Crebinostat

Modify Date: 2025-08-24 23:24:47

Crebinostat Structure
Crebinostat structure
Common Name Crebinostat
CAS Number 1092061-61-4 Molecular Weight 353.415
Density 1.2±0.1 g/cm3 Boiling Point N/A
Molecular Formula C20H23N3O3 Melting Point N/A
MSDS N/A Flash Point N/A

 Use of Crebinostat


Crebinostat is a potent histone deacetylase (HDAC) inhibitor with IC50 values of 0.7 nM, 1.0 nM, 2.0 nM and 9.3 nM for HDAC1, HDAC2, HDAC3 and HDAC6, respectively. Crebinostat potently induces acetylation of both histone H3 and histone H4 as well as enhances the expression of the cAMP response element-binding protein (CREB) target gene Egr1. Crebinostat increases the density of synapsin-1 punctae along dendrites in cultured neurons. Crebinostat can modulate chromatin-mediated neuroplasticity and exhibits enhanced memory in mice[1].

 Names

Name 7-[2-(4-Biphenylylmethylene)hydrazino]-N-hydroxy-7-oxoheptanamide
Synonym More Synonyms

 Crebinostat Biological Activity

Description Crebinostat is a potent histone deacetylase (HDAC) inhibitor with IC50 values of 0.7 nM, 1.0 nM, 2.0 nM and 9.3 nM for HDAC1, HDAC2, HDAC3 and HDAC6, respectively. Crebinostat potently induces acetylation of both histone H3 and histone H4 as well as enhances the expression of the cAMP response element-binding protein (CREB) target gene Egr1. Crebinostat increases the density of synapsin-1 punctae along dendrites in cultured neurons. Crebinostat can modulate chromatin-mediated neuroplasticity and exhibits enhanced memory in mice[1].
Related Catalog
Target

HDAC1:0.7 nM (IC50)

HDAC2:1.0 nM (IC50)

HDAC3:2.0 nM (IC50)

HDAC6:9.3 nM (IC50)

In Vitro Crebinostat (1 μM; 24 h) induces acetylation of AcH4K12 and AcH3K9 in mouse primary neuronal cells[1]. Crebinostat (1 μM; 24 h) downregulates Mapt mRNA expression, and upregulates Hspa1b (Hsp70) and Bdnf mRNA expression in mouse primary cultured neurons[1]. Crebinostat (1 μM; 24 h) increases histone acetylation and synapsin I punctae along dendrites in primary cultured neurons[1]. Western Blot Analysis[1] Cell Line: Mouse primary neuronal cells (dissociated from E17 embryonic mouse forebrain) Concentration: 1 μM Incubation Time: 24 h Result: Induced robust acetylation of AcH4K12 and AcH3K9 in a dose dependent manner with EC50s of 0.29 μM and 0.18 μM.
In Vivo Crebinostat (25 mg/kg; IP; for 10 days) enhances memory of contextual fear conditioning in mice; induces an increase in total hippocampal acetylation of H4K12 and H3K9[1]. Animal Model: Male C57BL/6J mice (9-10 weeks)[1] Dosage: 25 mg/kg Administration: IP; alternate daily between left and right sides of the abdomen, for 10 days Result: Enhanced memory of contextual fear conditioning in mice; induced a trend towards an increase in total hippocampal acetylation of both H4K12 and H3K9.
References

[1]. Fass DM, et al. Crebinostat: a novel cognitive enhancer that inhibits histone deacetylase activity and modulates chromatin-mediated neuroplasticity. Neuropharmacology. 2013 Jan;64:81-96.

 Chemical & Physical Properties

Density 1.2±0.1 g/cm3
Molecular Formula C20H23N3O3
Molecular Weight 353.415
Exact Mass 353.173950
LogP 2.87
Index of Refraction 1.583
InChIKey AEIVDBATQVVQFS-RCCKNPSSSA-N
SMILES O=C(CCCCCC(=O)NN=Cc1ccc(-c2ccccc2)cc1)NO

 Synonyms

Heptanoic acid, 7-(hydroxyamino)-7-oxo-, 2-([1,1'-biphenyl]-4-ylmethylene)hydrazide
7-[2-(4-Biphenylylmethylene)hydrazino]-N-hydroxy-7-oxoheptanamide
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