0%.
Comment: Disclaimer:
Although all reasonable efforts have been made to ensure the accuracy and reliability of the data, caution should be exercised when interpreting the results as artifacts are possible from nonspecific effects such as assay signal interference. The curve fitting and activity calls presented here are based on the NCATS analysis methods.

Compound Ranking:
1. Compounds are first classified as having full titration curves, partial modulation, partial curve (weaker actives), single point activity (at highest concentration only), or inactive. For this assay, apparent inhibitors are ranked higher than compounds that showed apparent activation.
2. For all inactive compounds, with a ratio activity curve class of 4, PUBCHEM_ACTIVITY_SCORE is 0. For all active compounds, a score range was given for each curve class type given above. Active compounds have PUBCHEM_ACTIVITY_SCORE between 40 and 100. For a ratio activity curve class = -1.1, score = 80+abs((log_ac50+4.5)*inf_activity/20). For ratio.curve_class == -1.2 && abs(ratio.max_response) > 6*10, score = 60+abs((log_ac50+4.5)*inf_activity/20). For ratio.curve_class == -2.1 || ( ratio.curve_class==-2.2 && abs(ratio.max_response) > 6*10), score = 40+abs((log_ac50+4.5)*inf_activity/20). For ratio.curve_class == -1.2 || ratio.curve_class == -2.2, score = 20+abs((log_ac50+4.5)*inf_activity/20). Inconclusive compounds, with a donor curve class other than 4, have PUBCHEM_ACTIVITY_SCORE of 10. Inconclusive compounds have PUBCHEM_ACTIVITY_SCORE between 1 and 39.
PhenotypePotencyEfficacyAnalysis CommentActivity_ScoreCurve_DescriptionFit_LogAC50Fit_HillSlopeFit_R2Fit_InfiniteActivityFit_ZeroActivityFit_CurveClassExcluded_PointsMax_ResponseActivity at 0.00457 uMActivity at 0.00705 uMActivity at 0.023 uMActivity at 0.046 uMActivity at 0.070 uMActivity at 0.104 uMActivity at 0.147 uMActivity at 0.228 uMActivity at 0.454 uMActivity at 0.702 uMActivity at 0.990 uMActivity at 1.179 uMActivity at 2.205 uMActivity at 3.547 uMActivity at 5.245 uMActivity at 6.528 uMActivity at 11.35 uMActivity at 18.98 uMActivity at 27.12 uMActivity at 37.89 uMActivity at 57.10 uMActivity at 85.70 uMActivity at 114.4 uMActivity at 171.0 uMCompound QC
Inhibitor0.707934.828810Complete curve; partial efficacy; poor fit-6.154.95490.7525-34.81130.0174-1.40 0 0 0-43.6793-3.7355-37.8905-22.6342-43.6793QC'd by MedChem Express
Inhibitor35.481336.764810Single point of activity-4.452.40640.8748-40.7648-4-30 0 0 0-31.8873-11.45960-6.0521-31.8873QC'd by Pharmaron
Inhibitor39.810740.392710Single point of activity-4.44.44950.7948-48.5731-8.1804-30 0 0 0-41.7275-5.1127-20.8986-3.4837-41.7275QC'd by FLUKA
Inhibitor39.810736.302110Single point of activity-4.44.44950.9302-39.3021-3-30 0 0 0-33.1684-8.76590-0.1246-33.1684QC'd by Prestwick
Inhibitor1091.825410Partial curve; high efficacy; poor fit-53.92951-91.32540.5-2.31 0 0 0-91.1431-30.0380-57.0259-91.1431QC'd by APExBIO
Inhibitor39.810788.872610Single point of activity-4.44.95490.9981-87.87261-30 0 0 0-75.3105003.3645-75.3105QC'd by Microsource
Inhibitor39.810739.07410Single point of activity-4.44.95490.9982-38.5740.5-30 0 0 0-32.9783001.4313-32.9783QC'd by Carbosynth
Inhibitor17.782845.659310Partial curve; partial efficacy; poor fit-4.751.96730.9887-54.3257-8.6664-2.40 0 0 0-50.2467-11.0836-6.8054-21.6158-50.2467QC'd by TargetMol
Inhibitor39.810774.978610Single point of activity-4.44.44950.9815-77.9786-3-30 0 0 0-65.3989-8.931700-65.3989QC'd by MedChem Express
Inhibitor39.810735.78810Single point of activity-4.44.44950.945-39.8408-4.0529-30 0 0 0-34.034-8.1712-5.8755-0.0441-34.034QC'd by Adooq
Inhibitor19.952698.547510Partial curve; high efficacy; poor fit-4.71.96730.9936-101.5475-3-2.30 0 0 0-90.5058-6.67020-28.4282-90.5058QC'd by MedChem Express
Inhibitor39.810794.209610Partial curve; high efficacy; poor fit-4.44.44950.9731-106.3898-12.1802-2.30 0 0 0-90.4675-6.8168-21.693-10.2877-90.4675QC'd by Axon Medchem
Inhibitor39.810768.339410Single point of activity-4.44.95490.8933-61.33947-30 0 0 0-51.53290021.3412-51.5329QC'd by MedChem Express
Inhibitor11.220245.057510Partial curve; partial efficacy; poor fit-4.951.85790.9996-42.55752.5-2.41 0 0 0-40.794-21.67980-20.0057-40.794QC'd by MedChem Express
Inhibitor22.3872113.332310Partial curve; high efficacy; poor fit-4.651.69241-111.33232-2.31 0 0 0-91.8583-33.87930-25.3979-91.8583QC'd by Microsource
Inhibitor7.079544.4210Single point of activity-5.154.95490.6152-48.42-4-30 0 0 0-44.8333-14.7954-20.3760-44.8333QC'd by SIGMA
Inhibitor39.810732.918510Single point of activity-4.44.95490.6127-36.9185-4-30 0 0 0-32.01542.7163-20.08280-32.0154QC'd by Selleck
Inhibitor39.810751.184410Single point of activity-4.44.44951-51.18440-30 0 0 0-42.6537000-42.6537QC'd by MedChem Express
Inhibitor1058.179910Partial curve; partial efficacy; poor fit-53.51170.9887-59.1799-1-2.40 0 0 0-59.8069-4.87472.0564-35.7833-59.8069QC'd by DC Chemicals
Inhibitor39.810740.290110Single point of activity-4.44.44950.7334-45.6865-5.3964-30 0 0 0-38.9054-16.4277-13.0282-1.1636-38.9054QC'd by Adooq
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:BindingDB 靶标:N/A
External ID: BindingDB_2567_2
Protocol: N/A
Comment: Compounds with any of Ki, IC50, Kd, or EC50 activity value <= 10uM are labeled as "Active".
If multiple measurements are available for a given compound, it is labeled as "Active" if any of the measurements meet the criterion. Activity values are checked in the order of Ki, IC50, Kd, and EC50. The first entry that meets the above activity threshold is used to determine "Standard Type", "Standard Relation", and "PubChem Standard Value". Otherwise, the first non-empty entry will be used to set those values.
Standard TypePubChem Standard ValueKiTarget Accession(s)LigandTarget
Ki0.02424BDBM22113Adenosylhomocysteine nucleosidase
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:ChEMBL 靶标:5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
External ID: CHEMBL1244633
Protocol: N/A
Comment: Compounds with activity <= 10uM or explicitly reported as active by ChEMBL are flagged as active in this PubChem assay presentation.

Journal: Nat. Chem. Biol.
Year: 2009
Volume: 5
Issue: 4
First Page: 251
Last Page: 257
DOI: 10.1038/nchembio.153

Target ChEMBL ID: CHEMBL1250374
ChEMBL Target Name: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
ChEMBL Target Type: SINGLE PROTEIN - Target is a single protein chain
Relationship Type: H - Homologous protein target assigned
Confidence: Homologous single protein target assigned
PubChem Standard ValueStandard TypeStandard RelationStandard ValueStandard Units
7.0E-5Kd=0.07nM
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:NCGC 靶标:
External ID: GPx1-biochemical-p4-p7
Protocol: PROTOCOL TABLE
SEQUENCE No. (e.g., 1, 2, 3, etc.); PARAMETER (e.g., Cells, Incubation, Reagent, etc.); VALUE; DESCRIPTION.
1; Reagent 1; 3 uL; GPx1 enzyme or no enzyme control in 1536-well, black, solid Greiner assay plate.
2; Compound; 25 nL; Kalypsis pin tool (Wako USA) equipped with a 1536-well pin head.
3; Incubation; 30 min; room temperature.
4; Reagent 2; 1 uL; 10 nM GPX1, 1 mM GSH, 0.5 mM CHP, 0.5 mM NADPH, 100 nM GR, 0.01% BSA substrate
5; Detection; Fluorescence; ViewLux microplate reader, excitation 340 nm and emission 450 nm.
6; Incubation; 15 min; room temperature.
7; Detection; Fluorescence; ViewLux microplate reader, excitation 340 nm and emission 450 nm.

NOTES (numbers refer to Sequence numbers above)
1. 3 uL of 16.66 nM GPX1 and 0.016% BSA in assay buffer (50 mM Tris-HCl, 2 mM EDTA (pH 7.5), 150 mM NaCl) was added to columns 3-48 of 1536-well assay plates using a BioRAPTR Flying Reagent Dispenser (Let's Go Robotics (LGR), Carlsbad, CA). A no-enzyme control (0.01% BSA in TES assay buffer) was added to columns 1-2.
2. 25 nL of test compounds and DMSO controls were added to each well with a pin tool (Kalypsys).
3. The assay plates were incubated for 30 minutes at room temperature.
4. 1 uL of master mix (500 nM glutathione reductase (GR), 5 mM reduced glutathione (GSH), 2.5 mM NADPH in assay buffer) was added. 1 uL of cumene hydroperoxide (CHP) ([2.5 mM] in 50% EtOH) was then added within 5 minutes to initiate the reaction. Final concentrations were: 10 nM GPX1, 1 mM GSH, 0.5 mM CHP, 0.5 mM NADPH, 100 nM GR, 0.01% BSA.
5. Initial fluorescence readout (t=0) at 340/450 nm was measured using a ViewLux multimodal detector (PerkinElmer, Waltham, MA).
7. Endpoint fluorescence readout (t=15) at 340/450 nm was measured 15 min after room temperature incubation.
Comment: Disclaimer:
Although all reasonable efforts have been made to ensure the accuracy and reliability of the data, caution should be exercised when interpreting the results as artifacts are possible from nonspecific effects such as assay signal interference. The curve fitting and activity calls presented here are based on the NCATS analysis methods.

Compound Ranking:
1. Compounds are first classified as having full titration curves, partial modulation, partial curve (weaker actives), single point activity (at highest concentration only), or inactive. For this assay, apparent inhibitors are ranked higher than compounds that showed apparent activation.
2. For all inactive compounds, with a ratio activity curve class of 4, PUBCHEM_ACTIVITY_SCORE is 0. For all active compounds, a score range was given for each curve class type given above. Active compounds have PUBCHEM_ACTIVITY_SCORE between 40 and 100. For a ratio activity curve class = -1.1, score = 80+abs((log_ac50+4.5)*inf_activity/20). For ratio.curve_class == -1.2 && abs(ratio.max_response) > 6*10, score = 60+abs((log_ac50+4.5)*inf_activity/20). For ratio.curve_class == -2.1 || ( ratio.curve_class==-2.2 && abs(ratio.max_response) > 6*10), score = 40+abs((log_ac50+4.5)*inf_activity/20). For ratio.curve_class == -1.2 || ratio.curve_class == -2.2, score = 20+abs((log_ac50+4.5)*inf_activity/20). Inconclusive compounds, with a donor curve class other than 4, have PUBCHEM_ACTIVITY_SCORE of 10. Inconclusive compounds have PUBCHEM_ACTIVITY_SCORE between 1 and 39.
PhenotypePotencyEfficacyAnalysis CommentActivity_ScoreCurve_DescriptionFit_LogAC50Fit_HillSlopeFit_R2Fit_InfiniteActivityFit_ZeroActivityFit_CurveClassExcluded_PointsMax_ResponseActivity at 0.0000080000 uMActivity at 0.0000294000 uMActivity at 0.0000322389 uMActivity at 0.0000640000 uMActivity at 0.0001602685 uMActivity at 0.0003305803 uMActivity at 0.0007029698 uMActivity at 0.00145 uMActivity at 0.00305 uMActivity at 0.00484 uMActivity at 0.00883 uMActivity at 0.016 uMActivity at 0.036 uMActivity at 0.076 uMActivity at 0.127 uMActivity at 0.227 uMActivity at 0.400 uMActivity at 1.089 uMActivity at 1.958 uMActivity at 4.491 uMActivity at 9.517 uMActivity at 15.29 uMActivity at 27.66 uMActivity at 48.83 uMActivity at 98.28 uMActivity at 150.0 uMCompound QC
Inhibitor1.153584.01186Complete curve; high efficacy-5.9382.95230.9935-85.511-1.5-1.10 0 0 0 0 0 1000.55170-10.1942-66.3862-86.37470QC'd by MedChem Express
Inhibitor4.0381107.130985Complete curve; high efficacy-5.39381.10.9833-107.6309-0.5-1.10 0 0 0 0 0 0-99.10763.0643-3.35612.7295-17.6643-28.702-81.8703-99.1076QC'd by Prestwick
Inhibitor4.5309100.661985Complete curve; high efficacy-5.34381.46410.9928-111.2365-10.5746-1.10 0 0 0 0 0 0-102.4277-6.7289-14.1368-11.7774-11.5064-34.358-88.9997-102.4277QC'd by Glixx
Inhibitor3.207694.995685Complete curve; high efficacy-5.49381.69240.997-110.0264-15.0308-1.10 0 0 0 0 0 0-108.5073-10.859-15.7072-17.8113-19.7979-44.1871-99.3353-108.5073QC'd by MedChem Express
Inhibitor3.207694.333585Complete curve; high efficacy-5.49381.55790.9917-98.6297-4.2962-1.10 0 0 0 0 0 0-97.268-10.9671-0.2469-8.8219-8.6028-35.074-85.0291-97.268QC'd by Vitas
Inhibitor4.0381101.224485Complete curve; high efficacy-5.39382.24810.9999-101.22440-1.10 0 0 0 0 0 0-101.0224000.6663-1.57-17.0563-89.6716-101.0224QC'd by DC Chemicals
Inhibitor4.5309102.529384Complete curve; high efficacy-5.34381.88510.9958-104.0293-1.5-1.10 0 0 0 0 0 0-100.803500-6.96670.0183-19.6985-87.3271-100.8035QC'd by MedChem Express
Inhibitor5.152590.153784Complete curve; high efficacy-5.2881.96730.9895-98.5024-8.3487-1.10 0 0 0 0 0 0-96.571-12.4368-8.9031-14.8602-3.6239-19.2852-77.5914-96.571QC'd by EMD Chemicals
Inhibitor6.496.476183Complete curve; high efficacy-5.19383.92950.9988-94.97611.5-1.10 0 0 0 0 0 0-95.357503.3535002.0026-79.8012-95.3575QC'd by Microsource
Inhibitor6.489.09983Complete curve; high efficacy-5.19384.44950.9997-88.5990.5-1.10 0 0 0 0 0 0-88.422200.5042.224300-77.8921-88.4222QC'd by SigmaAldrich
Inhibitor4.0928572.588765Partial curve; high efficacy-5.3882.90231-572.58870-2.10 0 0 0 0 0 100000-52.3008-521.48330QC'd by Microsource
Inhibitor2.547977.642365Complete curve; partial efficacy-5.59384.50450.9919-92.3162-14.6738-1.20 0 0 0 0 0 0-90.5524-12.7147-12.5699-11.8115-21.2763-34.6101-93.8172-90.5524QC'd by SIGMA
Inhibitor2.023979.203365Complete curve; partial efficacy-5.69381.1110.9975-92.0986-12.8952-1.20 0 0 0 0 0 0-89.2428-13.3008-14.4831-11.996-25.7417-51.5286-82.1843-89.2428QC'd by SIGMA
Inhibitor2.547939.753164Complete curve; partial efficacy-5.59384.50450.9617-72.8813-33.1282-1.20 0 0 0 0 0 0-68.5285-37.2443-35.4912-31.4131-28.8568-43.7703-77.3346-68.5285QC'd by Microsource
Inhibitor5.7812259.6350Partial curve; high efficacy-5.2381.69240.9999-259.630-2.10 0 0 0 0 0 0-250.1252000-1.0316-34.0768-179.1962-250.1252QC'd by Adooq
Inhibitor4.0928222.462650Partial curve; high efficacy-5.3882.58840.9995-221.46261-2.10 0 0 0 0 0 100003.8047-24.8352-196.33210QC'd by Glixx
Inhibitor18.0377742.537649Partial curve; high efficacy-4.74382.72021-741.53761-2.10 0 0 0 0 0 0-698.2464003.833500-124.2034-698.2464QC'd by Vitas
Inhibitor16.0761622.503649Partial curve; high efficacy-4.79382.25261-622.50360-2.10 0 0 0 0 0 0-576.39220000-5.8017-157.3588-576.3922QC'd by Glixx
Inhibitor16.0761415.830746Partial curve; high efficacy-4.79382.25260.9995-418.3307-2.5-2.10 0 0 0 0 0 0-387.3433-6.004500-3.7575-3.0222-113.565-387.3433QC'd by SIGMA
Inhibitor16.2936426.190146Partial curve; high efficacy-4.7882.72020.9998-425.69010.5-2.10 0 0 0 0 0 0-400.838100003.5739-74.4409-400.8381QC'd by MedChem Express
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:15316 靶标:N/A
External ID: s-dipg-DIPG17_CTG48h_mipe5_0-1
Protocol: JHH-DIPG-1, SU-DIPG-IV, SU-DIPG-VI, SU-DIPG-XIII, SU-DIPG-XVII and SU-DIPG-XXV were seeded into 1536 well white polystyrene tissue culture treated Corning plates using a MultiDrop Combi dispenser (ThermoFisher Scientific) and small cassette in 5 microL their normal growth media. Growth media was composed of 50% Neurobasal A, 50% DMEM/F12, as well as HEPES, sodium pyruvate, non-essential amino acids, GlutaMAX-I and antibiotic-antimycotic, B27 supplement without Vitamin A, human EGF, human FGF basic, human PDGF-AA and PDGF-BB, and heparin. Each cell line was plated at varying cell densities to allow cells to be in log growth phase at the time of compound addition. 23nL of MIPE 4.0 or MIPE 5.0 compounds as well as controls were added using a pintool dispenser. Controls used were DMSO only (positive control), 9.2uM Bortezomib and empty wells (negative controls). Compound addition occurred 4 hours after cell plating for SU-DIPG-IV, SU-DIPG-VI, SU-DIPG-XIII, SU-DIPG-XIII, SU-DIPG-XVII and SU-DIPG-XXV and 24 hours after cell plating for JHH-DIPG-1. Plates were then incubated for 48 hours at 37 degrees C/95% relative humidity/5% CO2, covered by a stainless steel gasketed lid to prevent evaporation. 3 microL of Cell Titer Glo (Promega) or CellTiter-Fluor (Promega) was added to each well using a solenoid valve dispenser then plates were incubated at room temperature for 15 minutes with a stainless steel lid in place. Luminescence readings were taken using a Viewlux (PerkinElmer) with a 2 second exposure time per plate. Relative luminscense units were used to calculate compound dose response curves which were normalized to DMSO and empty well controls on each plate for 100% cell viability and 0% cell viability, respectively.
Comment: Compound Ranking:

1. Compounds are first classified as having full titration curves, partial modulation, partial curve (weaker actives), single point activity (at highest concentration only), or inactive. See data field "Curve Description". For this assay, apparent inhibitors are ranked higher than compounds that showed apparent activation.

