Engineering D-amino acid containing novel protease inhibitors using catalytic site architecture

…, E Poduch, BM Mannargudi, K Majumder, L Wei…

Index: Annedi, Subhash C.; Biabani, Farooq; Poduch, Ewa; Mannargudi, Baskar M.; Majumder, Kanchana; Wei, Lianhu; Khayat, Reza; Tong, Liang; Kotra, Lakshmi P. Bioorganic and Medicinal Chemistry, 2006 , vol. 14, # 1 p. 214 - 236

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Citation Number: 14

Abstract

The mechanism of proteolysis by serine proteases is a reasonably well-understood process. Typically, a histidine residue acting as a general base deprotonates the catalytic serine residue and the hydrolytic water molecule. We disclose here, the use of an unnatural d- amino acid as a strategic residue in P1 position, designed de novo based on the architecture of the protease catalytic site to impede the catalytic histidine residue at the ...