2. For all inactive compounds, PUBCHEM_ACTIVITY_SCORE is 0. For all active compounds, a score range was given for each curve class type given above. Active compounds have PUBCHEM_ACTIVITY_SCORE between 40 and 100. Inconclusive compounds have PUBCHEM_ACTIVITY_SCORE between 1 and 39. Fit_LogAC50 was used for determining relative score and was scaled to each curve class' score range.

3. Detailed PUBCHEM_ACTIVITY_SCORE calculation formula:
a. 80 + abs((LogAC50 + 4.5)*(100-Inf_activity) / 20), if curve class = -1.1
b. 60 + abs((LogAC50 + 4.5)*(100-Inf_activity) / 20), if curve class = -1.2 and abs(max response) < 40
c. 40 + abs((LogAC50 + 4.5)*(100-Inf_activity) / 20), if curve class = -2.1 or [curve class = -2.2 and abs(max response)] < 40
d. 20 + abs((LogAC50 + 4.5)*(100-Inf_activity) / 20), if curve class = (-1.2 or -2.2) and abs(max response) >= 40
e. 20, if curve class = -1.3, -1.4, -2.3, -2.4, -3
f. 10, if curve class > 0 but not fit the above categories
g. 0, if curve class = 4
PhenotypePotencyEfficacyAnalysis_CommentActivity_ScoreCurve_DescriptionFit_LogAC50Fit_HillSlopeFit_R2Fit_InfiniteActivityFit_ZeroActivityFit_CurveClassExcluded_PointsMax_ResponseActivity at Concentration_0 %Activity at Concentration_1 %Activity at Concentration_2 %Activity at Concentration_3 %Activity at Concentration_4 %Activity at Concentration_5 %Activity at Concentration_6 %Activity at Concentration_7 %Activity at Concentration_8 %Activity at Concentration_9 %Activity at Concentration_10 %Concentration_0 uMConcentration_1 uMConcentration_2 uMConcentration_3 uMConcentration_4 uMConcentration_5 uMConcentration_6 uMConcentration_7 uMConcentration_8 uMConcentration_9 uMConcentration_10 uMCompound_QC
Cytotoxic20.91768135.902049820Partial curve; high efficacy; poor fit-4.67948647671.46410.8863980421-16.5589936119.3430562-2.30 0 0 0 0 0 0 1 0 0 08.15047131.697788109.47171799.601696111.432731110.167865107.976429125.741198-0.73860694.96760478.1543168.150470.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by MedChem Express
Inactive0004101.253926127.324571115.767189125.696193113.041352129.390266119.240485122.258886123.363896127.713639124.999902101.2539260.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by Tocris
Inconclusive0.00166298.986263770110Complete curve; high efficacy-8.77948647674.95491731340.8750837011105.890721876.90445809991.10 0 0 0 0 0 0 0 0 0 086.6576689.19051591.350045120.000704106.60242191.354789123.49336101.116966114.944989105.541353103.4209986.6576680.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by Microsource
Inactive000481.74876391.07813297.941934109.01709884.60649982.71824193.33053982.10469690.31044179.42773370.23526281.7487630.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by Glixx
Inactive000427.47923829.80749923.75482637.55011952.46726249.63877844.97141949.44317341.19998944.19153831.10052827.4792380.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by DC Chemicals
Inactive000488.79689488.932483107.805452118.329115115.576179104.531392105.66652628.45698931.995075108.633009116.5560488.7968940.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by MedChem Express
Cytotoxic0.066148106.596811814192Complete curve; high efficacy-7.17948647672.33317337670.985606080410.6438142359117.24062605-1.10 0 0 0 0 0 0 0 0 0 07.74429111.298727110.14607116.182798126.58227165.37471417.76590913.33775810.27083913.96513910.5817377.744290.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by Cayman
Cytotoxic0.05254384.9398391692Complete curve; high efficacy-7.27948647672.33317337670.990919774114.8727788499.812618-1.10 0 0 0 0 0 0 0 0 0 011.38684192.81261899.298943107.33107389.66564550.96966518.13243517.0328714.61566517.16466715.08575911.3868410.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by Prestwick
Cytotoxic20.9176839.0274612520Single point of activity-4.67948647674.50447028490.76331321172.8772605111.90472175-30 0 0 0 0 0 0 0 0 0 074.960448107.67487399.350847115.643094110.012967111.330367117.512906105.286877120.363473118.025882104.43137874.9604480.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by MedChem Express
Inactive000496.125208106.000805107.980951136.360291123.114488114.464932105.828212124.785229105.721751109.721799110.00911796.1252080.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by Selleck
Inactive0004110.838301118.188736108.142055118.143856124.683861119.252339115.550272104.14051999.571981102.206837100.779485110.8383010.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by MedChem Express
Cytotoxic0.02633455.4321562520Complete curve; partial efficacy-7.57948647674.44947028490.948890695449.9672315105.39938775-1.20 0 0 0 0 0 1 0 0 0 046.22035798.50087799.546935118.25014290.96300349.96184550.4874337.9043458.57822748.29300946.64693846.2203570.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by Microsource
Cytotoxic16.61550481.186630080141Partial curve; partial efficacy-4.77948647673.06544833580.931190477510.115516919991.302147-2.20 0 0 0 0 0 0 0 0 0 011.74838993.39199385.520473100.05342691.880897102.64684984.98592.11324378.14217393.00733455.22959211.7483890.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by APExBIO
Inactive0004107.882632102.005025115.270626121.618589129.745949119.314252113.120462119.925832116.630404129.198219118.287154107.8826320.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by SIGMA
Cytotoxic0.52542855.440013850120Complete curve; partial efficacy; poor fit-6.27948647670.59999999990.903396599459.8369305999115.27694445-1.40 0 0 0 0 0 0 1 0 0 065.952132113.14587111.366916108.039429121.56917196.36954588.54103195.598486-3.27222268.19014864.1906665.9521320.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by MedChem Express
Inactive0004116.426606111.728695104.661632102.908207118.66169104.411628131.616847111.339177109.683848122.089515104.570541116.4266060.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by MedChem Express
Inactive0004111.563029101.245309110.80667689.94805593.03796105.55566698.87844190.74425799.27862993.092724102.478972111.5630290.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by MedChem Express
Inactive000494.312646116.36429196.72339293.38067103.194576118.53462635.530657103.9781282.541336104.045452106.42392994.3126460.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by Microsource
Inactive0004107.998615126.055741109.890503106.947021103.860523117.062791125.189833118.83435330.45056690.927945102.053553107.9986150.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by Microsource
Inactive000492.894063116.016249111.275428116.926942115.585332107.208781122.053665115.77292995.055545109.97030596.25547692.8940630.001560.00467999999990.0140.04210.1260.3791.13999999993.4110.19999999930.792.2QC'd by Tocris
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:BindingDB 靶标:N/A
External ID: BindingDB_3581_1
Protocol: N/A
Comment: Compounds with any of Ki, IC50, Kd, or EC50 activity value <= 10uM are labeled as "Active".
If multiple measurements are available for a given compound, it is labeled as "Active" if any of the measurements meet the criterion. Activity values are checked in the order of Ki, IC50, Kd, and EC50. The first entry that meets the above activity threshold is used to determine "Standard Type", "Standard Relation", and "PubChem Standard Value". Otherwise, the first non-empty entry will be used to set those values.
Standard TypePubChem Standard ValueKdTarget Accession(s)LigandTarget
Kd7.84E-40.784B5Y1L0BDBM221135'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
Kd0.00141.4Q5HFG2BDBM221135'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
Kd2.0E-60.002P0AF12BDBM221135'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
Kd0.02424BDBM22113Adenosylhomocysteine nucleosidase
Kd8.6E-50.086Q13126BDBM22113S-methyl-5'-thioadenosine phosphorylase
Kd3.4E-50.034Q13126BDBM22113S-methyl-5'-thioadenosine phosphorylase
Kd3.6E-40.36BDBM501700935'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
Kd0.00121.2O24915BDBM50170093Aminodeoxyfutalosine nucleosidase
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:NCGC 靶标:
External ID: FGL-PARP_PEO-CTG96h-MIPE5.0-p1
Protocol: PROTOCOL TABLE (as described by Inglese J, Shamu CE and Guy RK. 2007)
SEQUENCE No. (e.g., 1, 2, 3, etc.); PARAMETER (e.g., Cells, Incubation, Reagent, etc.); VALUE; DESCRIPTION.
1; Compounds; 20nL; 1536-well white tissue culture-treated plates.
2; Cells; 5 uL; PEO1, PEO4, and PEO1/OlaR cells at 600 cells per well.
3; Incubation; 96 hr; 37C, 95% humidity, 5% CO2.
4; Reagent; 3 uL; CellTiter-Glo (Promega).
5; Incubation; 15 min; room temperature.
6; Detection; Luminescence, PHERAstar (BMG Labtech) plate reader.

NOTES (numbers refer to Sequence numbers above)
1. MIPE 5.0 compounds were acoustically dispensed by Echo Acoustic Liquid Handler (Beckman Coulter Life Sciences). Each compound was plated at an 11-point concentration range with 1:3 dilution. Bortezomib, a proteasome inhibitor (final concentration, 20 uM), was used as a positive.
2. PEO1, PEO4, and PEO1/OlaR were trypsinized and dispensed in 5 uLof growth medium using a Multidrop Combi dispenser at a density of 600 cells per well to allow compounds to be present during the exponential growth phase.
3. Plates were incubated for 96 hours at standard incubator conditions and covered by a stainless steel gasketed lid to prevent evaporation.
4. Three microliters of CellTiter-Glo (Promega) were added to each well.
5. Plates were incubated at room temperature for 15 min with a stainless-steel lid in place.
6. Luminescence readings were taken using PHERAstar (BMG Labtech). Compound dose-response curves were normalized to DMSO and empty well controls on each plate. The average Z-AUC was calculated to determine inactive and active drug responses. Drugs with average Z-AUC values less than -1.0 in PARPi-sensitive and -resistant HGSC cell lines in the MIPE 5.0 dataset were defined as hits, indicating active drugs.

REFERENCES:
Inglese J, Shamu CE and Guy RK, Reporting data from high throughput screening of small molecule libraries, Nature Chemical Biology, 2007, 3(8): 438-441. doi.org/10.1038/nchembio0807-438.
Comment: Disclaimer:
Although all reasonable efforts have been made to ensure the accuracy and reliability of the data, caution should be exercised when interpreting the results as artifacts are possible from nonspecific effects such as assay signal interference. The curve fitting and activity calls presented here are based on the NCATS analysis methods.

Compound Ranking:
1. Compounds are first classified as having full titration curves, partial modulation, partial curve (weaker actives), single point activity (at highest concentration only), or inactive. For this assay, apparent cytotoxic compounds are ranked higher than compounds that showed no activity.
2. For all inactive compounds, with a ratio activity curve class of 4, PUBCHEM_ACTIVITY_SCORE is 0. For all active compounds, a score range was given for each curve class type given above. Active compounds have PUBCHEM_ACTIVITY_SCORE between 40 and 100. For a ratio activity curve class = -1.1, score = 80+abs((log_ac50+4.5)*inf_activity/20). For ratio.curve_class == -1.2 && abs(ratio.max_response) > 6*10, score = 60+abs((log_ac50+4.5)*inf_activity/20). For ratio.curve_class == -2.1 || ( ratio.curve_class==-2.2 && abs(ratio.max_response) > 6*10), score = 40+abs((log_ac50+4.5)*inf_activity/20). For ratio.curve_class == -1.2 || ratio.curve_class == -2.2, score = 20+abs((log_ac50+4.5)*inf_activity/20). Inconclusive compounds, with a donor curve class other than 4, have PUBCHEM_ACTIVITY_SCORE of 10. Inconclusive compounds have PUBCHEM_ACTIVITY_SCORE between 1 and 39.
PEO1_ola_R-Z-AUCPEO1_ola_R-PhenotypePEO1_ola_R-PotencyPEO1_ola_R-EfficacyPEO1_ola_R-Analysis_CommentPEO1_ola_R-Activity_ScorePEO1_ola_R-Curve_DescriptionPEO1_ola_R-Fit_LogAC50PEO1_ola_R-Fit_HillSlopePEO1_ola_R-Fit_R2PEO1_ola_R-Fit_InfiniteActivityPEO1_ola_R-Fit_ZeroActivityPEO1_ola_R-Fit_CurveClassPEO1_ola_R-Excluded_PointsPEO1_ola_R-Max_ResponsePEO1_ola_R-Activity_at_00000256000_uMPEO1_ola_R-Activity_at_00001280000_uMPEO1_ola_R-Activity_at_00002560000_uMPEO1_ola_R-Activity_at_00005639010_uMPEO1_ola_R-Activity_at_000128_uMPEO1_ola_R-Activity_at_000256_uMPEO1_ola_R-Activity_at_000455_uMPEO1_ola_R-Activity_at_000645_uMPEO1_ola_R-Activity_at_0013_uMPEO1_ola_R-Activity_at_0030_uMPEO1_ola_R-Activity_at_0046_uMPEO1_ola_R-Activity_at_0064_uMPEO1_ola_R-Activity_at_0154_uMPEO1_ola_R-Activity_at_0320_uMPEO1_ola_R-Activity_at_0569_uMPEO1_ola_R-Activity_at_0806_uMPEO1_ola_R-Activity_at_1600_uMPEO1_ola_R-Activity_at_3768_uMPEO1_ola_R-Activity_at_5686_uMPEO1_ola_R-Activity_at_8010_uMPEO1_ola_R-Activity_at_1913_uMPEO1_ola_R-Activity_at_3998_uMPEO1_ola_R-Activity_at_6000_uMPEO1_ola_R-Activity_at_8000_uMPEO1-Z-AUCPEO1-PhenotypePEO1-PotencyPEO1-EfficacyPEO1-Analysis_CommentPEO1-Activity_ScorePEO1-Curve_DescriptionPEO1-Fit_LogAC50PEO1-Fit_HillSlopePEO1-Fit_R2PEO1-Fit_InfiniteActivity
-1.748486862Cytotoxic0.009875.668120Complete curve; partial efficacy; poor fit-8.01010.90.818738.0435113.7116-1.40 0 0 0 0 0 019.7418105.263860.565755.715445.869751.912137.073219.7418-2.422056816Cytotoxic0.007898.287985Complete curve; high efficacy-8.11014.0950.918128.4691
-1.396676816Cytotoxic0.038972.628526Complete curve; partial efficacy-7.41014.0950.952238.2424110.8708-1.20 0 0 0 0 0 022.0625112.9607108.454345.937544.912345.101140.259622.0625-1.682849749Cytotoxic0.017461.766327Complete curve; partial efficacy-7.76014.50450.97343.1447
-1.289810323Cytotoxic0.436460.626523Complete curve; partial efficacy-6.36011.96730.99830.57491.2005-1.20 0 0 0 0 0 032.05792.558889.489589.710969.674935.717328.975632.057-1.51409436Cytotoxic0.109652.615925Complete curve; partial efficacy-6.96014.95490.995740.1831
-2.187197393Cytotoxic0.038958.860824Complete curve; partial efficacy-7.41014.50450.985928.872287.733-1.20 0 0 0 0 0 022.695388.848386.32434.615932.441132.421827.179122.6953-2.439835072Cytotoxic0.017481.769384Complete curve; high efficacy-7.76011.11050.99124.4706
-1.688999982Cytotoxic0.017462.83926Complete curve; partial efficacy-7.76014.0950.995139.8686102.7077-1.20 0 0 0 0 0 037.08102.221989.121343.46139.844338.039840.225237.08-1.807353451Cytotoxic0.04959.590325Complete curve; partial efficacy-7.31013.1320.948536.7979
-2.151467879Cytotoxic0.245456.150122Complete curve; partial efficacy-6.61012.72020.976520.363576.5137-1.20 0 0 0 0 0 017.680969.810876.811481.738138.459524.697819.518217.6809-1.94998744Cytotoxic0.275455.365523Complete curve; partial efficacy-6.56011.62660.997826.8149
-1.688183612Cytotoxic0.173789.780482Complete curve; high efficacy-6.76013.1320.998414.8785104.6589-1.10 0 0 0 0 0 013.5532104.8594102.8313101.700527.748117.823812.854413.5532-2.097073142Cytotoxic0.154878.618822Complete curve; partial efficacy-6.81011.92820.988116.1888
-2.669259461Cytotoxic0.007869.843825Complete curve; partial efficacy-8.11012.95230.965226.156396.0001-1.20 0 0 0 0 0 019.14293.428839.376532.867922.78724.308631.539819.142-2.741406614Cytotoxic0.007870.930925Complete curve; partial efficacy-8.11011.88510.996227.4103
-1.534196135Cytotoxic0.436492.996681Complete curve; high efficacy-6.36011.86170.9867.884100.8807-1.10 0 0 0 0 0 06.9699.357193.7882108.531964.364818.08967.33566.96-2.079878452Cytotoxic0.194979.910122Complete curve; partial efficacy-6.71013.51170.991814.8119
-2.239224181Cytotoxic0.038968.363224Complete curve; partial efficacy-7.41014.50450.974124.528492.8916-1.20 0 0 0 0 0 015.551491.701493.649531.413933.303226.993622.679715.5514-3.384080322Cytotoxic0.007876.566323Complete curve; partial efficacy-8.11011.62660.974914.207
-1.37962701Cytotoxic1.2361.132822Complete curve; partial efficacy-5.91014.0950.995823.293884.4267-1.20 0 0 0 0 0 023.040985.39484.304387.713981.059938.455524.491423.0409-1.505404731Cytotoxic0.549473.557122Complete curve; partial efficacy-6.260110.989921.0413
-2.710453777Cytotoxic0.008755.94325Complete curve; partial efficacy-8.06013.29750.951327.526683.4696-1.20 0 0 0 0 0 019.494482.800239.309935.045430.205725.699526.839919.4944-3.575936609Cytotoxic0.006242.432223Complete curve; partial efficacy-8.21014.95490.994918.7974
-2.114807879Cytotoxic0.097759.348723Complete curve; partial efficacy-7.01011.62660.994424.156883.5054-1.20 0 0 0 0 0 021.319183.192880.978264.188531.396928.830823.518121.3191-1.926999729Cytotoxic0.245457.794823Complete curve; partial efficacy-6.61014.95490.976327.6953
-1.076840187Cytotoxic0.173781.070883Complete curve; high efficacy-6.76011.62660.973229.4412110.5121-1.10 0 0 0 0 0 022.857116.918299.3311102.334849.35633.699734.559922.857-1.409208042Cytotoxic0.218774.363623Complete curve; partial efficacy-6.66013.06540.985928.7815
-3.27518711Cytotoxic0.006260.873423Complete curve; partial efficacy-8.21014.0950.9918.064378.9377-1.20 0 0 0 0 0 014.574477.200321.16519.675121.485616.247818.145914.5744-3.795041707Cytotoxic0.008754.707622Complete curve; partial efficacy-8.06013.990.967111.1126
-1.568711037Cytotoxic0.245468.550623Complete curve; partial efficacy-6.61013.1320.96524.663393.2139-1.20 0 0 0 0 0 019.128792.396884.2257102.786943.729329.713827.174919.1287-1.752700398Cytotoxic0.154883.800682Complete curve; high efficacy-6.81011.28760.992620.4649
-2.44866556Cytotoxic0.007888.98285Complete curve; high efficacy-8.11014.0950.983227.0227116.0048-1.10 0 0 0 0 0 017.8697115.24237.666629.559530.791827.871829.340217.8697-3.27247136Cytotoxic0.009840.328724Complete curve; partial efficacy-8.01011.10.939222.1543
-2.134305386Cytotoxic0.00786926Complete curve; partial efficacy-8.11012.35310.943135.613104.613-1.20 0 0 0 0 0 024.089899.671252.016940.909333.676338.37341.901224.0898-2.695362826Cytotoxic0.009866.914725Complete curve; partial efficacy-8.01011.71370.985628.043
-1.841563598Cytotoxic0.039975.39624Complete curve; partial efficacy-7.39894.95490.983324.8484100.2443-1.20 0 0 0 0 0 017.4504101.518293.8381105.188931.862730.686425.456217.4504-2.172833667Cytotoxic0.008972.144425Complete curve; partial efficacy-8.04892.72020.984530.2194
Cytotoxic0.008758.47225Complete curve; partial efficacy-8.06014.0450.931327.637886.1098-1.20 0 0 0 0 0 023.387285.856838.121124.103623.44927.063540.275923.3872-2.647939347Cytotoxic0.012359.872125Complete curve; partial efficacy-7.91012.40640.974729.0347
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:ChEMBL 靶标:Severe acute respiratory syndrome coronavirus 2
External ID: CHEMBL4513082
Protocol: N/A
Comment: Target ChEMBL ID: CHEMBL4303835
ChEMBL Target Name: SARS-CoV-2
ChEMBL Target Type: ORGANISM - Target is a complete organism
Relationship Type: N - Non-molecular target assigned
Confidence: Target assigned is non-molecular

Data Source: SARS-CoV-2 Screening Data
Standard TypeStandard RelationStandard ValueStandard Units
Inhibition=0.24%
Inhibition=4.58%
Inhibition=-0.3%
Inhibition=-0.3%
Inhibition=-0.04%
Inhibition=-0.04%
Inhibition=-0.08%
Inhibition=-0.08%
Inhibition=-0.08%
Inhibition=-0.08%
Inhibition=0.03%
Inhibition=0%
Inhibition=0.03%
Inhibition=0%
Inhibition=-0.27%
Inhibition=-0.27%
Inhibition=-0.08%
Inhibition=-0.08%
Inhibition=14.41%
Inhibition=0.39%
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:15316 靶标:N/A
External ID: s-dipg-DIPG25-MIPE5.0-CTF48h-p1
Protocol: JHH-DIPG-1, SU-DIPG-IV, SU-DIPG-VI, SU-DIPG-XIII, SU-DIPG-XVII and SU-DIPG-XXV were seeded into 1536 well white polystyrene tissue culture treated Corning plates using a MultiDrop Combi dispenser (ThermoFisher Scientific) and small cassette in 5 microL their normal growth media. Growth media was composed of 50% Neurobasal A, 50% DMEM/F12, as well as HEPES, sodium pyruvate, non-essential amino acids, GlutaMAX-I and antibiotic-antimycotic, B27 supplement without Vitamin A, human EGF, human FGF basic, human PDGF-AA and PDGF-BB, and heparin. Each cell line was plated at varying cell densities to allow cells to be in log growth phase at the time of compound addition. 23nL of MIPE 4.0 or MIPE 5.0 compounds as well as controls were added using a pintool dispenser. Controls used were DMSO only (positive control), 9.2uM Bortezomib and empty wells (negative controls). Compound addition occurred 4 hours after cell plating for SU-DIPG-IV, SU-DIPG-VI, SU-DIPG-XIII, SU-DIPG-XIII, SU-DIPG-XVII and SU-DIPG-XXV and 24 hours after cell plating for JHH-DIPG-1. Plates were then incubated for 48 hours at 37 degrees C/95% relative humidity/5% CO2, covered by a stainless steel gasketed lid to prevent evaporation. 3 microL of Cell Titer Glo (Promega) or CellTiter-Fluor (Promega) was added to each well using a solenoid valve dispenser then plates were incubated at room temperature for 15 minutes with a stainless steel lid in place. Luminescence readings were taken using a Viewlux (PerkinElmer) with a 2 second exposure time per plate. Relative luminscense units were used to calculate compound dose response curves which were normalized to DMSO and empty well controls on each plate for 100% cell viability and 0% cell viability, respectively.
Comment: Compound Ranking:

1. Compounds are first classified as having full titration curves, partial modulation, partial curve (weaker actives), single point activity (at highest concentration only), or inactive. See data field "Curve Description". For this assay, apparent inhibitors are ranked higher than compounds that showed apparent activation.

2. For all inactive compounds, PUBCHEM_ACTIVITY_SCORE is 0. For all active compounds, a score range was given for each curve class type given above. Active compounds have PUBCHEM_ACTIVITY_SCORE between 40 and 100. Inconclusive compounds have PUBCHEM_ACTIVITY_SCORE between 1 and 39. Fit_LogAC50 was used for determining relative score and was scaled to each curve class' score range.

3. Detailed PUBCHEM_ACTIVITY_SCORE calculation formula:
a. 80 + abs((LogAC50 + 4.5)*(100-Inf_activity) / 20), if curve class = -1.1
b. 60 + abs((LogAC50 + 4.5)*(100-Inf_activity) / 20), if curve class = -1.2 and abs(max response) < 40
c. 40 + abs((LogAC50 + 4.5)*(100-Inf_activity) / 20), if curve class = -2.1 or [curve class = -2.2 and abs(max response)] < 40
d. 20 + abs((LogAC50 + 4.5)*(100-Inf_activity) / 20), if curve class = (-1.2 or -2.2) and abs(max response) >= 40
e. 20, if curve class = -1.3, -1.4, -2.3, -2.4, -3
f. 10, if curve class > 0 but not fit the above categories
g. 0, if curve class = 4
PhenotypePotencyEfficacyAnalysis_CommentActivity_ScoreCurve_DescriptionFit_LogAC50Fit_HillSlopeFit_R2Fit_InfiniteActivityFit_ZeroActivityFit_CurveClassExcluded_PointsMax_ResponseActivity at Concentration_0 %Activity at Concentration_1 %Activity at Concentration_2 %Activity at Concentration_3 %Activity at Concentration_4 %Activity at Concentration_5 %Activity at Concentration_6 %Activity at Concentration_7 %Activity at Concentration_8 %Activity at Concentration_9 %Activity at Concentration_10 %Concentration_0 uMConcentration_1 uMConcentration_2 uMConcentration_3 uMConcentration_4 uMConcentration_5 uMConcentration_6 uMConcentration_7 uMConcentration_8 uMConcentration_9 uMConcentration_10 uMCompound_QC
Cytotoxic37.1974891.134225849520Single point of activity-4.42948647674.95491731340.8754813724.34239383595.4766196845-30 0 0 0 0 0 0 0 0 0 024.5788339183.2227958486.1569031790.2915451995.2627434795.6515948696.5909352292.85441883100.06083793105.84713351109.655310824.578833910.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by MedChem Express
Inactive000493.8509995479.4776906282.2095653293.9775815890.8306227694.8907575990.6124441681.7687692690.8772783284.2336641690.231781893.850999540.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by Tocris
Inactive000486.134443373.9806785467.2394532182.535712882.3784866992.2175461892.8671516283.8701906785.2678502674.6500156588.9025027586.13444330.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by Microsource
Inactive000489.2364597283.037056879.6146984487.525437764.6108179969.99047086101.2026541668.8347634763.6290199353.9879306190.7541046489.236459720.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by Glixx
Cytotoxic0.02954721.64933776420Complete curve; partial efficacy; poor fit-7.52948647671.66043580990.956144609423.65204128645.30137905-1.40 0 0 0 0 0 0 0 0 0 023.4148080746.8013790541.8024858246.9465580834.9700807830.1165112523.5105230323.734849625.9491690923.0466688422.0935975823.414808070.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by DC Chemicals
Inactive000489.6985841587.8433694967.9853397780.2398821282.0383776392.2919172774.9799083685.6698328286.7713615368.1256913593.8956479589.698584150.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by MedChem Express
Cytotoxic0.14808663.39737500667Complete curve; partial efficacy-6.82948647673.92947298630.905029322836.915708489100.313083495-1.20 0 0 0 0 0 0 0 0 0 021.7904836696.5987908294.43025906103.20673263104.33173473101.4182960752.0243711150.2984012850.9629562243.5967184818.6175882321.790483660.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by Cayman
Inconclusive20.91768631.685081181810-4.67948647672.72022121430.975632818714.689592515983.00451133412.10 0 0 0 0 0 0 0 0 0 0745.0821737484.3738862666.262242283.0521194383.928434285.5330517281.2726060175.1664143591.53685189100.75315183261.07217232745.082173740.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by Prestwick
Inactive0004120.40429347117.23356076115.21849609108.2931767175.48048055106.74453062100.41237385110.86019256105.12953065111.22572436108.89664244120.404293470.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by MedChem Express
Inactive000499.91771699101.9803382991.4655009196.50193217103.61878878103.4939792495.8346262599.0631839991.64823837100.9118831100.7847463699.917716990.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by Selleck
Inactive000499.65479254107.41424051104.1960617897.022782997.64026763101.74012424103.39301871112.88722995111.7787508113.20176801101.1563111999.654792540.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by MedChem Express
Inconclusive9.34358550.737573034110Single point of activity-5.02948647674.09497298630.8148026191141.33892204490.601349009930 0 0 0 0 0 0 0 0 0 1113.1474481797.5026532177.4666256586.9613308592.79304848102.6309189488.7745299285.5235599191.8646303194.94244968135.67627001113.147448170.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by Microsource
Cytotoxic20.9176870.46000212220Partial curve; partial efficacy; poor fit-4.67948647671.210.821996705722.73230431893.19230644-2.40 0 0 1 0 0 0 0 0 0 041.2136163598.9677164594.347402372.6610390861.913478696.0860629488.6325068191.1689630186.268635682.5269403165.4099961541.213616350.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by APExBIO
Inactive000498.37191731101.022737785.596536491.76796683101.8438316897.81853288100.2541168103.9191032499.51649589104.283384895.0153391798.371917310.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by SIGMA
Cytotoxic14.80858439.40951425621Partial curve; partial efficacy-4.82948647671.80794769090.886169148860.39380578299.803320038-2.20 0 0 0 0 0 0 0 0 0 065.161012699.5075022799.61224833102.0094323698.9301253489.6273854107.20283492101.7382166399.0189098694.9230237879.1930292465.16101260.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by MedChem Express
Inactive000495.2022033595.86509309101.256044100.79084239105.65881833102.3633253493.0129541107.79376442109.54367405104.2502718996.9135610195.202203350.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by MedChem Express
Inactive0004116.11066365109.55798176104.64236051113.96538634120.25184545112.0247456885.524786793.9423410992.51697186121.10071117115.38270483116.110663650.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by MedChem Express
Inactive000483.3781147882.9072095868.5516327582.0010859187.2624376289.4087354986.4492320191.6242891185.1684473272.5023869679.5461821583.378114780.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by Microsource
Inactive000499.7994155293.6139866886.3609451791.8369255196.62300461108.81108568100.6366075695.55377397107.9940080289.9059846393.8660770499.799415520.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by Microsource
Inactive000486.9553569692.8354539498.68657693104.24344275105.493681497.0141289599.93539265101.2729295196.9503256790.9568267591.6163412886.955356960.001560.00467999999990.0140.04210.1260.3791.13999999993.4110.19999999930.792.2QC'd by Tocris
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:ChEMBL 靶标:5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
External ID: CHEMBL3607079
Protocol: N/A
Comment: Journal: Bioorg. Med. Chem.
Year: 2015
Volume: 23
Issue: 17
First Page: 5326
Last Page: 5333
DOI: 10.1016/j.bmc.2015.07.059

Target ChEMBL ID: CHEMBL1250346
ChEMBL Target Name: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
ChEMBL Target Type: SINGLE PROTEIN - Target is a single protein chain
Relationship Type: H - Homologous protein target assigned
Confidence: Homologous single protein target assigned
Standard TypeActivity Comment
ActivityActive
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:NCGC 靶标:
External ID: NSD2-synergy-p-2C
Protocol: High-throughput drug screening of isogenic RCH-ACV cell lines was performed at the National Center for Advancing Translational Science (NCATS), National Institutes of Health as previously described (1). Briefly, isogenic RCH-ACV NSD2 p.E1099K mutant (9B) and WT cells (2C) were plated at 500 cells/well in a 1536-well plate with a 72-hour incubation with compounds prior to addition of CellTiter-Glo to assess cell viability. NCATS libraries screened include: NPC, MIPE 5.0, Kinase and NPACT. To determine compound activity in the qHTS assay, the concentration-response data for each sample was plotted and modeled by a four-parameter logistic fit yielding IC50 and efficacy (maximal response) values. The area under the curve (AUC) of the dose-response curve ensures both efficacy (magnitude of cell killing) and potency (concentration that elicits cell killing) are accounted for in the analysis of activity.

Reference:
1. Tobie D Lee, Olivia W Lee, Kyle R Brimacombe, Lu Chen, Rajarshi Guha, Sabrina Lusvarghi, Bethilehem G Tebase, Carleen Klumpp-Thomas, Robert W Robey, Suresh V Ambudkar, Min Shen, Michael M Gottesman, Matthew D Hall. A High-Throughput Screen of a Library of Therapeutics Identifies Cytotoxic Substrates of P-glycoprotein. Mol Pharmacol. 2019, Nov;96(5):629-640.
Comment: Disclaimer:
Although all reasonable efforts have been made to ensure the accuracy and reliability of the data, caution should be exercised when interpreting the results as artifacts are possible from nonspecific effects such as assay signal interference. The curve fitting and activity calls presented here are based on the NCATS analysis methods.

Compound Ranking:
1. Compounds are first classified as having full titration curves, partial modulation, partial curve (weaker actives), single point activity (at highest concentration only), or inactive. For this assay, apparent inhibitors are ranked higher than compounds that showed apparent activation.
2. For all inactive compounds, with a ratio activity curve class of 4, PUBCHEM_ACTIVITY_SCORE is 0. For all active compounds, a score range was given for each curve class type given above. Active compounds have PUBCHEM_ACTIVITY_SCORE between 40 and 100. For a ratio activity curve class = -1.1, score = 80+abs((log_ac50+4.5)*inf_activity/20). For ratio.curve_class == -1.2 && abs(ratio.max_response) > 6*10, score = 60+abs((log_ac50+4.5)*inf_activity/20). For ratio.curve_class == -2.1 || ( ratio.curve_class==-2.2 && abs(ratio.max_response) > 6*10), score = 40+abs((log_ac50+4.5)*inf_activity/20). For ratio.curve_class == -1.2 || ratio.curve_class == -2.2, score = 20+abs((log_ac50+4.5)*inf_activity/20). Inconclusive compounds, with a donor curve class other than 4, have PUBCHEM_ACTIVITY_SCORE of 10. Inconclusive compounds have PUBCHEM_ACTIVITY_SCORE between 1 and 39.
PhenotypePotencyEfficacyAnalysis CommentActivity_ScoreCurve_DescriptionFit_LogAC50Fit_HillSlopeFit_R2Fit_InfiniteActivityFit_ZeroActivityFit_CurveClassExcluded_PointsMax_ResponseActivity at 0.0000062633 uMActivity at 0.0000234000 uMActivity at 0.0000299492 uMActivity at 0.0000680174 uMActivity at 0.0001469594 uMActivity at 0.0003236290 uMActivity at 0.0006759500 uMActivity at 0.00129 uMActivity at 0.00271 uMActivity at 0.00485 uMActivity at 0.00758 uMActivity at 0.016 uMActivity at 0.038 uMActivity at 0.071 uMActivity at 0.177 uMActivity at 0.355 uMActivity at 0.588 uMActivity at 1.399 uMActivity at 1.898 uMActivity at 4.965 uMActivity at 9.229 uMActivity at 17.27 uMActivity at 44.90 uMActivity at 91.89 uMActivity at 155.1 uMActivity at 231.0 uMCompound QC
Inactive00049.3597000002.228909.3597QC'd by Microsource
Inactive0-4.4754.95490.8748-21.4867440 0 0 0 0 0 0 0-17.07226.10422.829307.402506.12865.2151-17.0722QC'd by Vitas
Inactive0-8.2751.17050.66112-6.66740 0 0 0 0 0 0 0-1.0776-6.3892-2.9698-1.73725.8740.35322.4192.3477-1.0776QC'd by Labotest
Inactive0-4.4254.95490.4933-23.5282-340 0 0 0 0 0 0 0-17.94020.3948-8.1012-10.4184-5.55441.8102-4.77655.7051-17.9402QC'd by Vitas
Inactive000407.8331009.349608.39368.85740QC'd by Sequoia
Inactive000402.13462.08732.87872.198101.071700QC'd by SIGMA
Inactive000406.747707.7196.37060000QC'd by Prestwick
Inactive00041.32598.1273007.30856.14859.763401.3259QC'd by Enzo
Inactive0-6.7754.95490.7871-25.4234-14.789241 0 0 0 0 0 0 1-14.8266-40.4001-18.8558-14.3881-11.9076-28.2695-23.675-23.6904-14.8266QC'd by Microsource
Inactive00040003.22385.382307.503400QC'd by Microsource
Inactive0-4.4754.95490.4377-10.0741240 0 0 0 0 0 0 0-7.9784006.8904-2.128300.76149.8865-7.9784QC'd by Labotest
Inactive0004-2.11844.73944.4107-0.61385.167402.3218-1.3941-2.1184QC'd by Microsource
Inactive000400.23422.97255.131802.023500.05890QC'd by Enzo
Inactive0-8.7250.60.79454.5-11.988640 0 0 0 0 0 0 1-9.0185-8.3238-0.45670.90310.07213.33947.72623.0826-9.0185QC'd by Vitas
Inactive0-9.1254.95490.55695-5.355240 0 0 0 0 0 0 1-2.6103-2.7966.99953.42281.61018.09837.01342.0138-2.6103QC'd by Specs
Inactive00040.9896009.6344004.278600.9896QC'd by GVK
Inactive0-5.5254.0950.6337-3.6963340 0 0 0 0 0 0 0-3.46713.29266.721104.917102.2046-3.4969-3.4671QC'd by Prestwick
Inactive00043.12693.073206.53832.82740-3.41288.31143.1269QC'd by Labotest
Inactive0004002.5786.65920003.36630QC'd by Prestwick
Inactive00042.6761008.9375000.40802.6761QC'd by Prestwick Chemical; Inc.
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:15316 靶标:N/A
External ID: s-dipg-DIPG13_CTG48h_mipe5_0-1
Protocol: JHH-DIPG-1, SU-DIPG-IV, SU-DIPG-VI, SU-DIPG-XIII, SU-DIPG-XVII and SU-DIPG-XXV were seeded into 1536 well white polystyrene tissue culture treated Corning plates using a MultiDrop Combi dispenser (ThermoFisher Scientific) and small cassette in 5 microL their normal growth media. Growth media was composed of 50% Neurobasal A, 50% DMEM/F12, as well as HEPES, sodium pyruvate, non-essential amino acids, GlutaMAX-I and antibiotic-antimycotic, B27 supplement without Vitamin A, human EGF, human FGF basic, human PDGF-AA and PDGF-BB, and heparin. Each cell line was plated at varying cell densities to allow cells to be in log growth phase at the time of compound addition. 23nL of MIPE 4.0 or MIPE 5.0 compounds as well as controls were added using a pintool dispenser. Controls used were DMSO only (positive control), 9.2uM Bortezomib and empty wells (negative controls). Compound addition occurred 4 hours after cell plating for SU-DIPG-IV, SU-DIPG-VI, SU-DIPG-XIII, SU-DIPG-XIII, SU-DIPG-XVII and SU-DIPG-XXV and 24 hours after cell plating for JHH-DIPG-1. Plates were then incubated for 48 hours at 37 degrees C/95% relative humidity/5% CO2, covered by a stainless steel gasketed lid to prevent evaporation. 3 microL of Cell Titer Glo (Promega) or CellTiter-Fluor (Promega) was added to each well using a solenoid valve dispenser then plates were incubated at room temperature for 15 minutes with a stainless steel lid in place. Luminescence readings were taken using a Viewlux (PerkinElmer) with a 2 second exposure time per plate. Relative luminscense units were used to calculate compound dose response curves which were normalized to DMSO and empty well controls on each plate for 100% cell viability and 0% cell viability, respectively.
Comment: Compound Ranking:

1. Compounds are first classified as having full titration curves, partial modulation, partial curve (weaker actives), single point activity (at highest concentration only), or inactive. See data field "Curve Description". For this assay, apparent inhibitors are ranked higher than compounds that showed apparent activation.

2. For all inactive compounds, PUBCHEM_ACTIVITY_SCORE is 0. For all active compounds, a score range was given for each curve class type given above. Active compounds have PUBCHEM_ACTIVITY_SCORE between 40 and 100. Inconclusive compounds have PUBCHEM_ACTIVITY_SCORE between 1 and 39. Fit_LogAC50 was used for determining relative score and was scaled to each curve class' score range.

3. Detailed PUBCHEM_ACTIVITY_SCORE calculation formula:
a. 80 + abs((LogAC50 + 4.5)*(100-Inf_activity) / 20), if curve class = -1.1
b. 60 + abs((LogAC50 + 4.5)*(100-Inf_activity) / 20), if curve class = -1.2 and abs(max response) < 40
c. 40 + abs((LogAC50 + 4.5)*(100-Inf_activity) / 20), if curve class = -2.1 or [curve class = -2.2 and abs(max response)] < 40
d. 20 + abs((LogAC50 + 4.5)*(100-Inf_activity) / 20), if curve class = (-1.2 or -2.2) and abs(max response) >= 40
e. 20, if curve class = -1.3, -1.4, -2.3, -2.4, -3
f. 10, if curve class > 0 but not fit the above categories
g. 0, if curve class = 4
PhenotypePotencyEfficacyAnalysis_CommentActivity_ScoreCurve_DescriptionFit_LogAC50Fit_HillSlopeFit_R2Fit_InfiniteActivityFit_ZeroActivityFit_CurveClassExcluded_PointsMax_ResponseActivity at Concentration_0 %Activity at Concentration_1 %Activity at Concentration_2 %Activity at Concentration_3 %Activity at Concentration_4 %Activity at Concentration_5 %Activity at Concentration_6 %Activity at Concentration_7 %Activity at Concentration_8 %Activity at Concentration_9 %Activity at Concentration_10 %Concentration_0 uMConcentration_1 uMConcentration_2 uMConcentration_3 uMConcentration_4 uMConcentration_5 uMConcentration_6 uMConcentration_7 uMConcentration_8 uMConcentration_9 uMConcentration_10 uMCompound_QC
Cytotoxic33.152289123.476807729920Single point of activity-4.47948647674.95491731340.8843306536-11.4750609999112.00174673-30 0 0 0 0 0 0 0 0 0 08.459464108.132089108.59832293.049264117.935057107.628887137.448055122.654751105.203701107.33169109.2822218.4594640.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by MedChem Express
Inconclusive2.6333830.72943710Complete curve; partial efficacy; poor fit-5.57948647674.95491731340.7048457687138.8756955108.14625851.40 0 0 0 0 0 0 0 0 0 178.880916108.117553115.28756114.0642114.663595102.4976389.762403114.749372108.291252143.278688134.07272178.8809160.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by Tocris
Inconclusive0.00104832.1088153610Complete curve; partial efficacy; poor fit-8.97948647674.95491731340.601529813105.3007689673.19195361.40 0 0 0 0 1 0 0 0 0 187.82506877.349581114.342382108.18515999.12688399.25727142.87230197.40628103.633138118.925855100.96891587.8250680.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by Microsource
Inactive000475.10154185.782548100.28343788.73891491.30263980.4503183.50967399.18441454.59001580.22336278.72670675.1015410.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by Glixx
Cytotoxic0.03315273.0846350574Complete curve; partial efficacy-7.47948647670.30.78572301896.548130279.63276525-1.20 0 0 0 0 0 0 0 0 0 07.00923156.81473572.46276652.82406230.76973734.55488832.35933530.874736.27849225.40546511.9737657.0092310.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by DC Chemicals
Inactive000492.91365106.032751114.319381119.332882105.287718104.568624112.009963124.910228111.272175133.21673895.71376692.913650.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by MedChem Express
Cytotoxic0.052543116.53277126591Complete curve; high efficacy-7.27948647674.95491731340.96708947717.92036948134.453140745-1.10 0 0 0 0 0 0 0 0 0 05.730128121.906597125.013539137.710462153.33652546.19663423.30506723.89404920.27907228.1804777.7926045.7301280.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by Cayman
Cytotoxic10.48367435.850264620Complete curve; partial efficacy-4.97948647674.95491731340.801404865843.673726879.5239914-1.20 0 0 0 0 0 0 0 0 0 044.2547982.16010676.01265881.54381775.22438890.61593667.5419285.8918870.83802383.06632547.83481544.254790.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by Prestwick
Inactive000479.84533393.445863107.78525898.43773899.94519898.19429482.640002134.75530298.11479993.57721776.93084779.8453330.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by MedChem Express
Inactive000486.173009114.561497121.545109107.404273129.191194138.742311105.31299696.54470489.081354116.112186114.66858386.1730090.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by Selleck
Inactive000495.62604393.94192692.973952118.14753297.589991114.19737293.159681126.62831888.81087975.899274116.93825695.6260430.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by MedChem Express
Cytotoxic0.00234766.966658720Complete curve; partial efficacy-8.62948647671.3310.803817086662.7159468129.6826055-1.20 0 0 0 0 0 0 0 0 0 061.849141122.5043193.47901167.93638586.40387564.14796149.28726564.65577551.82116864.9700669.94303261.8491410.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by Microsource
Cytotoxic16.61550493.518770841Partial curve; partial efficacy-4.77948647671.09999999990.84581252686.2876823599.80645315-2.20 0 0 0 0 0 0 0 0 0 025.11280496.79511398.36606388.566966114.886001101.48275686.909341112.44018996.77438966.24807164.18360425.1128040.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by APExBIO
Inactive000491.47367990.621579109.921672105.565332130.742561115.841089102.213097125.1864116.90786794.492528112.57503991.4736790.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by SIGMA
Cytotoxic9.343585107.4877420Partial curve; high efficacy; poor fit-5.02948647670.30.712559124222.4197114129.9074514-2.30 0 0 0 0 0 0 0 0 0 048.304721129.195376124.692009134.06321393.483614104.23840293.7641894.98283108.71848578.53923988.13779748.3047210.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by MedChem Express
Cytotoxic4.68288531.474601700120Complete curve; partial efficacy; poor fit-5.32948647673.51174816940.655822651386.6034791999118.0780809-1.40 0 0 1 0 0 0 0 0 0 084.357972122.082612129.403283120.596943-0.39863696.965696107.059014127.21666122.21468799.13824189.84942684.3579720.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by MedChem Express
Inconclusive0.00117637.74469810Complete curve; partial efficacy; poor fit-8.92948647674.95491731340.6382635662108.38136870.636671.40 0 0 0 0 0 0 0 0 0 0102.87037574.814484107.025103103.350416120.434181111.743559108.60387395.881107106.168475121.592624103.440686102.8703750.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by MedChem Express
Inactive000482.85344686.5347895.5484297.90537393.24897691.88791286.165292101.237684107.53306891.56437682.17182682.8534460.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by Microsource
Inconclusive0.00104842.870623210Complete curve; partial efficacy; poor fit-8.97948647674.95491731340.4347488409109.336093266.465471.40 0 0 1 0 0 0 0 0 0 0104.06319172.822474136.392514114.717194146.14672493.252574116.095525111.90187193.237295100.661581115.428107104.0631910.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by Microsource
Inactive000495.154144100.359863119.04291491.457487101.841871100.86654699.107206115.317614107.964032132.325945102.72745395.1541440.001560.00467999999990.0140.04210.1260.3791.13999999993.4110.19999999930.792.2QC'd by Tocris
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:NCGC 靶标:
External ID: NSD2-synergy-p-9B
Protocol: High-throughput drug screening of isogenic RCH-ACV cell lines was performed at the National Center for Advancing Translational Science (NCATS), National Institutes of Health as previously described (1). Briefly, isogenic RCH-ACV NSD2 p.E1099K mutant (9B) and WT cells (2C) were plated at 500 cells/well in a 1536-well plate with a 72-hour incubation with compounds prior to addition of CellTiter-Glo to assess cell viability. NCATS libraries screened include: NPC, MIPE 5.0, Kinase and NPACT. To determine compound activity in the qHTS assay, the concentration-response data for each sample was plotted and modeled by a four-parameter logistic fit yielding IC50 and efficacy (maximal response) values. The area under the curve (AUC) of the dose-response curve ensures both efficacy (magnitude of cell killing) and potency (concentration that elicits cell killing) are accounted for in the analysis of activity.

Reference:
1. Tobie D Lee, Olivia W Lee, Kyle R Brimacombe, Lu Chen, Rajarshi Guha, Sabrina Lusvarghi, Bethilehem G Tebase, Carleen Klumpp-Thomas, Robert W Robey, Suresh V Ambudkar, Min Shen, Michael M Gottesman, Matthew D Hall. A High-Throughput Screen of a Library of Therapeutics Identifies Cytotoxic Substrates of P-glycoprotein. Mol Pharmacol. 2019, Nov;96(5):629-640.
Comment: Disclaimer:
Although all reasonable efforts have been made to ensure the accuracy and reliability of the data, caution should be exercised when interpreting the results as artifacts are possible from nonspecific effects such as assay signal interference. The curve fitting and activity calls presented here are based on the NCATS analysis methods.

Compound Ranking:
1. Compounds are first classified as having full titration curves, partial modulation, partial curve (weaker actives), single point activity (at highest concentration only), or inactive. For this assay, apparent inhibitors are ranked higher than compounds that showed apparent activation.
2. For all inactive compounds, with a ratio activity curve class of 4, PUBCHEM_ACTIVITY_SCORE is 0. For all active compounds, a score range was given for each curve class type given above. Active compounds have PUBCHEM_ACTIVITY_SCORE between 40 and 100. For a ratio activity curve class = -1.1, score = 80+abs((log_ac50+4.5)*inf_activity/20). For ratio.curve_class == -1.2 && abs(ratio.max_response) > 6*10, score = 60+abs((log_ac50+4.5)*inf_activity/20). For ratio.curve_class == -2.1 || ( ratio.curve_class==-2.2 && abs(ratio.max_response) > 6*10), score = 40+abs((log_ac50+4.5)*inf_activity/20). For ratio.curve_class == -1.2 || ratio.curve_class == -2.2, score = 20+abs((log_ac50+4.5)*inf_activity/20). Inconclusive compounds, with a donor curve class other than 4, have PUBCHEM_ACTIVITY_SCORE of 10. Inconclusive compounds have PUBCHEM_ACTIVITY_SCORE between 1 and 39.
PhenotypePotencyEfficacyAnalysis CommentActivity_ScoreCurve_DescriptionFit_LogAC50Fit_HillSlopeFit_R2Fit_InfiniteActivityFit_ZeroActivityFit_CurveClassExcluded_PointsMax_ResponseActivity at 0.0000062633 uMActivity at 0.0000234000 uMActivity at 0.0000299492 uMActivity at 0.0000680174 uMActivity at 0.0001469594 uMActivity at 0.0003236290 uMActivity at 0.0006759500 uMActivity at 0.00129 uMActivity at 0.00271 uMActivity at 0.00485 uMActivity at 0.00758 uMActivity at 0.016 uMActivity at 0.038 uMActivity at 0.071 uMActivity at 0.177 uMActivity at 0.355 uMActivity at 0.588 uMActivity at 1.399 uMActivity at 1.898 uMActivity at 4.965 uMActivity at 9.229 uMActivity at 17.27 uMActivity at 44.90 uMActivity at 91.89 uMActivity at 155.1 uMActivity at 231.0 uMCompound QC
Inhibitor0.001595.0131100Complete curve; high efficacy-8.82954.95490.995-92.98592.0272-1.10 0 0 0 0 0 0 0 0 0 0-96.2587-1.6791-84.9271-90.9202-90.8631-90.7375-92.2911-92.6732-94.1019-94.0673-96.0913-96.2587QC'd by SIGMA
Inhibitor0.001796.0144100Complete curve; high efficacy-8.76833.24750.9987-95.37860.6358-1.10 0 0 0 0 0 0 0 0 0 0-96.92941.7123-0.1391-34.4453-93.3159-93.9442-94.1795-94.3745-94.7424-94.9325-95.6129-96.9294QC'd by MedChem Express
Inhibitor0.0017101.1335100Complete curve; high efficacy-8.76834.50450.9988-96.45574.6778-1.10 0 0 0 0 0 0 0 0 0 0-98.62542.93835.3252-23.8352-93.6078-94.3407-94.7755-96.5382-96.9802-98.093-97.488-98.6254QC'd by MedChem Express
Inhibitor0.001495.7664100Complete curve; high efficacy-8.86833.06540.9932-91.73124.0352-1.10 0 0 0 0 0 0 0 0 0 0-94.373606.5073-50.3576-85.2142-89.4583-90.3553-90.6328-93.2878-91.6178-92.6738-94.3736QC'd by MedChem Express
Inhibitor0.002792.056799Complete curve; high efficacy-8.5753.990.9971-93.082-1.0254-1.10 0 0 0 0 0 0 0-97.5703-1.153-56.5542-91.9507-92.331-93.0234-92.9105-92.2466-97.5703QC'd by Alfa Aesar
Inhibitor0.002786.152899Complete curve; high efficacy-8.5754.95490.9984-92.0573-5.9045-1.10 0 0 0 0 0 0 0-92.9872-5.0961-62.3948-91.5014-91.2009-92.0539-90.8793-91.9519-92.9872QC'd by Microsource
Inhibitor0.002198.487899Complete curve; high efficacy-8.6754.50450.9983-91.97956.5083-1.10 0 0 0 0 0 0 0-94.04855.8681-73.3835-89.9758-90.798-91.9458-91.2065-93.7497-94.0485QC'd by Bosche
Inhibitor7.0E-482.733499Complete curve; high efficacy-9.1750.60.8847-82.65670.0767-1.10 0 0 0 0 0 0 0-94.3569-37.5208-62.7186-72.7916-74.3825-79.8918-76.6331-78.5528-94.3569QC'd by Selleck
Inhibitor0.003795.081999Complete curve; high efficacy-8.43621.22210.9994-94.52050.5614-1.10 0 0 0 0 0 0-93.7704-1.16310.6157-11.9264-47.6173-82.383-92.7843-93.7704QC'd by Adooq
Inhibitor0.003394.047999Complete curve; high efficacy-8.47953.51170.9958-93.96230.0856-1.10 0 0 0 0 0 0 0 0 0 0-97.87741.2665-23.1756-88.8678-90.2585-91.8229-92.3997-94.1271-95.2991-93.6757-95.8566-97.8774QC'd by MedChem Express
Inhibitor0.0047102.007598Complete curve; high efficacy-8.32952.24810.997-94.17637.8312-1.10 0 0 0 0 0 0 0 0 0 0-98.71735.6987-9.7434-65.3554-90.638-91.2058-92.371-92.7427-94.2549-94.3053-96.979-98.7173QC'd by GVK
Inhibitor0.0047100.42998Complete curve; high efficacy-8.3253.67720.9994-93.22767.2013-1.10 0 0 0 0 0 0 0-94.74358.1328-8.6557-90.5176-92.1158-93.5383-93.4255-92.4974-94.7435QC'd by Prestwick
Inhibitor0.003896.763498Complete curve; high efficacy-8.4253.990.9994-92.02054.743-1.10 0 0 0 0 0 0 0-93.51674.0536-21.1619-91.8053-91.1174-91.9789-90.7784-91.2901-93.5167QC'd by Selleck
Inhibitor0.004590.539798Complete curve; high efficacy-8.34664.50450.9995-92.4565-1.9167-1.10 0 0 0 0 0 0-93.156-4.128-89.5728-91.2217-93.3904-92.524-93.0057-93.156QC'd by Selleck
Inhibitor0.005298.298798Complete curve; high efficacy-8.2884.95490.9993-92.65815.6406-1.10 0 0 0 0 0 0-93.59410-91.9394-91.381-91.3804-93.5391-93.3571-93.5941QC'd by ChemieTek
Inhibitor0.005298.854698Complete curve; high efficacy-8.2880.60.9861-94.11974.7349-1.10 0 0 0 0 0 0-93.9318-33.6729-64.3585-76.1096-84.2151-92.4038-93.1111-93.9318QC'd by MedChem Express
Inhibitor0.00486.042698Complete curve; high efficacy-8.39924.50450.9996-92.288-6.2454-1.10 0 0 0 0 0 0-91.795-7.0299-86.4668-91.4418-93.2202-92.6549-92.4417-91.795QC'd by Selleck
Inhibitor0.004698.020398Complete curve; high efficacy-8.3383.51170.9996-93.16844.8519-1.10 0 0 0 0 0 0-93.7644-11.8828-91.4502-92.2553-94.1095-92.9439-93.2642-93.7644QC'd by SIGMA
Inhibitor0.0042104.449798Complete curve; high efficacy-8.37954.95490.9968-93.920410.5293-1.10 0 0 0 0 0 0 0 0 0 0-96.62598.66757.5142-90.2575-91.0844-91.1114-92.6871-93.2743-95.4523-94.079-95.5345-96.6259QC'd by BioAustralis
Inhibitor0.004294.942198Complete curve; high efficacy-8.37952.84730.9968-94.75910.183-1.10 0 0 0 0 0 0 0 0 0 0-96.93990.6808-16.1375-78.234-91.1234-91.9081-92.3507-95.4781-97.4887-95.7111-95.4747-96.9399QC'd by ActiveBioChem
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:15316 靶标:N/A
External ID: s-dipg-DIPG25_CTG48h_mipe5_0-2
Protocol: JHH-DIPG-1, SU-DIPG-IV, SU-DIPG-VI, SU-DIPG-XIII, SU-DIPG-XVII and SU-DIPG-XXV were seeded into 1536 well white polystyrene tissue culture treated Corning plates using a MultiDrop Combi dispenser (ThermoFisher Scientific) and small cassette in 5 microL their normal growth media. Growth media was composed of 50% Neurobasal A, 50% DMEM/F12, as well as HEPES, sodium pyruvate, non-essential amino acids, GlutaMAX-I and antibiotic-antimycotic, B27 supplement without Vitamin A, human EGF, human FGF basic, human PDGF-AA and PDGF-BB, and heparin. Each cell line was plated at varying cell densities to allow cells to be in log growth phase at the time of compound addition. 23nL of MIPE 4.0 or MIPE 5.0 compounds as well as controls were added using a pintool dispenser. Controls used were DMSO only (positive control), 9.2uM Bortezomib and empty wells (negative controls). Compound addition occurred 4 hours after cell plating for SU-DIPG-IV, SU-DIPG-VI, SU-DIPG-XIII, SU-DIPG-XIII, SU-DIPG-XVII and SU-DIPG-XXV and 24 hours after cell plating for JHH-DIPG-1. Plates were then incubated for 48 hours at 37 degrees C/95% relative humidity/5% CO2, covered by a stainless steel gasketed lid to prevent evaporation. 3 microL of Cell Titer Glo (Promega) or CellTiter-Fluor (Promega) was added to each well using a solenoid valve dispenser then plates were incubated at room temperature for 15 minutes with a stainless steel lid in place. Luminescence readings were taken using a Viewlux (PerkinElmer) with a 2 second exposure time per plate. Relative luminscense units were used to calculate compound dose response curves which were normalized to DMSO and empty well controls on each plate for 100% cell viability and 0% cell viability, respectively.
Comment: Compound Ranking:

1. Compounds are first classified as having full titration curves, partial modulation, partial curve (weaker actives), single point activity (at highest concentration only), or inactive. See data field "Curve Description". For this assay, apparent inhibitors are ranked higher than compounds that showed apparent activation.

2. For all inactive compounds, PUBCHEM_ACTIVITY_SCORE is 0. For all active compounds, a score range was given for each curve class type given above. Active compounds have PUBCHEM_ACTIVITY_SCORE between 40 and 100. Inconclusive compounds have PUBCHEM_ACTIVITY_SCORE between 1 and 39. Fit_LogAC50 was used for determining relative score and was scaled to each curve class' score range.

3. Detailed PUBCHEM_ACTIVITY_SCORE calculation formula:
a. 80 + abs((LogAC50 + 4.5)*(100-Inf_activity) / 20), if curve class = -1.1
b. 60 + abs((LogAC50 + 4.5)*(100-Inf_activity) / 20), if curve class = -1.2 and abs(max response) < 40
c. 40 + abs((LogAC50 + 4.5)*(100-Inf_activity) / 20), if curve class = -2.1 or [curve class = -2.2 and abs(max response)] < 40
d. 20 + abs((LogAC50 + 4.5)*(100-Inf_activity) / 20), if curve class = (-1.2 or -2.2) and abs(max response) >= 40
e. 20, if curve class = -1.3, -1.4, -2.3, -2.4, -3
f. 10, if curve class > 0 but not fit the above categories
g. 0, if curve class = 4
PhenotypePotencyEfficacyAnalysis_CommentActivity_ScoreCurve_DescriptionFit_LogAC50Fit_HillSlopeFit_R2Fit_InfiniteActivityFit_ZeroActivityFit_CurveClassExcluded_PointsMax_ResponseActivity at Concentration_0 %Activity at Concentration_1 %Activity at Concentration_2 %Activity at Concentration_3 %Activity at Concentration_4 %Activity at Concentration_5 %Activity at Concentration_6 %Activity at Concentration_7 %Activity at Concentration_8 %Activity at Concentration_9 %Activity at Concentration_10 %Concentration_0 uMConcentration_1 uMConcentration_2 uMConcentration_3 uMConcentration_4 uMConcentration_5 uMConcentration_6 uMConcentration_7 uMConcentration_8 uMConcentration_9 uMConcentration_10 uMCompound_QC
Cytotoxic18.642902126.1548586841Partial curve; high efficacy-4.72948647672.33317337670.8957088719-3.21467216122.94018652-2.10 0 0 0 0 0 0 0 0 0 07.036886135.181363130.1405104.362997119.774039111.275951122.925455143.049958104.930586124.4815377.37347.0368860.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by MedChem Express
Inactive0004103.545737123.621755100.682459123.474568103.869227113.528395105.680422111.096214117.297596118.942261119.467475103.5457370.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by Tocris
Cytotoxic16.61550444.354028221Partial curve; partial efficacy-4.77948647674.44947028490.78286515963.3892022107.7432304-2.20 0 0 0 0 0 0 0 0 0 060.487552107.383667104.781148117.21448298.930031100.4257297.352274106.273793114.136965121.89191888.78455860.4875520.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by Microsource
Inactive000480.32899183.541127117.89959787.599574100.96724692.67898588.21999299.605631108.52759372.99213490.84226280.3289910.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by Glixx
Cytotoxic0.00661536.8561290477Complete curve; partial efficacy-8.17948647670.89999999990.95210638138.5018709645.358-1.20 0 0 0 0 0 0 0 0 0 04.24414841.35834.14584629.07488714.25880114.55767611.19084413.3998129.4150339.0506035.6608384.2441480.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by DC Chemicals
Cytotoxic0.00117631.2959116420Complete curve; partial efficacy; poor fit-8.92948647674.95491731340.456449356296.15583006127.4517417-1.40 0 0 0 0 0 0 0 0 0 080.677741123.75996494.851007101.736722101.07786192.567357111.282872104.7135491.13491399.40269682.79042180.6777410.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by MedChem Express
Cytotoxic0.029547108.16617699293Complete curve; high efficacy-7.52948647671.88511806010.969790254516.354511228124.52068822-1.10 0 0 0 0 0 0 0 0 0 05.895046133.4495113.437443113.10503796.93827427.74598520.81712519.29872325.42304825.1524878.5514725.8950460.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by Cayman
Cytotoxic16.61550448.904126420Partial curve; partial efficacy; poor fit-4.77948647670.60.693507609345.187134594.0912609-2.40 0 0 0 0 0 0 0 0 0 057.66926894.2560492.771981109.31705993.52797878.88431985.68990689.34399782.01955986.20966971.20121957.6692680.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by Prestwick
Inactive0004128.81544699.545739114.716369103.28791898.83854597.453949100.23423191.379116113.399625125.17569279.031756128.8154460.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by MedChem Express
Inactive000489.193791122.605607106.43189111.068548105.130989121.76273493.238715112.033644122.43667102.501996105.78600389.1937910.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by Selleck
Inconclusive8.32747940.0206236310Partial curve; partial efficacy; poor fit-5.07948647670.40.3959180781139.4395426899.418919052.40 0 0 0 0 0 0 0 0 0 0130.74216795.873383105.32166490.483902125.70354595.047279101.583048121.782718112.263002101.33735127.403662130.7421670.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by MedChem Express
Cytotoxic0.01176395.42325908820Complete curve; high efficacy; poor fit-7.92948647670.59999999990.940077646849.171944812144.5952039-1.30 0 0 0 0 0 0 0 1 0 044.332311137.402192104.536339103.47750899.69655671.49365862.50601754.18079453.63088103.50472958.00093844.3323110.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by Microsource
Cytotoxic33.152289127.7462098820Partial curve; high efficacy; poor fit-4.47948647670.30.5331979063-20.28688418107.4593257-2.30 0 0 0 0 0 0 0 0 0 08.345887118.4719374.07223387.76889294.52896372.73486581.81970677.54783788.54171779.5721666.3834128.3458870.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by APExBIO
Inactive0004133.178033137.067799133.443737114.17185699.584738123.606191130.745107104.902403121.538454105.00966109.594919133.1780330.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by SIGMA
Cytotoxic6.614751118.8433118843Partial curve; high efficacy-5.17948647670.30.87027976869.02331972127.8666316-2.10 0 0 0 0 0 0 0 0 0 038.752713131.657067112.576146119.03211990.392279100.246645104.88416394.88114580.53665880.19111861.15795138.7527130.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by MedChem Express
Inactive0004121.571519113.578656119.299731106.740835107.123683106.258077100.355347128.22597492.829566113.02715119.615628121.5715190.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by MedChem Express
Inactive0004114.10255106.795649104.918473117.387121100.57819193.660496104.71608697.616338111.949898147.44102798.022102114.102550.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by MedChem Express
Inactive000487.018235102.76369793.66206788.6582682.9236696.236805115.491274104.94457199.00419994.99465689.54212387.0182350.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by Microsource
Inactive0004113.561231126.425316107.27942394.516518113.9520187.102689104.49478104.28234483.261185125.02762189.903851113.5612310.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by Microsource
Inactive0004101.413011106.644436110.826043110.98109387.71430297.43169495.978601102.836951116.29218896.225349110.394607101.4130110.001560.00467999999990.0140.04210.1260.3791.13999999993.4110.19999999930.792.2QC'd by Tocris
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:NCGC 靶标:
External ID: s-sky_synergy-MV-411_DR-CTG72-MIPE_NPC_NPACT_Kinase-p1
Protocol: PROTOCOL TABLE
SEQUENCE No. (e.g., 1, 2, 3, etc.); PARAMETER (e.g., Cells, Incubation, Reagent, etc.); VALUE; DESCRIPTION.
1; Media; 2uL; white, solid-bottom Corning assay plate.
2; Compounds; 23nL; Echo acoustic dispenser.
3; Cell; 5uL; 500 cells per well.
4: Incubation; 72hr; 37 C, 5% CO2, 95% humidity.
5; Reagent; 3uL; CellTiter-Glo reagent (Promega).
6; Incubation; 10min; room temperature.
7; Detection; Luminescence; ViewLux plate reader (PerkinElmer).

NOTES (numbers refer to Sequence numbers above
1. Quantitative high-throughput screening (qHTS) of small molecule compounds was conducted on drug resistant SYKi MV4-11 cell line. Briefly, 2uL growth media (RPMI 1640 + 1% penicillin/streptomycin + 10% FBS) were added into an assay plate using a Multidrop Combi dispenser (Thermo Fisher Scientific).
2. Twenty-three nanoliter of small molecule compounds were added to each assay plates using the Echo acoustic dispenser (Beckman Coulter).
3. Cells were seeded into the assay plates at a final density of 500 cells in 5uL of media per well using the Multidrop Combi dispenser.
4. Plates were covered with stainless steel gasketed lids and incubated for 72 hours at standard cell culture conditions.
5. Viability was assessed by adding 3uL of CellTiter-Glo detection reagent (Promega).
6. Plates were covered with gasket lids and incubated for 10 minutes at room temperature.
7. Luminescence was measured on a ViewLux plate reader (PerkinElmer).
Comment: Disclaimer:
Although all reasonable efforts have been made to ensure the accuracy and reliability of the data, caution should be exercised when interpreting the results as artifacts are possible from nonspecific effects such as assay signal interference. The curve fitting and activity calls presented here are based on the NCATS analysis methods [1].

Compound Ranking:
1. Compounds are first classified as having full titration curves, partial modulation, partial curve (weaker actives), single point activity (at highest concentration only), or inactive. For this assay, apparent cytotoxic compounds are ranked higher than compounds that showed no activity.
2. For all inactive compounds, with a ratio activity curve class of 4, PUBCHEM_ACTIVITY_SCORE is 0. For all active compounds, a score range was given for each curve class type given above. Active compounds have PUBCHEM_ACTIVITY_SCORE between 40 and 100. For a ratio activity curve class = -1.1, score = 80+abs((log_ac50+4.5)*inf_activity/20). For ratio.curve_class == -1.2 && abs(ratio.max_response) > 6*10, score = 60+abs((log_ac50+4.5)*inf_activity/20). For ratio.curve_class == -2.1 || ( ratio.curve_class==-2.2 && abs(ratio.max_response) > 6*10), score = 40+abs((log_ac50+4.5)*inf_activity/20). For ratio.curve_class == -1.2 || ratio.curve_class == -2.2, score = 20+abs((log_ac50+4.5)*inf_activity/20). Inconclusive compounds, with a donor curve class other than 4, have PUBCHEM_ACTIVITY_SCORE of 10. Inconclusive compounds have PUBCHEM_ACTIVITY_SCORE between 1 and 39.

Reference:
1. Inglese J, Auld DS, Jadhav A, et al. Quantitative high-throughput screening: a titration-based approach that efficiently identifies biological activities in large chemical libraries. Proc Natl Acad Sci U S A. 2006;103(31):11473-11478.
PhenotypePotencyEfficacyAnalysis CommentActivity_ScoreCurve_DescriptionFit_LogAC50Fit_HillSlopeFit_R2Fit_InfiniteActivityFit_ZeroActivityFit_CurveClassExcluded_PointsMax_ResponseActivity at 0.0000062652 uMActivity at 0.0000234000 uMActivity at 0.0000299754 uMActivity at 0.0000680318 uMActivity at 0.0001469781 uMActivity at 0.0003237363 uMActivity at 0.0006761082 uMActivity at 0.00130 uMActivity at 0.00271 uMActivity at 0.00486 uMActivity at 0.00759 uMActivity at 0.016 uMActivity at 0.038 uMActivity at 0.071 uMActivity at 0.177 uMActivity at 0.356 uMActivity at 0.588 uMActivity at 1.402 uMActivity at 1.903 uMActivity at 4.972 uMActivity at 9.253 uMActivity at 17.29 uMActivity at 44.98 uMActivity at 91.90 uMActivity at 155.1 uMActivity at 231.0 uMCompound QC
Cytotoxic0.00882.203484Complete curve; high efficacy-8.09921.010.966921.0427103.2462-1.10 0 0 0 0 0 013.188495.474859.067235.842331.665221.923822.070613.1884QC'd by Analyticon
Cytotoxic0.025981.057283Complete curve; high efficacy-7.58624.95490.92316.497297.5544-1.10 0 0 0 0 0 02.512597.003593.26858.94736.670723.420912.53742.5125QC'd by MedChem Express
Cytotoxic0.819985.290183Complete curve; high efficacy-6.08621.75290.99432.3577117.6478-1.10 0 0 0 0 0 034.7953115.2038115.6711122.1398.373449.123231.010634.7953QC'd by Glixx
Cytotoxic0.0190.438383Complete curve; high efficacy-7.99921.06410.985619.9781110.4164-1.10 0 0 0 0 0 013.8267101.704171.224135.805628.627925.082819.478713.8267QC'd by Analyticon
Cytotoxic0.0092105.836183Complete curve; high efficacy-8.03624.0950.998416.204122.0401-1.10 0 0 0 0 0 013.8473120.968928.848618.13117.368317.353714.687813.8473QC'd by SIGMA
Cytotoxic0.468384.095583Complete curve; high efficacy-6.32954.44950.96929.5128113.6083-1.10 0 0 0 0 0 0 0 0 0 021.2667108.9911100.6389111.6185114.5273123.8697121.846750.484436.16335.491326.950121.2667QC'd by MedChem Express
Cytotoxic0.104882.764282Complete curve; high efficacy-6.97951.41630.983812.632295.3964-1.10 0 0 0 0 0 0 0 0 0 010.575588.311793.092698.209696.743461.009638.863620.85115.78315.70359.904810.5755QC'd by BIOMOL
Cytotoxic0.177891.15582Complete curve; high efficacy-6.750.60.967113.9433105.0983-1.10 0 0 0 0 0 09.94996.781688.005652.483744.630729.767723.42539.949QC'd by Waterstone
Cytotoxic0.0106101.825682Complete curve; high efficacy-7.9752.72020.992711.1635112.9891-1.10 0 0 0 0 0 0 010.2995105.5432116.579542.386110.210110.828611.463311.646810.2995QC'd by Prestwick
Cytotoxic0.668497.583882Complete curve; high efficacy-6.1752.33320.990218.8259116.4097-1.10 0 0 0 0 0 0 015.8771121.1891108.6953122.087113.851596.846325.162623.985315.8771QC'd by Enzo
Cytotoxic0.042299.181282Complete curve; high efficacy-7.3751.34430.993310.554109.7352-1.10 0 0 0 0 0 0 010.7613114.3989100.783890.706544.474211.202813.845711.361610.7613QC'd by Tocris
Cytotoxic0.007584.106682Complete curve; high efficacy-8.1254.95490.99839.434493.541-1.10 0 0 0 0 0 0 06.535491.798594.110412.665511.09298.63279.997110.07546.5354QC'd by Bosche
Cytotoxic0.421785.920382Complete curve; high efficacy-6.3750.80.962221.4982107.4185-1.10 0 0 0 0 0 0 016.639100.4185107.3168112.829384.599367.881738.354237.879716.639QC'd by Vitas
Cytotoxic0.145895.744482Complete curve; high efficacy-6.83621.55790.976614.7016110.446-1.10 0 0 0 0 0 04.7392104.3625115.347884.378731.790525.599818.03364.7392QC'd by Microsource
Cytotoxic0.0036107.247382Complete curve; high efficacy-8.4444.95490.99898.6172115.8646-1.10 0 0 0 0 0 07.4398110.64829.223610.03329.4928.91416.32217.4398QC'd by Selleck
Cytotoxic0.163680.294782Complete curve; high efficacy-6.78622.04790.976317.79598.0898-1.10 0 0 0 0 0 06.7352100.462595.567485.02829.253227.68320.08926.7352QC'd by Selleck
Cytotoxic0.023197.640682Complete curve; high efficacy-7.63624.95490.999510.3864108.027-1.10 0 0 0 0 0 010.177107.94198.68449.835111.696111.67178.800110.177QC'd by Selleck
Cytotoxic1.587786.327482Complete curve; high efficacy-5.79921.3310.964223.21109.5374-1.10 0 0 0 0 0 029.2744118.455699.7114104.7412100.992385.097633.922129.2744QC'd by MedChem Express
Cytotoxic0.014689.488582Complete curve; high efficacy-7.83621.28760.99529.344198.8326-1.10 0 0 0 0 0 07.000590.702951.556722.53611.87749.85658.1887.0005QC'd by SynKinase
Cytotoxic0.006596.843182Complete curve; high efficacy-8.18624.0950.99488.9496105.7927-1.10 0 0 0 0 0 03.839102.120912.445311.444810.88219.89667.70273.839QC'd by Selleck
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:15316 靶标:N/A
External ID: s-dipg-JHHDIPG1_CTG48h_mipe5_0-1
Protocol: JHH-DIPG-1, SU-DIPG-IV, SU-DIPG-VI, SU-DIPG-XIII, SU-DIPG-XVII and SU-DIPG-XXV were seeded into 1536 well white polystyrene tissue culture treated Corning plates using a MultiDrop Combi dispenser (ThermoFisher Scientific) and small cassette in 5 microL their normal growth media. Growth media was composed of 50% Neurobasal A, 50% DMEM/F12, as well as HEPES, sodium pyruvate, non-essential amino acids, GlutaMAX-I and antibiotic-antimycotic, B27 supplement without Vitamin A, human EGF, human FGF basic, human PDGF-AA and PDGF-BB, and heparin. Each cell line was plated at varying cell densities to allow cells to be in log growth phase at the time of compound addition. 23nL of MIPE 4.0 or MIPE 5.0 compounds as well as controls were added using a pintool dispenser. Controls used were DMSO only (positive control), 9.2uM Bortezomib and empty wells (negative controls). Compound addition occurred 4 hours after cell plating for SU-DIPG-IV, SU-DIPG-VI, SU-DIPG-XIII, SU-DIPG-XIII, SU-DIPG-XVII and SU-DIPG-XXV and 24 hours after cell plating for JHH-DIPG-1. Plates were then incubated for 48 hours at 37 degrees C/95% relative humidity/5% CO2, covered by a stainless steel gasketed lid to prevent evaporation. 3 microL of Cell Titer Glo (Promega) or CellTiter-Fluor (Promega) was added to each well using a solenoid valve dispenser then plates were incubated at room temperature for 15 minutes with a stainless steel lid in place. Luminescence readings were taken using a Viewlux (PerkinElmer) with a 2 second exposure time per plate. Relative luminscense units were used to calculate compound dose response curves which were normalized to DMSO and empty well controls on each plate for 100% cell viability and 0% cell viability, respectively.
Comment: Compound Ranking:

1. Compounds are first classified as having full titration curves, partial modulation, partial curve (weaker actives), single point activity (at highest concentration only), or inactive. See data field "Curve Description". For this assay, apparent inhibitors are ranked higher than compounds that showed apparent activation.

2. For all inactive compounds, PUBCHEM_ACTIVITY_SCORE is 0. For all active compounds, a score range was given for each curve class type given above. Active compounds have PUBCHEM_ACTIVITY_SCORE between 40 and 100. Inconclusive compounds have PUBCHEM_ACTIVITY_SCORE between 1 and 39. Fit_LogAC50 was used for determining relative score and was scaled to each curve class' score range.

3. Detailed PUBCHEM_ACTIVITY_SCORE calculation formula:
a. 80 + abs((LogAC50 + 4.5)*(100-Inf_activity) / 20), if curve class = -1.1
b. 60 + abs((LogAC50 + 4.5)*(100-Inf_activity) / 20), if curve class = -1.2 and abs(max response) < 40
c. 40 + abs((LogAC50 + 4.5)*(100-Inf_activity) / 20), if curve class = -2.1 or [curve class = -2.2 and abs(max response)] < 40
d. 20 + abs((LogAC50 + 4.5)*(100-Inf_activity) / 20), if curve class = (-1.2 or -2.2) and abs(max response) >= 40
e. 20, if curve class = -1.3, -1.4, -2.3, -2.4, -3
f. 10, if curve class > 0 but not fit the above categories
g. 0, if curve class = 4
PhenotypePotencyEfficacyAnalysis_CommentActivity_ScoreCurve_DescriptionFit_LogAC50Fit_HillSlopeFit_R2Fit_InfiniteActivityFit_ZeroActivityFit_CurveClassExcluded_PointsMax_ResponseActivity at Concentration_0 %Activity at Concentration_1 %Activity at Concentration_2 %Activity at Concentration_3 %Activity at Concentration_4 %Activity at Concentration_5 %Activity at Concentration_6 %Activity at Concentration_7 %Activity at Concentration_8 %Activity at Concentration_9 %Activity at Concentration_10 %Concentration_0 uMConcentration_1 uMConcentration_2 uMConcentration_3 uMConcentration_4 uMConcentration_5 uMConcentration_6 uMConcentration_7 uMConcentration_8 uMConcentration_9 uMConcentration_10 uMCompound_QC
Cytotoxic23.470023101.927435057941Partial curve; high efficacy-4.62948647674.09497298630.969961685-1.7053407579100.2220943-2.10 0 0 0 0 0 0 0 0 0 06.24482298.688575108.47944299.96375389.127899105.63825598.74874101.186836101.54169896.66048686.4159426.2448220.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by MedChem Express
Inactive000492.29319299.426598115.870162118.10835195.421059110.29017898.095024114.45728894.529502114.453938106.66157392.2931920.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by Tocris
Cytotoxic26.33379943.184989879920Single point of activity-4.57948647674.09497298630.729579733253.7682947296.9532845999-30 0 0 0 0 0 0 0 0 0 057.718456101.3127189.56844288.593017100.57348492.93228583.72574291.54119899.7089794.09668692.33880757.7184560.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by Microsource
Inactive000484.825137102.75363288.07283195.444103101.66945398.38625994.73971696.11249889.72964297.16341988.73770884.8251370.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by Glixx
Cytotoxic0.00742232.468831560174Complete curve; partial efficacy-8.12948647670.89999999990.812327351320.504841739952.9736733-1.20 0 0 0 0 0 0 0 0 0 022.75436449.80732543.79630338.08121528.60718125.24237424.25197224.1363956.47080824.82560124.44473722.7543640.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by DC Chemicals
Cytotoxic37.1974840.220349699920Single point of activity-4.42948647674.95491731340.699597611952.035546692.2558962999-30 0 0 0 0 0 0 0 0 0 061.14271286.20893688.14762590.89802384.332843102.08191894.35866383.79783195.70059999.71122895.09896561.1427120.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by MedChem Express
Cytotoxic0.05254379.5640227770Complete curve; partial efficacy-7.27948647673.92947298630.92694480425.86514974105.42917251-1.20 0 0 0 0 0 0 0 0 0 05.573654112.37194.842613102.158108111.57782548.20805935.49841130.64261434.76506838.61096612.8287975.5736540.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by Cayman
Cytotoxic4.17362672.3216220463Complete curve; partial efficacy-5.37948647670.60.9614868321.1663627693.4879848-1.20 0 0 0 0 0 0 0 0 0 037.50482196.37500390.19749294.18153386.40001389.16714382.65152481.2916461.45769161.7407837.76925137.5048210.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by Prestwick
Cytotoxic0.0234735.329307240120Complete curve; partial efficacy; poor fit-7.62948647670.40.70736036976.2986221599111.6279294-1.40 0 0 0 0 0 0 0 1 0 087.944813107.79405296.764414101.45829689.89956794.86153387.50585983.5687283.25481939.39642666.13282687.9448130.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by MedChem Express
Inactive0004103.031807110.057696134.713497113.113215114.985563121.143028121.499758115.019309109.702305109.60676898.516749103.0318070.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by Selleck
Inactive0004100.31678994.438418102.051197107.72793893.571047103.819834101.46756790.66174893.97112461.65781195.315529100.3167890.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by MedChem Express
Inactive000493.25919993.83911889.71642381.1766298.71720796.32178695.15954891.98443895.39435478.45199793.24124193.2591990.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by Microsource
Cytotoxic23.47002361.705034820Partial curve; partial efficacy; poor fit-4.62948647674.09497298630.816272604622.015743483.7207782-2.40 0 0 0 0 0 0 1 0 0 027.01574287.60327185.24330685.69882382.13306166.29677585.16732979.0440291.630052100.8406772.92890527.0157420.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by APExBIO
Inactive0004105.10516104.907652129.28363118.68586995.326261116.883115.30465111.108438100.0001468.933542123.732485105.105160.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by SIGMA
Cytotoxic2.6333865.0240935420Partial curve; partial efficacy; poor fit-5.57948647670.30.820100382550.9357387599115.9598322999-2.40 0 1 0 0 0 0 0 0 0 067.369363118.584758101.59480933.144001102.45879889.37383697.98168699.90603889.22672484.13516767.33550167.3693630.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by MedChem Express
Inactive000496.829284104.718454116.958053109.448475101.536594124.332114110.040354108.808863104.915619118.04415398.04752796.8292840.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by MedChem Express
Inactive000487.50244481.77783794.09963790.56028299.2577392.24653795.81513878.10286889.579285.34409585.92236387.5024440.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by MedChem Express
Inactive000494.62457478.78888987.88027884.168864100.01317997.18752497.5052887.31776293.10300797.770125106.57003394.6245740.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by Microsource
Inactive000492.67259111.784418106.25748284.69107189.62811182.45924992.19113998.43981976.86174977.27578792.31930892.672590.000780.00233999999990.007020.02110.06320.189999999990.5691.715.1215.39999999946.1QC'd by Microsource
Inactive000492.09437196.6555798.621866109.289861112.14935196.426999103.572903111.58341190.413272105.964669108.84899792.0943710.001560.00467999999990.0140.04210.1260.3791.13999999993.4110.19999999930.792.2QC'd by Tocris
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:ChEMBL 靶标:HEK293
External ID: CHEMBL4296191
Protocol: N/A
Comment: Compounds with activity <= 10uM or explicitly reported as active by ChEMBL are flagged as active in this PubChem assay presentation.

Target ChEMBL ID: CHEMBL614818
ChEMBL Target Name: HEK293
ChEMBL Target Type: CELL-LINE - Target is a specific cell-line
Relationship Type: N - Non-molecular target assigned
Confidence: Target assigned is non-molecular

Data Source: CO-ADD Antimicrobial Screening
PubChem Standard ValueStandard TypeStandard RelationStandard ValueStandard UnitsActivity Comment
10CC50>10000nMMedian N= 2; Maxinhib 33.3 Pct
2.37CC50=2370nMMedian N= 2; Range 3.25 - 2.37 Um
20CC50>20000nMMedian N= 2; Maxinhib 28.6 Pct
10CC50>10000nMMedian N= 2; Maxinhib 38.8 Pct
20CC50>20000nMMedian N= 2; Maxinhib 25.1 Pct
10CC50>10000nMMedian N= 2; Maxinhib 14.6 Pct
20CC50>20000nMMedian N= 2; Maxinhib 9.0 Pct
1.13CC50=1130nMMedian N= 2; Range 1.16 - 1.13 Um
10CC50>10000nMMedian N= 2; Maxinhib 21.9 Pct
20CC50>20000nMMedian N= 2; Maxinhib 27.6 Pct
10CC50>10000nMMedian N= 2; Maxinhib 12.3 Pct
10CC50>10000nMMedian N= 2; Maxinhib 39.0 Pct
10CC50>10000nMMedian N= 2; Maxinhib 44.0 Pct
20CC50>20000nMMedian N= 2; Maxinhib 19.6 Pct
20CC50>20000nMMedian N= 2; Maxinhib 26.9 Pct
20CC50>20000nMMedian N= 2; Maxinhib 32.2 Pct
20CC50>20000nMMedian N= 2; Maxinhib 16.0 Pct
20CC50>20000nMMedian N= 2; Maxinhib 33.3 Pct
20CC50>20000nMMedian N= 2; Maxinhib 40.6 Pct
20CC50>20000nMMedian N= 2; Maxinhib 27.8 Pct
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:ChEMBL 靶标:N/A
External ID: CHEMBL2073514
Protocol: N/A
Comment: Compounds with activity <= 10uM or explicitly reported as active by ChEMBL are flagged as active in this PubChem assay presentation.

Journal: Bioorg. Med. Chem.
Year: 2012
Volume: 20
Issue: 17
First Page: 5181
Last Page: 5187
DOI: 10.1016/j.bmc.2012.07.006
PubChem Standard ValueStandard TypeStandard RelationStandard ValueStandard UnitsData Validity Comment
0.04Ki=40nM
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:NCGC 靶标:
External ID: s-sky_synergy-MV-411_N-CTG72-MIPE_NPC_NPACT_Kinase-p1
Protocol: PROTOCOL TABLE
SEQUENCE No. (e.g., 1, 2, 3, etc.); PARAMETER (e.g., Cells, Incubation, Reagent, etc.); VALUE; DESCRIPTION.
1; Media; 2uL; white, solid-bottom Corning assay plate.
2; Compounds; 23nL; Echo acoustic dispenser.
3; Cell; 5uL; 500 cells per well.
4: Incubation; 72hr; 37 C, 5% CO2, 95% humidity.
5; Reagent; 3uL; CellTiter-Glo reagent (Promega).
6; Incubation; 10min; room temperature.
7; Detection; Luminescence; ViewLux plate reader (PerkinElmer).

NOTES (numbers refer to Sequence numbers above
1. Quantitative high-throughput screening (qHTS) of small molecule compounds was conducted on naive SYKi MV4-11 cell line. Briefly, 2uL growth media (RPMI 1640 + 1% penicillin/streptomycin + 10% FBS) were added into an assay plate using a Multidrop Combi dispenser (Thermo Fisher Scientific).
2. Twenty-three nanoliter of small molecule compounds were added to each assay plates using the Echo acoustic dispenser (Beckman Coulter).
3. Cells were seeded into the assay plates at a final density of 500 cells in 5uL of media per well using the Multi-drop Combi dispenser.
4. Plates were covered with stainless steel gasketed lids and incubated for 72 hours at standard cell culture conditions.
5. Viability was assessed by adding 3uL of CellTiter-Glo detection reagent (Promega).
6. Plates were covered with gasket lids and incubated for 10 minutes at room temperature.
7. Luminescence was measured on a ViewLux plate reader (PerkinElmer).
Comment: Disclaimer:
Although all reasonable efforts have been made to ensure the accuracy and reliability of the data, caution should be exercised when interpreting the results as artifacts are possible from nonspecific effects such as assay signal interference. The curve fitting and activity calls presented here are based on the NCATS analysis methods [1].

Compound Ranking:
1. Compounds are first classified as having full titration curves, partial modulation, partial curve (weaker actives), single point activity (at highest concentration only), or inactive. For this assay, apparent cytotoxic compounds are ranked higher than compounds that showed no activity.
2. For all inactive compounds, with a ratio activity curve class of 4, PUBCHEM_ACTIVITY_SCORE is 0. For all active compounds, a score range was given for each curve class type given above. Active compounds have PUBCHEM_ACTIVITY_SCORE between 40 and 100. For a ratio activity curve class = -1.1, score = 80+abs((log_ac50+4.5)*inf_activity/20). For ratio.curve_class == -1.2 && abs(ratio.max_response) > 6*10, score = 60+abs((log_ac50+4.5)*inf_activity/20). For ratio.curve_class == -2.1 || ( ratio.curve_class==-2.2 && abs(ratio.max_response) > 6*10), score = 40+abs((log_ac50+4.5)*inf_activity/20). For ratio.curve_class == -1.2 || ratio.curve_class == -2.2, score = 20+abs((log_ac50+4.5)*inf_activity/20). Inconclusive compounds, with a donor curve class other than 4, have PUBCHEM_ACTIVITY_SCORE of 10. Inconclusive compounds have PUBCHEM_ACTIVITY_SCORE between 1 and 39.

Reference:
1. Inglese J, Auld DS, Jadhav A, et al. Quantitative high-throughput screening: a titration-based approach that efficiently identifies biological activities in large chemical libraries. Proc Natl Acad Sci U S A. 2006;103(31):11473-11478.
PhenotypePotencyEfficacyAnalysis CommentActivity_ScoreCurve_DescriptionFit_LogAC50Fit_HillSlopeFit_R2Fit_InfiniteActivityFit_ZeroActivityFit_CurveClassExcluded_PointsMax_ResponseActivity at 0.0000062652 uMActivity at 0.0000234000 uMActivity at 0.0000299754 uMActivity at 0.0000680318 uMActivity at 0.0001469781 uMActivity at 0.0003237363 uMActivity at 0.0006761082 uMActivity at 0.00130 uMActivity at 0.00271 uMActivity at 0.00486 uMActivity at 0.00759 uMActivity at 0.016 uMActivity at 0.038 uMActivity at 0.071 uMActivity at 0.177 uMActivity at 0.356 uMActivity at 0.588 uMActivity at 1.402 uMActivity at 1.903 uMActivity at 4.972 uMActivity at 9.253 uMActivity at 17.29 uMActivity at 44.98 uMActivity at 91.90 uMActivity at 155.1 uMActivity at 231.0 uMCompound QC
Cytotoxic0.016689.527684Complete curve; high efficacy-7.77952.09370.944225.8586115.3863-1.10 0 0 0 0 0 0 0 0 0 05.6755108.6505117.9375108.116652.745348.993823.989228.850825.686529.035727.31935.6755QC'd by MedChem Express
Cytotoxic0.0281.223183Complete curve; high efficacy-7.69920.80.972316.819798.0429-1.10 0 0 0 0 0 08.45590.219374.545244.291328.140927.05921.55068.455QC'd by Analyticon
Cytotoxic0.032686.593783Complete curve; high efficacy-7.48620.70.95318.8792105.4729-1.10 0 0 0 0 0 08.453296.808473.066745.439734.552529.766627.43068.4532QC'd by MedChem Express
Cytotoxic0.01683.312682Complete curve; high efficacy-7.79644.95490.99689.607592.9201-1.10 0 0 0 0 0 0 09.777389.297696.418711.99539.71678.86779.754210.35039.7773QC'd by LightBiologicals
Cytotoxic0.010694.295182Complete curve; high efficacy-7.9753.1320.995511.6947105.9898-1.10 0 0 0 0 0 0 011.6947100.9198109.394435.824211.756910.793412.383613.314511.6947QC'd by Prestwick
Cytotoxic0.002788.975382Complete curve; high efficacy-8.5754.95490.99928.907497.8826-1.10 0 0 0 0 0 0 06.903497.991442.29369.96869.10388.22179.30529.09336.9034QC'd by Alfa Aesar
Cytotoxic0.008480.513982Complete curve; high efficacy-8.0754.95490.99738.893889.4076-1.10 0 0 0 0 0 0 06.357787.157291.349912.957111.042110.34028.91169.86186.3577QC'd by Bosche
Cytotoxic0.005197.54282Complete curve; high efficacy-8.2944.50450.99928.7153106.2574-1.10 0 0 0 0 0 07.9842105.047213.76299.49049.84647.65467.1497.9842QC'd by Selleck
Cytotoxic0.020694.499882Complete curve; high efficacy-7.68624.0950.998411.2634105.7632-1.10 0 0 0 0 0 010.8677105.387387.541714.414211.97659.14619.209710.8677QC'd by Selleck
Cytotoxic0.461193.529282Complete curve; high efficacy-6.33621.46410.963718.0367111.5659-1.10 0 0 0 0 0 06.0375113.1729110.6758104.027672.57924.333235.37316.0375QC'd by ChemieTek
Cytotoxic0.025983.407982Complete curve; high efficacy-7.58621.17050.994210.379993.7878-1.10 0 0 0 0 0 05.519287.484466.342228.540116.433812.144911.87075.5192QC'd by MedChem Express
Cytotoxic0.020680.277982Complete curve; high efficacy-7.68623.67720.970514.587194.865-1.10 0 0 0 0 0 07.291596.26274.959527.541914.606313.184910.65757.2915QC'd by MedChem Express
Cytotoxic0.025999.996582Complete curve; high efficacy-7.58621.11050.962710.993110.9895-1.10 0 0 0 0 0 03.5224101.819278.672730.344220.104225.11194.47963.5224QC'd by APExBIO
Cytotoxic0.014690.789582Complete curve; high efficacy-7.83621.34370.9969.109499.8989-1.10 0 0 0 0 0 06.212391.419653.831819.277613.66628.56187.43726.2123QC'd by APExBIO
Cytotoxic0.651381.720382Complete curve; high efficacy-6.18621.47870.989621.402103.1224-1.10 0 0 0 0 0 021.0506108.908195.7413101.202878.035734.663424.989321.0506QC'd by Glixx
Cytotoxic0.01384.007482Complete curve; high efficacy-7.88621.41630.994410.069994.0773-1.10 0 0 0 0 0 05.978686.088247.355717.899613.582410.519910.4225.9786QC'd by MedChem Express
Cytotoxic0.08285.068682Complete curve; high efficacy-7.08620.910.991514.09999.1676-1.10 0 0 0 0 0 010.217194.606584.923959.808127.552123.690516.789310.2171QC'd by Glixx
Cytotoxic0.006584.635382Complete curve; high efficacy-8.18624.0950.99828.850193.4854-1.10 0 0 0 0 0 06.501790.372511.997510.293910.1119.52798.25216.5017QC'd by APExBIO
Cytotoxic0.00982.724382Complete curve; high efficacy-8.0441.28760.991710.51293.2363-1.10 0 0 0 0 0 07.734485.514346.479122.47513.19099.748711.73337.7344QC'd by MedChem Express
Cytotoxic4.0E-494.19682Complete curve; high efficacy-9.3752.40640.99887.7324101.9284-1.10 0 0 0 0 0 07.3587100.769474.71979.88399.60588.64768.49037.3587QC'd by SIGMA
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:BindingDB 靶标:N/A
External ID: BindingDB_3569_1
Protocol: N/A
Comment: Compounds with any of Ki, IC50, Kd, or EC50 activity value <= 10uM are labeled as "Active".
If multiple measurements are available for a given compound, it is labeled as "Active" if any of the measurements meet the criterion. Activity values are checked in the order of Ki, IC50, Kd, and EC50. The first entry that meets the above activity threshold is used to determine "Standard Type", "Standard Relation", and "PubChem Standard Value". Otherwise, the first non-empty entry will be used to set those values.
Standard TypePubChem Standard ValueKiTarget Accession(s)LigandTarget
Ki2.08E-40.208P0AF12BDBM364365'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:ChEMBL 靶标:Acinetobacter baumannii
External ID: CHEMBL4296188
Protocol: N/A
Comment: Compounds with activity <= 10uM or explicitly reported as active by ChEMBL are flagged as active in this PubChem assay presentation.

Target ChEMBL ID: CHEMBL614425
ChEMBL Target Name: Acinetobacter baumannii
ChEMBL Target Type: ORGANISM - Target is a complete organism
Relationship Type: N - Non-molecular target assigned
Confidence: Target assigned is non-molecular

Data Source: CO-ADD Antimicrobial Screening
PubChem Standard ValueStandard TypeStandard RelationStandard ValueStandard UnitsActivity CommentData Validity Comment
10MIC>10000nMMedian N= 2; Maxinhib 10.4 Pct
20MIC>20000nMMedian N= 2; Maxinhib 10.3 Pct
5MIC=5000nMMedian N= 2
Inhibition=22.02%Average; N=2
10MIC>10000nMMedian N= 2; Maxinhib 7.2 Pct
Inhibition=0.29%Average; N=2
Inhibition=13.44%Average; N=2
Inhibition=15.75%Average; N=2
Inhibition=30.31%Average; N=2
20MIC>20000nMMedian N= 2; Maxinhib 19.9 Pct
10MIC>10000nMMedian N= 2; Maxinhib 13.5 Pct
Inhibition=12.68%Average; N=2
Inhibition=8.04%Average; N=2
Inhibition=21.28%Average; N=2
20MIC>20000nMMedian N= 2; Maxinhib 17.6 Pct
10MIC>10000nMMedian N= 2; Maxinhib 10.9 Pct
20MIC>20000nMMedian N= 2; Maxinhib 24.8 Pct
Inhibition=19.94%Average; N=2
10MIC>10000nMMedian N= 2; Maxinhib 15.2 Pct
Inhibition=19.7%Average; N=2
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:ChEMBL 靶标:Pseudomonas aeruginosa
External ID: CHEMBL4296187
Protocol: N/A
Comment: Compounds with activity <= 10uM or explicitly reported as active by ChEMBL are flagged as active in this PubChem assay presentation.

Target ChEMBL ID: CHEMBL348
ChEMBL Target Name: Pseudomonas aeruginosa
ChEMBL Target Type: ORGANISM - Target is a complete organism
Relationship Type: N - Non-molecular target assigned
Confidence: Target assigned is non-molecular

Data Source: CO-ADD Antimicrobial Screening
PubChem Standard ValueStandard TypeStandard RelationStandard ValueStandard UnitsActivity CommentData Validity Comment
Inhibition=10.84%Average; N=1
Inhibition=14.55%Average; N=1
Inhibition=-13.46%Average; N=1Outside typical range
Inhibition=21.47%Average; N=2
Inhibition=32.07%Average; N=1
Inhibition=2.27%Average; N=1
Inhibition=-21.74%Average; N=1Outside typical range
Inhibition=9.41%Average; N=1
Inhibition=19.34%Average; N=1
Inhibition=-25.08%Average; N=1Outside typical range
Inhibition=9.21%Average; N=4
Inhibition=15.98%Average; N=4
Inhibition=8.03%Average; N=1
Inhibition=-1.26%Average; N=1
Inhibition=6.81%Average; N=1
Inhibition=-8.48%Average; N=1
Inhibition=25.25%Average; N=1
Inhibition=44.67%Average; N=1
Inhibition=1.69%Average; N=1
Inhibition=2.93%Average; N=1
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:ChEMBL 靶标:Cryptococcus neoformans
External ID: CHEMBL4296190
Protocol: N/A
Comment: Compounds with activity <= 10uM or explicitly reported as active by ChEMBL are flagged as active in this PubChem assay presentation.

Target ChEMBL ID: CHEMBL365
ChEMBL Target Name: Cryptococcus neoformans
ChEMBL Target Type: ORGANISM - Target is a complete organism
Relationship Type: N - Non-molecular target assigned
Confidence: Target assigned is non-molecular

Data Source: CO-ADD Antimicrobial Screening
PubChem Standard ValueStandard TypeStandard RelationStandard ValueStandard UnitsActivity CommentData Validity Comment
10MIC>10000nMMedian N= 2; Maxinhib 9.6 Pct
Inhibition=-7.36%Average; N=2; Conc=25 Um ;
20MIC>20000nMMedian N= 2; Maxinhib 17.1 Pct
10MIC>10000nMMedian N= 2; Maxinhib 6.5 Pct
Inhibition=-5.61%Average; N=2
10MIC>10000nMMedian N= 2; Maxinhib 7.2 Pct
Inhibition=-0.18%Average; N=2
Inhibition=-8.54%Average; N=2
Inhibition=-5.03%Average; N=2
Inhibition=-1.5%Average; N=2
20MIC>20000nMMedian N= 2; Maxinhib 8.8 Pct
0.1563MIC=156.3nMMedian N= 2
Inhibition=-9.6%Average; N=2; Conc=25 Um ;
Inhibition=-0.09%Average; N=2
Inhibition=-3.07%Average; N=2
Inhibition=-2.97%Average; N=2
20MIC>20000nMMedian N= 2; Maxinhib 9.3 Pct
Inhibition=-12.66%Average; N=2; Conc=25 Um ;Outside typical range
10MIC>10000nMMedian N= 2; Maxinhib 4.5 Pct
20MIC>20000nMMedian N= 2; Maxinhib 9.3 Pct
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:ChEMBL 靶标:N/A
External ID: CHEMBL2073515
Protocol: N/A
Comment: Compounds with activity <= 10uM or explicitly reported as active by ChEMBL are flagged as active in this PubChem assay presentation.

Journal: Bioorg. Med. Chem.
Year: 2012
Volume: 20
Issue: 17
First Page: 5181
Last Page: 5187
DOI: 10.1016/j.bmc.2012.07.006
PubChem Standard ValueStandard TypeStandard RelationStandard ValueStandard UnitsActivity Comment
0.036Ki=36nM
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:NCGC 靶标:
External ID: NTMT1-p-MTaseGlo
Protocol: Materials: NTMT1 enzyme, substrate SPKRIA, control peptide RCC1-6 is provided by the Huang laboratory.

MTaseGlo Assay:
PROTOCOL TABLE
SEQUENCE No. (e.g., 1, 2, 3, etc.); PARAMETER (e.g., Cells, Incubation, Reagent, etc.); VALUE; DESCRIPTION
1; Enzyme; 3 uL; Dispense enzyme mixture (final concentrations of 125 nM NTMT1 and 100 uM SAM) into Greiner 1536-well white / solid bottom assay plate (Greiner Bio One, Monroe, NC).
2; Compounds; 23 nL; Compounds and controls were transferred via a Kalypsys Pin Tool (Wako USA) equipped with a 1536-slotted pin array (Wako Automation, Richmond, VA)
3; Incubation; 15 min; Incubate at room temperature
4; Substrate; 1 uL; Dispense 1 uL of substrate at final concentration of 1 uM. Buffer solution was dispensed in control wells. The assay plate was covered with metal lids.
5; Incubation; 30 min; Incubate at room temperature, protected from lights.
6; Reagent; 1 uL; Dispensed 5x MTase-Glo detection reagent (R) into the assay plate. The plate was covered with metal lids.
7; Incubation; 30 min; Incubate the assay plates at room temperature in the dark to allow for SAH to be converted to ADP.
8; Reagent; 5 uL; Dispense 5 uL of 1x MTase-Glo Detection Solution (R) to allow for ADP to be converted to ATP which was then detected with a luciferase reaction.
9; Centrifuge; 15 sec; Centrifuge the assay plate for 15 seconds at 1000 RPM.
10; Incubation; 30 min; Assay plates were incubation at room temperature in the dark.
11; Detection; Luminescence; Plates were read on ViewLux detector (PerkinElmer). Data were normalized to no-enzyme (0% activity) and no-inhibitor (DMSO; 100%) controls, and the resulting percent inhibition data were fitted to a 4-parameter Hill equation using GraphPad Prism.
Comment: Disclaimer:
Although all reasonable efforts have been made to ensure the accuracy and reliability of the data, caution should be exercised when interpreting the results as artifacts are possible from nonspecific effects such as assay signal interference. The curve fitting and activity calls presented here are based on the NCATS analysis methods.

Compound Ranking:
1. Compounds are first classified as having full titration curves, partial modulation, partial curve (weaker actives), single point activity (at highest concentration only), or inactive. For this assay, apparent inhibitors are ranked higher than compounds that showed apparent activation.
2. For all inactive compounds, with a ratio activity curve class of 4, PUBCHEM_ACTIVITY_SCORE is 0. For all active compounds, a score range was given for each curve class type given above. Active compounds have PUBCHEM_ACTIVITY_SCORE between 40 and 100. For a ratio activity curve class = -1.1, score = 80+abs((log_ac50+4.5)*inf_activity/20). For ratio.curve_class == -1.2 && abs(ratio.max_response) > 6*10, score = 60+abs((log_ac50+4.5)*inf_activity/20). For ratio.curve_class == -2.1 || ( ratio.curve_class==-2.2 && abs(ratio.max_response) > 6*10), score = 40+abs((log_ac50+4.5)*inf_activity/20). For ratio.curve_class == -1.2 || ratio.curve_class == -2.2, score = 20+abs((log_ac50+4.5)*inf_activity/20). Inconclusive compounds, with a donor curve class other than 4, have PUBCHEM_ACTIVITY_SCORE of 10. Inconclusive compounds have PUBCHEM_ACTIVITY_SCORE between 1 and 39.
PhenotypePotencyEfficacyAnalysis CommentActivity_ScoreCurve_DescriptionFit_LogAC50Fit_HillSlopeFit_R2Fit_InfiniteActivityFit_ZeroActivityFit_CurveClassExcluded_PointsMax_ResponseActivity at 0.0000420468 uMActivity at 0.0001060182 uMActivity at 0.0001893301 uMActivity at 0.0004489405 uMActivity at 0.0009664426 uMActivity at 0.00171 uMActivity at 0.00292 uMActivity at 0.00536 uMActivity at 0.00931 uMActivity at 0.020 uMActivity at 0.041 uMActivity at 0.085 uMActivity at 0.146 uMActivity at 0.251 uMActivity at 0.501 uMActivity at 1.073 uMActivity at 2.225 uMActivity at 4.221 uMActivity at 6.452 uMActivity at 12.64 uMActivity at 29.84 uMActivity at 57.50 uMActivity at 114.0 uMActivity at 227.6 uMActivity at 379.2 uMActivity at 573.0 uMCompound QC
Inactive0004-8.3336-1.4117-0.6141-1.80790.0446-8.3336QC'd by Sytravon
Inactive0-5.754.95490.364-29.48243.380540 0 0 0 1-1.39543.25350.7839-59.13736.0E-4-1.3954QC'd by Sytravon
Inactive0-6.753.1320.78430.870212.540 0 0 0 04.496310.2975-0.4426-1.35820.16264.4963QC'd by Sytravon
Inactive00042.0548-1.7066-2.8833-2.0050.36932.0548QC'd by Sytravon
Inactive0004-5.64220.4339-3.0268-4.4255-2.8516-5.6422QC'd by Sytravon
Inactive00040.2315-0.9193-0.962513.7196-1.97040.2315QC'd by Sytravon
Inactive0-5.054.95490.5023-0.05257.540 0 0 0 15.3132.711112.72021.5451-0.04385.313QC'd by Sytravon
Inactive00044.3883-3.3207-0.3808-0.1461-2.9714.3883QC'd by Sytravon
Inactive00045.7635-0.6995-1.72946.10241.83175.7635QC'd by Sytravon
Inactive0-4.31.06930.8616-4.25739.540 0 0 0 0-1.881111.14848.55025.98854.608-1.8811QC'd by Sytravon
Inactive0004-1.7273-3.4115-0.1881-2.6331-1.6916-1.7273QC'd by Sytravon
Inactive00044.3895-3.0627-1.10014.78020.86424.3895QC'd by Sytravon
Inactive0-54.95490.664910.50.702140 0 0 0 013.78374.4863-3.58167.22047.367813.7837QC'd by Sytravon
Inactive00046.01793.3436.89312.29364.52246.0179QC'd by Sytravon
Inactive000411.32073.08785.1642.55725.361511.3207QC'd by Sytravon
Inactive00048.73833.26642.73073.24051.84638.7383QC'd by Sytravon
Inactive0-4.052.72020.9497-18.9142-2.292240 0 0 0 0-14.0952-1.0768-4.0059-2.4795-5.6228-14.0952QC'd by Sytravon
Inactive0004-7.7765-2.2569-3.9959-1.34510.1566-7.7765QC'd by Sytravon
Inactive0-44.95490.7054-25.0658-0.540 0 0 0 0-17.5549-2.6051-3.8192-2.69936.0774-17.5549QC'd by Sytravon
Inactive0-5.84.95490.4109-5.3905440 0 0 0 0-2.49043.8042.4492-14.07540.8551-2.4904QC'd by Sytravon
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:ChEMBL 靶标:Candida albicans
External ID: CHEMBL4296189
Protocol: N/A
Comment: Compounds with activity <= 10uM or explicitly reported as active by ChEMBL are flagged as active in this PubChem assay presentation.

Target ChEMBL ID: CHEMBL366
ChEMBL Target Name: Candida albicans
ChEMBL Target Type: ORGANISM - Target is a complete organism
Relationship Type: N - Non-molecular target assigned
Confidence: Target assigned is non-molecular

Data Source: CO-ADD Antimicrobial Screening
PubChem Standard ValueStandard TypeStandard RelationStandard ValueStandard UnitsActivity Comment
10MIC>10000nMMedian N= 2; Maxinhib 3.0 Pct
Inhibition=8.04%Average; N=2; Conc=25 Um ;
20MIC>20000nMMedian N= 2; Maxinhib 7.4 Pct
10MIC>10000nMMedian N= 2; Maxinhib 4.8 Pct
Inhibition=3.92%Average; N=2
10MIC>10000nMMedian N= 2; Maxinhib 10.4 Pct
Inhibition=-0.23%Average; N=2
Inhibition=0.3%Average; N=2
Inhibition=-0.48%Average; N=2
Inhibition=2.62%Average; N=2
20MIC>20000nMMedian N= 2; Maxinhib 8.0 Pct
0.0781MIC<=78.1nMMedian N= 2
Inhibition=-3.39%Average; N=2; Conc=25 Um ;
Inhibition=5.22%Average; N=2
Inhibition=3.37%Average; N=2
Inhibition=4.56%Average; N=2
20MIC>20000nMMedian N= 2; Maxinhib 3.4 Pct
Inhibition=-0.73%Average; N=2; Conc=25 Um ;
10MIC>10000nMMedian N= 2; Maxinhib 7.9 Pct
20MIC>20000nMMedian N= 2; Maxinhib 1.4 Pct
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:ChEMBL 靶标:5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
External ID: CHEMBL1244603
Protocol: N/A
Comment: Journal: Nat. Chem. Biol.
Year: 2009
Volume: 5
Issue: 4
First Page: 251
Last Page: 257
DOI: 10.1038/nchembio.153

Target ChEMBL ID: CHEMBL1250374
ChEMBL Target Name: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
ChEMBL Target Type: SINGLE PROTEIN - Target is a single protein chain
Relationship Type: H - Homologous protein target assigned
Confidence: Homologous single protein target assigned
Standard TypeStandard UnitsActivity Comment
Inhibition%Active
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:ChEMBL 靶标:S-methyl-5'-thioadenosine phosphorylase
External ID: CHEMBL2073357
Protocol: N/A
Comment: Compounds with activity <= 10uM or explicitly reported as active by ChEMBL are flagged as active in this PubChem assay presentation.

Journal: Bioorg. Med. Chem.
Year: 2012
Volume: 20
Issue: 17
First Page: 5181
Last Page: 5187
DOI: 10.1016/j.bmc.2012.07.006

Target ChEMBL ID: CHEMBL4941
ChEMBL Target Name: S-methyl-5-thioadenosine phosphorylase
ChEMBL Target Type: SINGLE PROTEIN - Target is a single protein chain
Relationship Type: D - Direct protein target assigned
Confidence: Direct single protein target assigned
PubChem Standard ValueStandard TypeStandard RelationStandard ValueStandard Units
0.602Ki=602nM
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:ChEMBL 靶标:N/A
External ID: CHEMBL4341237
Protocol: N/A
Comment: Journal: J Med Chem
Year: 2019
Volume: 62
Issue: 7
First Page: 3286
Last Page: 3296
DOI: 10.1021/acs.jmedchem.8b01642
Standard TypeStandard RelationStandard ValueStandard Units
Kieq=86pM
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:ChEMBL 靶标:Pseudomonas aeruginosa
External ID: CHEMBL4296802
Protocol: N/A
Comment: Compounds with activity <= 10uM or explicitly reported as active by ChEMBL are flagged as active in this PubChem assay presentation.

Target ChEMBL ID: CHEMBL348
ChEMBL Target Name: Pseudomonas aeruginosa
ChEMBL Target Type: ORGANISM - Target is a complete organism
Relationship Type: N - Non-molecular target assigned
Confidence: Target assigned is non-molecular

Data Source: CO-ADD Antimicrobial Screening
PubChem Standard ValueStandard TypeStandard RelationStandard ValueStandard UnitsActivity CommentData Validity Comment
Inhibition=-33.42%Average; N=1Outside typical range
Inhibition=1.44%Average; N=1
Inhibition=-11.05%Average; N=1Outside typical range
Inhibition=19.22%Average; N=1
Inhibition=-31.54%Average; N=1Outside typical range
Inhibition=-12.91%Average; N=1Outside typical range
Inhibition=12.18%Average; N=1
Inhibition=-14.83%Average; N=1Outside typical range
Inhibition=17.54%Average; N=1
Inhibition=-38.58%Average; N=1Outside typical range
Inhibition=-10.22%Average; N=1Outside typical range
Inhibition=14%Average; N=1
Inhibition=1.67%Average; N=1
Inhibition=14.76%Average; N=1
Inhibition=-28.2%Average; N=1Outside typical range
Inhibition=13.08%Average; N=1
Inhibition=3.75%Average; N=1
Inhibition=10.88%Average; N=1
Inhibition=-0.78%Average; N=1
Inhibition=-7.12%Average; N=1
HepG2 Cytotoxicity Assay Measured in Cell-Based System Using Plate Reader - 7071-02_Inhibitor_Dose_DryPowder_Activity_Set16
来源:ChEMBL 靶标:Erythrocyte
External ID: CHEMBL4296784
Protocol: N/A
Comment: Compounds with activity <= 10uM or explicitly reported as active by ChEMBL are flagged as active in this PubChem assay presentation.

Target ChEMBL ID: CHEMBL4296518
ChEMBL Target Name: Erythrocyte
ChEMBL Target Type: CELL-LINE - Target is a specific cell-line
Relationship Type: N - Non-molecular target assigned
Confidence: Target assigned is non-molecular

Data Source: CO-ADD Antimicrobial Screening
PubChem Standard ValueStandard TypeStandard RelationStandard ValueStandard UnitsActivity Comment
20HC10>20uMMedian N= 2; Maxinhib 9.1 Pct
20HC10>20uMMedian N= 2; Maxinhib 1.0 Pct
20HC10>20uMMedian N= 2; Maxinhib 7.0 Pct
20HC10>20uMMedian N= 2; Maxinhib 5.3 Pct
20HC10>20uMMedian N= 2; Maxinhib 2.5 Pct
20HC10>20uMMedian N= 2; Maxinhib 3.3 Pct
20HC10>20uMMedian N= 2; Maxinhib 3.5 Pct
20HC10>20uMMedian N= 2; Maxinhib 3.4 Pct
10HC10>10uMMedian N= 2; Maxinhib 1.6 Pct
20HC10>20uMMedian N= 2; Maxinhib 6.2 Pct
20HC10>20uMMedian N= 2; Maxinhib 20.2 Pct
20HC10>20uMMedian N= 2; Maxinhib 1.8 Pct
20HC10>20uMMedian N= 2; Maxinhib 5.9 Pct
20HC10>20uMMedian N= 2; Maxinhib 3.4 Pct
20HC10>20uMMedian N= 2; Maxinhib 8.2 Pct
20HC10>20uMMedian N= 2; Maxinhib 3.2 Pct
20HC10>20uMMedian N= 2; Maxinhib 9.3 Pct
20HC10>20uMMedian N= 2; Maxinhib 7.8 Pct
20HC10>20uMMedian N= 2; Maxinhib 1.6 Pct
10HC10>10uMMedian N= 2; Maxinhib 10.1 Pct